Genomic map of Pseudomonas phage DL62 (NC_028836)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028836
Definition
Pseudomonas phage DL62, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Krylovirinae; Phikmvvirus; Pseudomonas virus DL62.
DB of origin
REFSEQ
Length
42508
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
55
%GC
62.19
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009201856.1 NC_028836_p1 hypothetical protein phrog_31366 unknown function unknown function -1 160 369
YP_009201872.1 NC_028836_p17 hypothetical protein phrog_2563 unknown function unknown function 1 7080 7427
YP_009201870.1 NC_028836_p15 DNA-binding protein phrog_6982 DNA polymerase DNA, RNA and nucleotide metabolism 1 5890 6615
YP_009201883.1 NC_028836_p28 endonuclease phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 16012 16452
YP_009201876.1 NC_028836_p21 hypothetical protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 9664 10275
YP_009201866.1 NC_028836_p11 hypothetical protein phrog_4955 unknown function unknown function 1 4412 4672
YP_009201859.1 NC_028836_p4 hypothetical protein phrog_7124 unknown function unknown function 1 2053 2280
YP_009201869.1 NC_028836_p14 hypothetical protein phrog_6915 unknown function unknown function 1 5528 5887
YP_009201905.1 NC_028836_p50 hypothetical protein phrog_6597 holin lysis 1 40624 40824
YP_009201874.1 NC_028836_p19 DNA primase/helicase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 7613 8437
YP_009201862.1 NC_028836_p7 hypothetical protein phrog_6951 unknown function unknown function 1 3197 3565
YP_009201895.1 NC_028836_p40 tail fibers protein phrog_457 tail protein tail 1 26044 28524
YP_009201857.1 NC_028836_p2 hypothetical protein singleton unknown function unknown function 1 577 861
YP_009201880.1 NC_028836_p25 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11550 13976
YP_009201887.1 NC_028836_p32 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 18228 20675
YP_009201882.1 NC_028836_p27 hypothetical protein phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15081 16022
YP_009201901.1 NC_028836_p46 hypothetical protein phrog_4176 tail fiber protein tail 1 36990 37898
YP_009201875.1 NC_028836_p20 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 8406 9674
YP_009201908.1 NC_028836_p53 hypothetical protein phrog_21506 Rz-like spanin lysis 1 41565 41678
YP_009201868.1 NC_028836_p13 tail fibers protein phrog_5433 unknown function unknown function 1 5040 5459
YP_009201898.1 NC_028836_p43 internal (core) protein phrog_342 internal virion protein with endolysin domain head and packaging 1 31769 35782
YP_009201886.1 NC_028836_p31 hypothetical protein phrog_18213 unknown function unknown function 1 17869 18219
YP_009201899.1 NC_028836_p44 tail fibers protein phrog_6953 tail fiber protein tail 1 35784 36539
YP_009201894.1 NC_028836_p39 tail fibers protein phrog_446 tail protein tail 1 25487 26041
YP_009201896.1 NC_028836_p41 internal (core) protein phrog_805 internal virion protein head and packaging 1 28524 29069
YP_009201891.1 NC_028836_p36 collar protein phrog_449 head-tail adaptor connector 1 21826 23358
YP_009201897.1 NC_028836_p42 baseplate hub protein phrog_2083 internal virion lysozyme motif head and packaging 1 29069 31765
YP_009201871.1 NC_028836_p16 hypothetical protein phrog_9409 unknown function unknown function 1 6695 7114
YP_009201864.1 NC_028836_p9 hypothetical protein phrog_8496 unknown function unknown function 1 3958 4131
YP_009201858.1 NC_028836_p3 hypothetical protein phrog_5722 unknown function unknown function 1 1769 2053
YP_009201863.1 NC_028836_p8 hypothetical protein phrog_7027 unknown function unknown function 1 3552 3779
YP_009201885.1 NC_028836_p30 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 17505 17876
YP_009201893.1 NC_028836_p38 capsid and scaffold protein phrog_267 major head protein head and packaging 1 24383 25390
YP_009201889.1 NC_028836_p34 hypothetical protein phrog_3986 unknown function unknown function 1 21100 21573
YP_009201906.1 NC_028836_p51 lysin phrog_7 endolysin lysis 1 40821 41303
YP_009201884.1 NC_028836_p29 exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 16449 17495
YP_009201904.1 NC_028836_p49 terminase large subunit phrog_38 terminase large subunit head and packaging 1 38822 40627
YP_009201867.1 NC_028836_p12 hypothetical protein phrog_4342 unknown function unknown function 1 4674 4961
YP_009201873.1 NC_028836_p18 hypothetical protein phrog_9768 unknown function unknown function 1 7417 7545
YP_009201892.1 NC_028836_p37 capsid and scaffold protein phrog_1018 head scaffolding protein head and packaging 1 23362 24330
YP_009201878.1 NC_028836_p23 DNA ligase phrog_30362 DNA ligase DNA, RNA and nucleotide metabolism 1 10793 11221
YP_009201865.1 NC_028836_p10 hypothetical protein phrog_4342 unknown function unknown function 1 4131 4412
YP_009201881.1 NC_028836_p26 hypothetical protein phrog_862 unknown function unknown function 1 14032 15081
YP_009201909.1 NC_028836_p54 hypothetical protein phrog_6908 minor head protein head and packaging 1 41680 42093
YP_009201902.1 NC_028836_p47 hypothetical protein phrog_4950 tail fiber protein tail 1 37902 38507
YP_009201861.1 NC_028836_p6 hypothetical protein phrog_12691 unknown function unknown function 1 2999 3118
YP_009201890.1 NC_028836_p35 hypothetical protein phrog_3112 virion structural protein head and packaging 1 21539 21814
YP_009201860.1 NC_028836_p5 hypothetical protein phrog_1448 unknown function unknown function 1 2291 2830
YP_009201877.1 NC_028836_p22 DNA ligase singleton unknown function unknown function 1 10275 10772
YP_009201910.1 NC_028836_p55 hypothetical protein phrog_7171 minor head protein head and packaging 1 42112 42357
YP_009201888.1 NC_028836_p33 hypothetical protein phrog_6575 unknown function unknown function 1 20849 21100
YP_009201879.1 NC_028836_p24 hypothetical protein phrog_7292 unknown function unknown function 1 11224 11553
YP_009201903.1 NC_028836_p48 hypothetical protein phrog_891 terminase small subunit head and packaging 1 38507 38812
YP_009201900.1 NC_028836_p45 hypothetical protein phrog_8874 tail fiber protein tail 1 36539 36997
YP_009201907.1 NC_028836_p52 hypothetical protein phrog_214 Rz-like spanin lysis 1 41261 41590