Genomic map of Mycobacterium phage Bipolar (NC_028823)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028823
Definition
Mycobacterium phage Bipolar, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
REFSEQ
Length
58985
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
106
%GC
61.37
Number of singletons
3
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009200690.1 NC_028823_p63 hypothetical protein phrog_5168 unknown function unknown function 1 41255 41719
YP_009200721.1 NC_028823_p94 hypothetical protein phrog_2247 unknown function unknown function 1 53317 53586
YP_009200668.1 NC_028823_p41 immunity repressor phrog_3949 transcriptional repressor transcription regulation -1 33277 33810
YP_009200672.1 NC_028823_p45 hypothetical protein phrog_2025 unknown function unknown function 1 36067 36282
YP_009200681.1 NC_028823_p54 hypothetical protein phrog_1849 unknown function unknown function 1 38577 38858
YP_009200662.1 NC_028823_p35 hypothetical protein phrog_1839 unknown function unknown function 1 29571 29663
YP_009200677.1 NC_028823_p50 hypothetical protein phrog_2021 unknown function unknown function 1 37100 37534
YP_009200728.1 NC_028823_p101 hypothetical protein phrog_1385 unknown function unknown function 1 55837 56079
YP_009200659.1 NC_028823_p32 DnaQ-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 28452 29273
YP_009200710.1 NC_028823_p83 hypothetical protein phrog_2591 unknown function unknown function 1 50376 50624
YP_009200724.1 NC_028823_p97 hypothetical protein singleton unknown function unknown function 1 54738 54872
YP_009200654.1 NC_028823_p27 lysin A phrog_700 endolysin lysis 1 25385 26593
YP_009200678.1 NC_028823_p51 hypothetical protein phrog_1816 unknown function unknown function 1 37677 37868
YP_009200727.1 NC_028823_p100 hypothetical protein phrog_1186 unknown function unknown function 1 55427 55840
YP_009200655.1 NC_028823_p28 lysin B phrog_102 endolysin lysis 1 26593 27594
YP_009200661.1 NC_028823_p34 hypothetical protein phrog_1791 unknown function unknown function 1 29357 29578
YP_009200647.1 NC_028823_p20 minor tail protein phrog_553 minor tail protein tail 1 22733 23677
YP_009200726.1 NC_028823_p99 hypothetical protein phrog_1694 unknown function unknown function 1 55233 55430
YP_009200713.1 NC_028823_p86 hypothetical protein phrog_647 unknown function unknown function 1 51239 51601
YP_009200696.1 NC_028823_p69 hypothetical protein phrog_1008 DNA methyltransferase other 1 43797 44348
YP_009200641.1 NC_028823_p14 tapemeasure protein phrog_1942 tail length tape measure protein tail 1 9500 13027
YP_009200673.1 NC_028823_p46 hypothetical protein phrog_5563 unknown function unknown function 1 36279 36377
YP_009200631.1 NC_028823_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3612 4367
YP_009200643.1 NC_028823_p16 minor tail protein phrog_110 minor tail protein tail 1 14807 16516
YP_009200665.1 NC_028823_p38 hypothetical protein singleton unknown function unknown function 1 30922 31101
YP_009200628.1 NC_028823_p1 terminase small subunit phrog_226 minor tail protein tail 1 109 564
YP_009200629.1 NC_028823_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 587 2224
YP_009200718.1 NC_028823_p91 hypothetical protein phrog_6676 unknown function unknown function 1 52574 52972
YP_009200715.1 NC_028823_p88 hypothetical protein phrog_12283 unknown function unknown function 1 51911 52264
YP_009200676.1 NC_028823_p49 hypothetical protein phrog_780 unknown function unknown function 1 36854 37099
YP_009200720.1 NC_028823_p93 hypothetical protein phrog_2278 unknown function unknown function 1 53088 53324
YP_009200651.1 NC_028823_p24 hypothetical protein phrog_28345 unknown function unknown function -1 24802 24915
YP_009200688.1 NC_028823_p61 hypothetical protein phrog_11976 unknown function unknown function 1 40832 40987
YP_009200658.1 NC_028823_p31 hypothetical protein phrog_2004 unknown function unknown function 1 28232 28465
YP_009200722.1 NC_028823_p95 hypothetical protein phrog_908 unknown function unknown function 1 53583 54269
YP_009200692.1 NC_028823_p65 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42690 43052
YP_009200712.1 NC_028823_p85 hypothetical protein phrog_2021 unknown function unknown function 1 50898 51242
YP_009200703.1 NC_028823_p76 DNA methylase phrog_67 DNA methyltransferase other 1 46390 48396
YP_009200640.1 NC_028823_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8545 9096
YP_009200701.1 NC_028823_p74 hypothetical protein phrog_7170 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 45825 46244
YP_009200687.1 NC_028823_p60 hypothetical protein phrog_1834 unknown function unknown function 1 40614 40844
YP_009200697.1 NC_028823_p70 hypothetical protein phrog_2070 unknown function unknown function 1 44365 44526
YP_009200686.1 NC_028823_p59 hypothetical protein phrog_2078 unknown function unknown function 1 40462 40617
YP_009200664.1 NC_028823_p37 hypothetical protein singleton unknown function unknown function -1 30277 30696
YP_009200702.1 NC_028823_p75 hypothetical protein phrog_5921 unknown function unknown function 1 46237 46389
YP_009200633.1 NC_028823_p6 major capsid protein phrog_267 major head protein head and packaging 1 5062 5883
YP_009200650.1 NC_028823_p23 hypothetical protein phrog_411 unknown function unknown function 1 24488 24781
YP_009200729.1 NC_028823_p102 hypothetical protein phrog_2057 unknown function unknown function 1 56072 56233
YP_009200630.1 NC_028823_p3 portal protein phrog_104 portal protein head and packaging 1 2255 3625
YP_009200733.1 NC_028823_p106 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 58515 58841
YP_009200638.1 NC_028823_p11 major tail subunit phrog_476 major tail protein tail 1 7599 8408
YP_009200723.1 NC_028823_p96 hypothetical protein phrog_8604 unknown function unknown function 1 54266 54775
YP_009200707.1 NC_028823_p80 hypothetical protein phrog_1943 unknown function unknown function 1 49707 49901
YP_009200709.1 NC_028823_p82 hypothetical protein phrog_9840 unknown function unknown function 1 50248 50379
YP_009200636.1 NC_028823_p9 head-to-tail connector protein phrog_1929 head-tail connector protein connector 1 6781 7107
YP_009200634.1 NC_028823_p7 head-to-tail connector protein phrog_2377 head-tail adaptor Ad1 connector 1 5883 6449
YP_009200635.1 NC_028823_p8 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 6446 6778
YP_009200719.1 NC_028823_p92 hypothetical protein phrog_4126 unknown function unknown function 1 52963 53091
YP_009200691.1 NC_028823_p64 RecA phrog_1366 unknown function unknown function 1 41716 42693
YP_009200708.1 NC_028823_p81 hypothetical protein phrog_3032 unknown function unknown function 1 49898 50251
YP_009200648.1 NC_028823_p21 hypothetical protein phrog_644 unknown function unknown function 1 23745 24176
YP_009200669.1 NC_028823_p42 HTH domain protein phrog_6267 transcriptional repressor transcription regulation 1 33964 34269
YP_009200698.1 NC_028823_p71 hypothetical protein phrog_1311 unknown function unknown function 1 44507 44659
YP_009200656.1 NC_028823_p29 holin phrog_443 holin lysis 1 27603 27836
YP_009200657.1 NC_028823_p30 hypothetical protein phrog_404 minor tail protein tail 1 27833 28207
YP_009200695.1 NC_028823_p68 hypothetical protein phrog_2704 unknown function unknown function 1 43509 43658
YP_009200667.1 NC_028823_p40 hypothetical protein phrog_1948 unknown function unknown function -1 32565 33017
YP_009200663.1 NC_028823_p36 hypothetical protein phrog_357 transcriptional repressor transcription regulation -1 29711 30223
YP_009200699.1 NC_028823_p72 hypothetical protein phrog_2259 Rnase H DNA, RNA and nucleotide metabolism 1 44668 45300
YP_009200684.1 NC_028823_p57 hypothetical protein phrog_2096 unknown function unknown function 1 39600 40100
YP_009200693.1 NC_028823_p66 hypothetical protein phrog_6938 unknown function unknown function 1 43049 43411
YP_009200714.1 NC_028823_p87 hypothetical protein phrog_1901 unknown function unknown function 1 51633 51914
YP_009200674.1 NC_028823_p47 hypothetical protein phrog_1840 excisionase integration and excision 1 36374 36634
YP_009200666.1 NC_028823_p39 integrase phrog_1 integrase integration and excision 1 31381 32499
YP_009200680.1 NC_028823_p53 hypothetical protein phrog_1797 unknown function unknown function 1 37987 38499
YP_009200670.1 NC_028823_p43 hypothetical protein phrog_15279 unknown function unknown function 1 34287 35264
YP_009200683.1 NC_028823_p56 WhiB phrog_1333 unknown function unknown function 1 39193 39603
YP_009200689.1 NC_028823_p62 hypothetical protein phrog_2632 unknown function unknown function 1 40980 41258
YP_009200660.1 NC_028823_p33 hypothetical protein phrog_8186 unknown function unknown function 1 29257 29370
YP_009200730.1 NC_028823_p103 glycosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 56250 57686
YP_009200652.1 NC_028823_p25 hypothetical protein phrog_1172 unknown function unknown function 1 24931 25083
YP_009200637.1 NC_028823_p10 head-to-tail connector protein phrog_813 head-tail adaptor connector 1 7097 7504
YP_009200642.1 NC_028823_p15 minor tail protein phrog_106 minor tail protein tail 1 13028 14737
YP_009200731.1 NC_028823_p104 hypothetical protein phrog_1693 unknown function unknown function 1 57689 57895
YP_009200706.1 NC_028823_p79 hypothetical protein phrog_7196 unknown function unknown function 1 49519 49710
YP_009200675.1 NC_028823_p48 hypothetical protein phrog_18910 unknown function unknown function 1 36631 36861
YP_009200639.1 NC_028823_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8545 9481
YP_009200649.1 NC_028823_p22 hypothetical protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 24173 24352
YP_009200717.1 NC_028823_p90 hypothetical protein phrog_1545 unknown function unknown function 1 52437 52577
YP_009200645.1 NC_028823_p18 minor tail protein phrog_346 minor tail protein tail 1 17398 19890
YP_009200705.1 NC_028823_p78 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 48531 49382
YP_009200653.1 NC_028823_p26 hypothetical protein phrog_747 unknown function unknown function 1 25134 25388
YP_009200685.1 NC_028823_p58 HTH binding domain protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 40097 40462
YP_009200679.1 NC_028823_p52 hypothetical protein phrog_3381 unknown function unknown function 1 37865 38041
YP_009200644.1 NC_028823_p17 minor tail protein phrog_732 minor tail protein tail 1 16553 17401
YP_009200671.1 NC_028823_p44 hypothetical protein phrog_1033 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 35261 36070
YP_009200716.1 NC_028823_p89 hypothetical protein phrog_1091 unknown function unknown function 1 52261 52440
YP_009200632.1 NC_028823_p5 scaffold protein phrog_2592 head scaffolding protein head and packaging 1 4393 5043
YP_009200725.1 NC_028823_p98 hypothetical protein phrog_1869 unknown function unknown function 1 55063 55227
YP_009200646.1 NC_028823_p19 D-ala-D-ala-carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 19887 22733
YP_009200732.1 NC_028823_p105 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 57892 58515
YP_009200694.1 NC_028823_p67 hypothetical protein phrog_6573 unknown function unknown function 1 43408 43512
YP_009200682.1 NC_028823_p55 hypothetical protein phrog_658 unknown function unknown function 1 38855 39202
YP_009200704.1 NC_028823_p77 hypothetical protein phrog_2451 unknown function unknown function 1 48393 48527
YP_009200700.1 NC_028823_p73 hypothetical protein phrog_2060 DNA methyltransferase other 1 45463 45828
YP_009200711.1 NC_028823_p84 hypothetical protein phrog_647 unknown function unknown function 1 50621 50905