Genomic map of Escherichia phage slur01 (NC_028831)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028831
Definition
Escherichia phage slur01, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Seuratvirus; unclassified Seuratvirus.
DB of origin
REFSEQ
Length
61235
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
90
%GC
44.42
Number of singletons
4
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009201608.1 NC_028831_p65 hypothetical protein phrog_25697 unknown function unknown function 1 45765 45968
YP_009201610.1 NC_028831_p67 hypothetical protein phrog_23919 unknown function unknown function -1 46277 46483
YP_009201606.1 NC_028831_p63 hypothetical protein phrog_8329 unknown function unknown function 1 44952 45482
YP_009201593.1 NC_028831_p50 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 29752 30159
YP_009201622.1 NC_028831_p79 hypothetical protein phrog_23361 unknown function unknown function -1 53368 53925
YP_009201578.1 NC_028831_p35 gp40 [Escherichia phage phiEB49] phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 19624 20115
YP_009201619.1 NC_028831_p76 endonuclease [Salmonella phage Vi06] phrog_1872 endonuclease DNA, RNA and nucleotide metabolism -1 51756 52214
YP_009201599.1 NC_028831_p56 hypothetical protein phrog_2048 tail protein tail 1 36065 36649
YP_009201623.1 NC_028831_p80 hypothetical protein phrog_4899 unknown function unknown function -1 53928 54407
YP_009201550.1 NC_028831_p7 hypothetical protein phrog_2480 unknown function unknown function -1 4842 5252
YP_009201598.1 NC_028831_p55 hypothetical protein phrog_1302 distal tail protein tail 1 35481 36065
YP_009201544.1 NC_028831_p1 hypothetical protein phrog_13350 unknown function unknown function -1 495 1382
YP_009201577.1 NC_028831_p34 hypothetical protein phrog_1040 peptidase HslV family other 1 19158 19622
YP_009201575.1 NC_028831_p32 hypothetical protein phrog_4049 unknown function unknown function 1 18488 18913
YP_009201582.1 NC_028831_p39 hypothetical protein phrog_5975 unknown function unknown function 1 21244 21720
YP_009201590.1 NC_028831_p47 hypothetical protein singleton unknown function unknown function 1 28726 28884
YP_009201588.1 NC_028831_p45 hypothetical protein phrog_27336 unknown function unknown function 1 27729 28052
YP_009201557.1 NC_028831_p14 primase [Burkholderia phage KL1] phrog_3022 DNA primase DNA, RNA and nucleotide metabolism -1 8078 10420
YP_009201566.1 NC_028831_p23 hypothetical protein phrog_28969 unknown function unknown function 1 15386 15748
YP_009201630.1 NC_028831_p87 hypothetical protein phrog_7864 unknown function unknown function -1 57593 58087
YP_009201625.1 NC_028831_p82 hypothetical protein phrog_24420 unknown function unknown function -1 55237 55425
YP_009201547.1 NC_028831_p4 RNAse H [Enterobacteria phage 9g] phrog_531 Rnase H DNA, RNA and nucleotide metabolism -1 3099 3725
YP_009201594.1 NC_028831_p51 hypothetical protein phrog_179 tail terminator connector 1 30159 30608
YP_009201546.1 NC_028831_p3 ATP-dependent DNA ligase [Enterobacteria phage 9g] phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 2176 3090
YP_009201585.1 NC_028831_p42 hypothetical protein phrog_145 portal protein head and packaging 1 24010 25506
YP_009201613.1 NC_028831_p70 hypothetical protein phrog_23744 unknown function unknown function -1 46949 47242
YP_009201592.1 NC_028831_p49 hypothetical protein phrog_161 head closure Hc1 connector 1 29372 29752
YP_009201586.1 NC_028831_p43 hypothetical protein phrog_206 head scaffolding protein head and packaging 1 25602 26474
YP_009201571.1 NC_028831_p28 hypothetical protein singleton unknown function unknown function 1 16933 17286
YP_009201559.1 NC_028831_p16 hypothetical protein phrog_27223 unknown function unknown function -1 10692 11474
YP_009201556.1 NC_028831_p13 hypothetical protein phrog_22269 unknown function unknown function 1 7827 8051
YP_009201601.1 NC_028831_p58 hypothetical protein phrog_31 central tail fiber J tail 1 37058 40180
YP_009201573.1 NC_028831_p30 hypothetical protein phrog_289 GTP-binding domain other 1 17620 18012
YP_009201551.1 NC_028831_p8 hypothetical protein phrog_17117 unknown function unknown function -1 5316 5486
YP_009201597.1 NC_028831_p54 hypothetical protein phrog_339 tail length tape measure protein tail 1 32361 35477
YP_009201596.1 NC_028831_p53 hypothetical protein phrog_569 tail length tape measure protein tail 1 31556 31963
YP_009201602.1 NC_028831_p59 hypothetical protein phrog_12984 lipoprotein other -1 40215 40448
YP_009201614.1 NC_028831_p71 hypothetical protein phrog_26834 unknown function unknown function -1 47242 47526
YP_009201600.1 NC_028831_p57 hypothetical protein phrog_2134 unknown function unknown function 1 36624 37058
YP_009201609.1 NC_028831_p66 hypothetical protein phrog_15669 unknown function unknown function -1 45999 46280
YP_009201583.1 NC_028831_p40 hypothetical protein phrog_5334 terminase small subunit head and packaging 1 21904 22461
YP_009201552.1 NC_028831_p9 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 5494 6147
YP_009201633.1 NC_028831_p90 hypothetical protein phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism -1 60629 61234
YP_009201631.1 NC_028831_p88 superfamily II DNA/RNA helicase [Enterobacteria phage 9g] phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 58147 60123
YP_009201569.1 NC_028831_p26 hypothetical protein phrog_1972 unknown function unknown function 1 16333 16629
YP_009201584.1 NC_028831_p41 terminase large subunit [Enterobacteria phage 9g] phrog_2 terminase large subunit head and packaging 1 22439 23998
YP_009201607.1 NC_028831_p64 hypothetical protein phrog_7239 unknown function unknown function 1 45469 45753
YP_009201561.1 NC_028831_p18 hypothetical protein phrog_22313 unknown function unknown function -1 12484 13098
YP_009201576.1 NC_028831_p33 hypothetical protein phrog_22841 unknown function unknown function 1 18976 19161
YP_009201629.1 NC_028831_p86 hypothetical protein phrog_11298 unknown function unknown function -1 56662 57465
YP_009201562.1 NC_028831_p19 hypothetical protein phrog_3199 unknown function unknown function -1 13172 13420
YP_009201627.1 NC_028831_p84 hypothetical protein phrog_1972 unknown function unknown function -1 55631 55885
YP_009201563.1 NC_028831_p20 hypothetical protein phrog_28005 unknown function unknown function 1 13959 14243
YP_009201567.1 NC_028831_p24 hypothetical protein phrog_1972 unknown function unknown function 1 15750 15989
YP_009201612.1 NC_028831_p69 hypothetical protein phrog_22730 unknown function unknown function -1 46710 46916
YP_009201554.1 NC_028831_p11 hypothetical protein phrog_25787 unknown function unknown function -1 7041 7346
YP_009201591.1 NC_028831_p48 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 28862 29368
YP_009201564.1 NC_028831_p21 hypothetical protein singleton unknown function unknown function 1 14329 14679
YP_009201555.1 NC_028831_p12 hypothetical protein singleton unknown function unknown function -1 7343 7585
YP_009201615.1 NC_028831_p72 DNA polymerase elongation subunit 1 phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 47591 49576
YP_009201565.1 NC_028831_p22 hypothetical protein phrog_24875 unknown function unknown function 1 15144 15401
YP_009201572.1 NC_028831_p29 hypothetical protein phrog_5321 unknown function unknown function 1 17283 17552
YP_009201574.1 NC_028831_p31 hypothetical protein phrog_25149 unknown function unknown function 1 18016 18486
YP_009201617.1 NC_028831_p74 hypothetical protein phrog_38388 unknown function unknown function -1 50529 50756
YP_009201553.1 NC_028831_p10 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 6157 6624
YP_009201632.1 NC_028831_p89 HNH endonuclease [Cronobacter phage vB_CsaM_GAP32] phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 60120 60626
YP_009201568.1 NC_028831_p25 hypothetical protein phrog_27099 unknown function unknown function 1 15991 16281
YP_009201558.1 NC_028831_p15 hypothetical protein phrog_11967 unknown function unknown function -1 10427 10630
YP_009201620.1 NC_028831_p77 GTP cyclohydrolase 1 [Enterobacteria phage 9g] phrog_2197 GTP cyclohydrolase other -1 52216 52842
YP_009201581.1 NC_028831_p38 hypothetical protein phrog_785 holin lysis 1 20919 21263
YP_009201605.1 NC_028831_p62 hypothetical protein phrog_9157 unknown function unknown function 1 44568 44936
YP_009201604.1 NC_028831_p61 hypothetical protein phrog_9288 unknown function unknown function 1 43789 44496
YP_009201618.1 NC_028831_p75 queuosine tRNA-ribosyltransferase [Enterobacteria phage 9g] phrog_887 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover -1 50756 51676
YP_009201570.1 NC_028831_p27 hypothetical protein phrog_8826 unknown function unknown function 1 16706 16930
YP_009201589.1 NC_028831_p46 hypothetical protein phrog_10966 unknown function unknown function 1 28070 28723
YP_009201545.1 NC_028831_p2 ATPase [Enterobacteria phage 9g] phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 1382 2110
YP_009201595.1 NC_028831_p52 tail subunit [Enterobacteria phage 9g] phrog_290 minor tail protein tail 1 30623 31546
YP_009201624.1 NC_028831_p81 BcepGomrgp35 [Burkholderia phage BcepGomr] phrog_1550 QueC-like queuosine biosynthesis moron, auxiliary metabolic gene and host takeover -1 54528 55235
YP_009201549.1 NC_028831_p6 hypothetical protein phrog_27666 unknown function unknown function -1 4009 4800
YP_009201621.1 NC_028831_p78 6-carboxy-5,6,7,8-tetrahydropterin synthase phrog_2389 QueD-like 6-pyruvoyl-tetrahydropterin synthase moron, auxiliary metabolic gene and host takeover -1 52877 53371
YP_009201611.1 NC_028831_p68 hypothetical protein phrog_12090 unknown function unknown function -1 46476 46667
YP_009201626.1 NC_028831_p83 hypothetical protein phrog_26258 radical SAM domain-containing protein other -1 55418 55630
YP_009201548.1 NC_028831_p5 hypothetical protein phrog_22347 unknown function unknown function -1 3767 3997
YP_009201603.1 NC_028831_p60 hypothetical protein phrog_6578 tail fiber protein tail 1 40531 43617
YP_009201560.1 NC_028831_p17 hypothetical protein phrog_25978 unknown function unknown function -1 12107 12433
YP_009201580.1 NC_028831_p37 hypothetical protein phrog_873 endolysin head and packaging 1 20445 20882
YP_009201587.1 NC_028831_p44 hypothetical protein phrog_247 major head protein head and packaging 1 26597 27658
YP_009201616.1 NC_028831_p73 DNA polymerase beta subunit [Enterobacteria phage 9g] phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 49576 50529
YP_009201628.1 NC_028831_p85 organic radical activating enzyme [Enterobacteria phage 9g] phrog_2076 QueE-like radical SAM domain moron, auxiliary metabolic gene and host takeover -1 55885 56592
YP_009201579.1 NC_028831_p36 hypothetical protein phrog_23528 unknown function unknown function 1 20072 20359