| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028828 |
Definition |
Mycobacterium phage TheloniousMonk, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
REFSEQ |
Length |
52055 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
90 |
%GC |
63.64 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009201020.1 | NC_028828_p7 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 3959 | 4219 |
| YP_009201058.1 | NC_028828_p45 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 33883 | 34368 |
| YP_009201050.1 | NC_028828_p37 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 29707 | 30498 |
| YP_009201077.1 | NC_028828_p64 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | -1 | 42755 | 43165 |
| YP_009201032.1 | NC_028828_p19 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 14195 | 14644 |
| YP_009201049.1 | NC_028828_p36 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 29506 | 29697 |
| YP_009201044.1 | NC_028828_p31 | hypothetical protein | phrog_981 | minor tail protein | tail | 1 | 25043 | 25390 |
| YP_009201027.1 | NC_028828_p14 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 9678 | 11120 |
| YP_009201096.1 | NC_028828_p83 | hypothetical protein | phrog_2093 | unknown function | unknown function | -1 | 49308 | 49460 |
| YP_009201097.1 | NC_028828_p84 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 49457 | 49609 |
| YP_009201045.1 | NC_028828_p32 | hypothetical protein | phrog_1397 | unknown function | unknown function | 1 | 25387 | 25734 |
| YP_009201043.1 | NC_028828_p30 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 24600 | 25046 |
| YP_009201103.1 | NC_028828_p90 | hypothetical protein | phrog_828 | unknown function | unknown function | -1 | 51460 | 51663 |
| YP_009201071.1 | NC_028828_p58 | hypothetical protein | phrog_5801 | unknown function | unknown function | -1 | 41560 | 41634 |
| YP_009201037.1 | NC_028828_p24 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 16832 | 17634 |
| YP_009201076.1 | NC_028828_p63 | hypothetical protein | phrog_2740 | unknown function | unknown function | -1 | 42580 | 42762 |
| YP_009201042.1 | NC_028828_p29 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 22760 | 24562 |
| YP_009201024.1 | NC_028828_p11 | lysin B | phrog_102 | endolysin | lysis | 1 | 6506 | 7474 |
| YP_009201018.1 | NC_028828_p5 | minor tail protein | phrog_1197 | tail protein | tail | 1 | 2164 | 3234 |
| YP_009201086.1 | NC_028828_p73 | exonuclease | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 45711 | 46529 |
| YP_009201029.1 | NC_028828_p16 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 12056 | 12568 |
| YP_009201061.1 | NC_028828_p48 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 36431 | 36922 |
| YP_009201093.1 | NC_028828_p80 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 48783 | 48986 |
| YP_009201072.1 | NC_028828_p59 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 41631 | 41765 |
| YP_009201028.1 | NC_028828_p15 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 11117 | 11998 |
| YP_009201063.1 | NC_028828_p50 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 37098 | 37889 |
| YP_009201084.1 | NC_028828_p71 | hypothetical protein | phrog_2184 | unknown function | unknown function | -1 | 45178 | 45498 |
| YP_009201094.1 | NC_028828_p81 | hypothetical protein | singleton | unknown function | unknown function | -1 | 48983 | 49144 |
| YP_009201064.1 | NC_028828_p51 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 37882 | 38022 |
| YP_009201074.1 | NC_028828_p61 | hypothetical protein | phrog_1019 | unknown function | unknown function | -1 | 42222 | 42308 |
| YP_009201066.1 | NC_028828_p53 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 39742 | 39927 |
| YP_009201057.1 | NC_028828_p44 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 33506 | 33862 |
| YP_009201023.1 | NC_028828_p10 | lysin A | phrog_317 | endolysin | lysis | 1 | 5059 | 6516 |
| YP_009201075.1 | NC_028828_p62 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 42305 | 42583 |
| YP_009201070.1 | NC_028828_p57 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 41399 | 41563 |
| YP_009201083.1 | NC_028828_p70 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 44888 | 45181 |
| YP_009201014.1 | NC_028828_p1 | hypothetical protein | phrog_4649 | unknown function | unknown function | 1 | 599 | 751 |
| YP_009201034.1 | NC_028828_p21 | head-to-tail connector protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 15006 | 15401 |
| YP_009201015.1 | NC_028828_p2 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 748 | 1044 |
| YP_009201041.1 | NC_028828_p28 | minor tail protein | phrog_1543 | minor tail protein | tail | 1 | 22578 | 22760 |
| YP_009201039.1 | NC_028828_p26 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 17647 | 20478 |
| YP_009201053.1 | NC_028828_p40 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 32694 | 32966 |
| YP_009201090.1 | NC_028828_p77 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 47447 | 47959 |
| YP_009201088.1 | NC_028828_p75 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 46696 | 47013 |
| YP_009201091.1 | NC_028828_p78 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 48221 | 48520 |
| YP_009201035.1 | NC_028828_p22 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 15405 | 15851 |
| YP_009201026.1 | NC_028828_p13 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 7993 | 9681 |
| YP_009201060.1 | NC_028828_p47 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 36170 | 36400 |
| YP_009201095.1 | NC_028828_p82 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 49144 | 49311 |
| YP_009201038.1 | NC_028828_p25 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 16832 | 17218 |
| YP_009201101.1 | NC_028828_p88 | hypothetical protein | phrog_31331 | unknown function | unknown function | -1 | 51099 | 51287 |
| YP_009201092.1 | NC_028828_p79 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 48517 | 48786 |
| YP_009201030.1 | NC_028828_p17 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 12579 | 13598 |
| YP_009201054.1 | NC_028828_p41 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 32963 | 33133 |
| YP_009201051.1 | NC_028828_p38 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 30619 | 30915 |
| YP_009201052.1 | NC_028828_p39 | integrase | phrog_95 | integrase | integration and excision | 1 | 31068 | 32570 |
| YP_009201016.1 | NC_028828_p3 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 1079 | 1519 |
| YP_009201078.1 | NC_028828_p65 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 43162 | 43428 |
| YP_009201080.1 | NC_028828_p67 | hypothetical protein | phrog_2507 | unknown function | unknown function | -1 | 44386 | 44559 |
| YP_009201100.1 | NC_028828_p87 | hypothetical protein | phrog_30754 | unknown function | unknown function | -1 | 50896 | 51102 |
| YP_009201067.1 | NC_028828_p54 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 39924 | 40538 |
| YP_009201046.1 | NC_028828_p33 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 25759 | 27612 |
| YP_009201021.1 | NC_028828_p8 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4227 | 4484 |
| YP_009201019.1 | NC_028828_p6 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 3244 | 3945 |
| YP_009201055.1 | NC_028828_p42 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 33130 | 33225 |
| YP_009201085.1 | NC_028828_p72 | hypothetical protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 45502 | 45684 |
| YP_009201099.1 | NC_028828_p86 | hypothetical protein | phrog_33114 | unknown function | unknown function | -1 | 50660 | 50899 |
| YP_009201098.1 | NC_028828_p85 | DNA methylase | phrog_363 | DNA methyltransferase | other | -1 | 49917 | 50510 |
| YP_009201040.1 | NC_028828_p27 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 20502 | 22559 |
| YP_009201069.1 | NC_028828_p56 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 40905 | 41420 |
| YP_009201059.1 | NC_028828_p46 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 34346 | 36133 |
| YP_009201047.1 | NC_028828_p34 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 27605 | 29083 |
| YP_009201017.1 | NC_028828_p4 | hypothetical protein | phrog_2830 | unknown function | unknown function | 1 | 1691 | 1903 |
| YP_009201081.1 | NC_028828_p68 | hypothetical protein | phrog_1690 | unknown function | unknown function | -1 | 44608 | 44778 |
| YP_009201048.1 | NC_028828_p35 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 29176 | 29496 |
| YP_009201068.1 | NC_028828_p55 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 40535 | 41116 |
| YP_009201082.1 | NC_028828_p69 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 44775 | 44891 |
| YP_009201062.1 | NC_028828_p49 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 36919 | 37101 |
| YP_009201025.1 | NC_028828_p12 | HNH endonuclease | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 7471 | 7926 |
| YP_009201087.1 | NC_028828_p74 | hypothetical protein | phrog_2730 | unknown function | unknown function | -1 | 46526 | 46699 |
| YP_009201079.1 | NC_028828_p66 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 43565 | 44386 |
| YP_009201033.1 | NC_028828_p20 | head-to-tail connector protein | phrog_320 | head closure Hc1 | connector | 1 | 14644 | 15006 |
| YP_009201031.1 | NC_028828_p18 | head-to-tail connector protein | phrog_1857 | head-tail connector protein | connector | 1 | 13677 | 14195 |
| YP_009201102.1 | NC_028828_p89 | hypothetical protein | phrog_2212 | unknown function | unknown function | -1 | 51284 | 51367 |
| YP_009201022.1 | NC_028828_p9 | HNH endonuclease | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 4484 | 5062 |
| YP_009201036.1 | NC_028828_p23 | major tail protein | phrog_117 | major tail protein | tail | 1 | 15860 | 16711 |
| YP_009201073.1 | NC_028828_p60 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 41762 | 42235 |
| YP_009201065.1 | NC_028828_p52 | recombination directionality factor | phrog_221 | metallo-phosphoesterase | other | -1 | 38027 | 39745 |
| YP_009201056.1 | NC_028828_p43 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 33222 | 33509 |
| YP_009201089.1 | NC_028828_p76 | repressor | phrog_1809 | unknown function | unknown function | -1 | 47010 | 47405 |