Genomic map of Mycobacterium phage Omnicron (NC_028832)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028832
Definition
Mycobacteriophage Omnicron, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
REFSEQ
Length
61511
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
95
%GC
64.03
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009201690.1 NC_028832_p57 hypothetical protein phrog_1498 unknown function unknown function 1 40537 40707
YP_009201649.1 NC_028832_p16 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 10271 11151
YP_009201714.1 NC_028832_p81 RtcB phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 54503 55708
YP_009201704.1 NC_028832_p71 hypothetical protein phrog_38067 unknown function unknown function 1 49595 49906
YP_009201655.1 NC_028832_p22 hypothetical protein phrog_1697 minor tail protein tail 1 18088 18597
YP_009201634.1 NC_028832_p1 hypothetical protein phrog_10556 unknown function unknown function 1 53 244
YP_009201715.1 NC_028832_p82 hypothetical protein phrog_3167 unknown function unknown function 1 55712 56080
YP_009201640.1 NC_028832_p7 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4366 5994
YP_009201697.1 NC_028832_p64 hypothetical protein phrog_10696 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43198 43689
YP_009201669.1 NC_028832_p36 hypothetical protein phrog_2142 unknown function unknown function 1 29239 29613
YP_009201676.1 NC_028832_p43 hypothetical protein phrog_1746 transcriptional repressor transcription regulation -1 33529 33930
YP_009201643.1 NC_028832_p10 major capsid protein phrog_10 major head protein head and packaging 1 6973 7905
YP_009201673.1 NC_028832_p40 integrase phrog_95 integrase integration and excision 1 30937 32343
YP_009201644.1 NC_028832_p11 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 8147 8530
YP_009201701.1 NC_028832_p68 RusA phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 48055 48420
YP_009201670.1 NC_028832_p37 hypothetical protein phrog_5633 unknown function unknown function 1 29613 29795
YP_009201672.1 NC_028832_p39 hypothetical protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 30280 30720
YP_009201668.1 NC_028832_p35 hypothetical protein phrog_542 unknown function unknown function 1 29081 29239
YP_009201684.1 NC_028832_p51 hypothetical protein phrog_9124 unknown function unknown function 1 37912 38142
YP_009201647.1 NC_028832_p14 head-to-tail connector protein phrog_123 tail terminator connector 1 9133 9555
YP_009201692.1 NC_028832_p59 hypothetical protein phrog_10500 unknown function unknown function 1 41561 41794
YP_009201654.1 NC_028832_p21 minor tail subunit phrog_20962 minor tail protein tail 1 17554 18087
YP_009201719.1 NC_028832_p86 hypothetical protein phrog_980 unknown function unknown function 1 57578 57886
YP_009201682.1 NC_028832_p49 DNA polymerase III phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism 1 36355 37521
YP_009201662.1 NC_028832_p29 lysin A phrog_317 endolysin lysis 1 24325 25953
YP_009201694.1 NC_028832_p61 hypothetical protein phrog_2388 unknown function unknown function 1 42057 42179
YP_009201724.1 NC_028832_p91 hypothetical protein phrog_7638 unknown function unknown function 1 59184 59534
YP_009201689.1 NC_028832_p56 hypothetical protein phrog_2870 unknown function unknown function 1 40271 40540
YP_009201695.1 NC_028832_p62 hypothetical protein phrog_1911 unknown function unknown function 1 42235 42843
YP_009201645.1 NC_028832_p12 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 8530 8898
YP_009201637.1 NC_028832_p4 hypothetical protein phrog_1459 terminase small subunit head and packaging 1 1158 1394
YP_009201681.1 NC_028832_p48 hypothetical protein phrog_2781 unknown function unknown function 1 35732 36313
YP_009201677.1 NC_028832_p44 hypothetical protein phrog_1702 transcriptional repressor transcription regulation 1 34067 34414
YP_009201698.1 NC_028832_p65 hypothetical protein phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43686 44066
YP_009201727.1 NC_028832_p94 hypothetical protein phrog_10816 unknown function unknown function 1 60898 61080
YP_009201657.1 NC_028832_p24 hypothetical protein phrog_1736 minor tail protein tail 1 19679 19996
YP_009201687.1 NC_028832_p54 hypothetical protein phrog_10462 unknown function unknown function 1 39295 39450
YP_009201680.1 NC_028832_p47 hypothetical protein phrog_2286 unknown function unknown function 1 34963 35694
YP_009201720.1 NC_028832_p87 hypothetical protein phrog_3665 unknown function unknown function 1 57883 58032
YP_009201716.1 NC_028832_p83 hypothetical protein phrog_2822 unknown function unknown function 1 56077 56712
YP_009201691.1 NC_028832_p58 hypothetical protein phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 40704 41564
YP_009201700.1 NC_028832_p67 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 46282 47976
YP_009201683.1 NC_028832_p50 hypothetical protein phrog_301 secreted protein other 1 37572 37910
YP_009201653.1 NC_028832_p20 minor tail subunit phrog_110 minor tail protein tail 1 16267 17478
YP_009201651.1 NC_028832_p18 tapemeasure protein phrog_971 endolysin lysis 1 11169 15011
YP_009201722.1 NC_028832_p89 hypothetical protein phrog_9985 unknown function unknown function 1 58318 58644
YP_009201679.1 NC_028832_p46 hypothetical protein phrog_11593 unknown function unknown function 1 34689 34841
YP_009201652.1 NC_028832_p19 minor tail subunit phrog_106 minor tail protein tail 1 15090 16220
YP_009201725.1 NC_028832_p92 hypothetical protein phrog_10342 DNA binding protein DNA, RNA and nucleotide metabolism 1 59815 60204
YP_009201667.1 NC_028832_p34 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 27834 29048
YP_009201696.1 NC_028832_p63 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 42953 43201
YP_009201642.1 NC_028832_p9 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 6242 6898
YP_009201656.1 NC_028832_p23 minor tail subunit phrog_1565 minor tail protein tail 1 18594 19679
YP_009201678.1 NC_028832_p45 hypothetical protein phrog_2908 unknown function unknown function 1 34418 34609
YP_009201658.1 NC_028832_p25 minor tail subunit phrog_346 minor tail protein tail 1 19980 22484
YP_009201675.1 NC_028832_p42 hypothetical protein phrog_950 unknown function unknown function -1 32570 33409
YP_009201671.1 NC_028832_p38 hypothetical protein phrog_1042 unknown function unknown function 1 29782 30006
YP_009201703.1 NC_028832_p70 hypothetical protein singleton unknown function unknown function 1 49348 49560
YP_009201648.1 NC_028832_p15 major tail subunit phrog_117 major tail protein tail 1 9598 10209
YP_009201702.1 NC_028832_p69 hypothetical protein phrog_908 unknown function unknown function 1 48420 49313
YP_009201685.1 NC_028832_p52 hypothetical protein phrog_1956 unknown function unknown function 1 38139 38417
YP_009201666.1 NC_028832_p33 hypothetical protein phrog_1738 unknown function unknown function 1 27596 27847
YP_009201706.1 NC_028832_p73 DNA methylase phrog_116 DNA methyltransferase other 1 50751 51713
YP_009201663.1 NC_028832_p30 lysin B phrog_102 endolysin lysis 1 25950 26807
YP_009201638.1 NC_028832_p5 terminase phrog_2 terminase large subunit head and packaging 1 1387 2814
YP_009201708.1 NC_028832_p75 hypothetical protein phrog_5035 unknown function unknown function 1 52042 52290
YP_009201711.1 NC_028832_p78 hypothetical protein phrog_5288 unknown function unknown function 1 53191 53457
YP_009201693.1 NC_028832_p60 hypothetical protein phrog_1581 unknown function unknown function 1 41791 42003
YP_009201726.1 NC_028832_p93 hypothetical protein singleton unknown function unknown function 1 60457 60687
YP_009201712.1 NC_028832_p79 hypothetical protein phrog_666 unknown function unknown function 1 53454 53666
YP_009201661.1 NC_028832_p28 hypothetical protein phrog_240 head protein head and packaging 1 23896 24297
YP_009201686.1 NC_028832_p53 hypothetical protein phrog_20769 unknown function unknown function 1 38414 39298
YP_009201664.1 NC_028832_p31 holin phrog_565 holin lysis 1 26804 27253
YP_009201688.1 NC_028832_p55 hypothetical protein phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 39478 40266
YP_009201641.1 NC_028832_p8 hypothetical protein phrog_1757 unknown function unknown function 1 5991 6191
YP_009201713.1 NC_028832_p80 hypothetical protein phrog_9980 unknown function unknown function 1 53663 54343
YP_009201728.1 NC_028832_p95 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 61077 61382
YP_009201723.1 NC_028832_p90 hypothetical protein phrog_10190 DNA binding protein DNA, RNA and nucleotide metabolism 1 58646 59038
YP_009201705.1 NC_028832_p72 hypothetical protein phrog_2342 unknown function unknown function 1 49903 50754
YP_009201721.1 NC_028832_p88 hypothetical protein phrog_19470 unknown function unknown function 1 58146 58298
YP_009201635.1 NC_028832_p2 hypothetical protein phrog_2074 unknown function unknown function 1 241 486
YP_009201650.1 NC_028832_p17 tail assembly chaperone phrog_1861 unknown function unknown function 1 10271 10759
YP_009201659.1 NC_028832_p26 hypothetical protein phrog_10753 unknown function unknown function 1 22494 22778
YP_009201639.1 NC_028832_p6 portal protein phrog_104 portal protein head and packaging 1 2826 4379
YP_009201709.1 NC_028832_p76 hypothetical protein phrog_3868 unknown function unknown function 1 52284 52922
YP_009201717.1 NC_028832_p84 hypothetical protein phrog_16134 unknown function unknown function 1 56705 56989
YP_009201699.1 NC_028832_p66 DNA primase phrog_10729 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 44102 46285
YP_009201660.1 NC_028832_p27 hypothetical protein phrog_416 minor tail protein tail 1 22797 23876
YP_009201665.1 NC_028832_p32 hypothetical protein phrog_404 minor tail protein tail 1 27250 27609
YP_009201718.1 NC_028832_p85 hypothetical protein phrog_2493 unknown function unknown function 1 56982 57587
YP_009201707.1 NC_028832_p74 hypothetical protein phrog_5135 unknown function unknown function 1 51710 52045
YP_009201646.1 NC_028832_p13 head-to-tail connector protein phrog_387 neck protein connector 1 8879 9136
YP_009201636.1 NC_028832_p3 hypothetical protein phrog_2293 unknown function unknown function 1 483 713
YP_009201674.1 NC_028832_p41 hypothetical protein phrog_15740 unknown function unknown function 1 32402 32542
YP_009201710.1 NC_028832_p77 hypothetical protein phrog_5794 unknown function unknown function 1 52916 53194