Genomic map of Paenibacillus phage Xenia (NC_028837)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028837
Definition
Paenibacillus phage Xenia, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sitaravirus; unclassified Sitaravirus.
DB of origin
REFSEQ
Length
41149
Host Name
Paenibacillus larvae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
77
%GC
41.52
Number of singletons
3
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009201940.1 NC_028837_p30 hypothetical protein phrog_29540 unknown function unknown function -1 18161 18322
YP_009201924.1 NC_028837_p14 tail tape-measure protein phrog_58 tail length tape measure protein tail 1 7801 10437
YP_009201942.1 NC_028837_p32 hypothetical protein phrog_36097 unknown function unknown function -1 19325 19483
YP_009201961.1 NC_028837_p51 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 25458 26216
YP_009201932.1 NC_028837_p22 transposase phrog_1299 holin lysis 1 14892 15134
YP_009201929.1 NC_028837_p19 hypothetical protein phrog_134 unknown function unknown function 1 13830 13991
YP_009201986.1 NC_028837_p76 transglycosylase phrog_1315 unknown function unknown function 1 40494 40760
YP_009201974.1 NC_028837_p64 hypothetical protein phrog_7018 unknown function unknown function 1 34414 34596
YP_009201977.1 NC_028837_p67 hypothetical protein phrog_5494 unknown function unknown function 1 35636 36094
YP_009201958.1 NC_028837_p48 hypothetical protein phrog_12765 unknown function unknown function 1 24651 24869
YP_009201933.1 NC_028837_p23 hypothetical protein phrog_9393 unknown function unknown function 1 15268 15459
YP_009201967.1 NC_028837_p57 DNA recombinational protein RecT phrog_2780 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 28922 29830
YP_009201922.1 NC_028837_p12 hypothetical protein phrog_7902 unknown function unknown function 1 7125 7463
YP_009201983.1 NC_028837_p73 toxin HicA phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 39282 39485
YP_009201943.1 NC_028837_p33 hypothetical protein phrog_3374 unknown function unknown function -1 19504 19707
YP_009201955.1 NC_028837_p45 hypothetical protein phrog_26855 unknown function unknown function 1 23567 23689
YP_009201941.1 NC_028837_p31 transposase phrog_151 transposase integration and excision -1 18335 19018
YP_009201970.1 NC_028837_p60 primosome component-like protein phrog_2514 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 30926 31756
YP_009201949.1 NC_028837_p39 hypothetical protein phrog_35277 unknown function unknown function -1 21896 22099
YP_009201946.1 NC_028837_p36 transposase singleton unknown function unknown function -1 20810 20950
YP_009201960.1 NC_028837_p50 hypothetical protein phrog_9497 unknown function unknown function 1 25159 25431
YP_009201915.1 NC_028837_p5 major capsid protein phrog_10 major head protein head and packaging 1 4022 5152
YP_009201963.1 NC_028837_p53 hypothetical protein phrog_8406 unknown function unknown function 1 26667 26930
YP_009201948.1 NC_028837_p38 transposase phrog_151 transposase integration and excision -1 21646 21927
YP_009201979.1 NC_028837_p69 hypothetical protein phrog_15506 unknown function unknown function 1 36615 36896
YP_009201987.1 NC_028837_p77 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40757 41095
YP_009201939.1 NC_028837_p29 transposase phrog_157 transposase integration and excision -1 17445 18164
YP_009201978.1 NC_028837_p68 ArpU-like transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 36145 36603
YP_009201982.1 NC_028837_p72 antitoxin HicB phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover -1 38841 39251
YP_009201952.1 NC_028837_p42 transcriptional regulator singleton unknown function unknown function -1 22637 22768
YP_009201937.1 NC_028837_p27 hypothetical protein phrog_15378 unknown function unknown function 1 16591 17115
YP_009201936.1 NC_028837_p26 amidase domain protein phrog_15561 peptidase other 1 15848 16555
YP_009201950.1 NC_028837_p40 hypothetical protein phrog_29762 unknown function unknown function 1 22172 22324
YP_009201920.1 NC_028837_p10 tail protein phrog_176 tail terminator connector 1 6294 6689
YP_009201913.1 NC_028837_p3 portal protein phrog_12 portal protein head and packaging 1 2066 3319
YP_009201930.1 NC_028837_p20 bacteriocin biosynthesis protein phrog_2429 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 13972 14211
YP_009201966.1 NC_028837_p56 hypothetical protein phrog_5189 unknown function unknown function 1 28728 28925
YP_009201953.1 NC_028837_p43 helix-turn-helix domain XRE family transcriptional regulator phrog_3 transcriptional repressor transcription regulation -1 22841 23083
YP_009201927.1 NC_028837_p17 tail protein phrog_5339 virion structural protein head and packaging 1 12403 13485
YP_009201916.1 NC_028837_p6 hypothetical protein phrog_6793 unknown function unknown function 1 5130 5312
YP_009201921.1 NC_028837_p11 major tail protein phrog_1407 major tail protein tail 1 6691 7128
YP_009201951.1 NC_028837_p41 Rha-like anti-repressor phrog_33133 anti-repressor transcription regulation 1 22411 22734
YP_009201981.1 NC_028837_p71 phosphomannomutase phrog_1454 unknown function unknown function 1 38609 38812
YP_009201938.1 NC_028837_p28 hypothetical protein phrog_17971 unknown function unknown function 1 17246 17386
YP_009201959.1 NC_028837_p49 hypothetical protein phrog_12380 unknown function unknown function 1 24893 25162
YP_009201984.1 NC_028837_p74 hypothetical protein phrog_24621 unknown function unknown function 1 39692 39829
YP_009201945.1 NC_028837_p35 YolD-like protein phrog_8703 unknown function unknown function 1 20469 20753
YP_009201919.1 NC_028837_p9 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 5882 6310
YP_009201954.1 NC_028837_p44 helix-turn-helix domain XRE family protein phrog_925 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 23300 23557
YP_009201926.1 NC_028837_p16 endopeptidase tail protein phrog_538 minor tail protein tail 1 11288 12406
YP_009201917.1 NC_028837_p7 head-tail connector protein phrog_40 head-tail adaptor Ad1 connector 1 5305 5568
YP_009201947.1 NC_028837_p37 transposase phrog_157 transposase integration and excision -1 20951 21640
YP_009201928.1 NC_028837_p18 hypothetical protein phrog_6220 unknown function unknown function 1 13486 13833
YP_009201968.1 NC_028837_p58 metallo-hydrolase phrog_392 metal-dependent hydrolase other 1 29843 30601
YP_009201971.1 NC_028837_p61 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 31722 33044
YP_009201956.1 NC_028837_p46 hypothetical protein phrog_13096 unknown function unknown function 1 23703 23858
YP_009201962.1 NC_028837_p52 hypothetical protein phrog_12825 unknown function unknown function 1 26213 26692
YP_009201980.1 NC_028837_p70 serine recombinase phrog_95 integrase integration and excision 1 36835 38397
YP_009201975.1 NC_028837_p65 hypothetical protein phrog_6998 unknown function unknown function 1 34708 34923
YP_009201969.1 NC_028837_p59 hypothetical protein phrog_7503 unknown function unknown function 1 30598 30912
YP_009201976.1 NC_028837_p66 RuvC-like resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34920 35477
YP_009201957.1 NC_028837_p47 DNA binding antirepressor phrog_373 anti-repressor transcription regulation 1 23884 24624
YP_009201925.1 NC_028837_p15 tail protein phrog_33 distal tail protein Dit tail 1 10434 11285
YP_009201911.1 NC_028837_p1 terminase small subunit phrog_361 terminase small subunit head and packaging 1 50 364
YP_009201914.1 NC_028837_p4 Clp protease phrog_94 head maturation protease head and packaging 1 3303 4025
YP_009201944.1 NC_028837_p34 hypothetical protein phrog_8263 unknown function unknown function -1 19709 20257
YP_009201934.1 NC_028837_p24 hypothetical protein phrog_14009 unknown function unknown function -1 15474 15593
YP_009201912.1 NC_028837_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 345 2069
YP_009201923.1 NC_028837_p13 hypothetical protein phrog_7848 unknown function unknown function 1 7490 7744
YP_009201973.1 NC_028837_p63 DNA-cytosine methyltransferase phrog_363 DNA methyltransferase other 1 33363 34400
YP_009201931.1 NC_028837_p21 N-acetylmuramoyl-L-alanine amidase phrog_3088 amidase lysis 1 14208 14882
YP_009201985.1 NC_028837_p75 hypothetical protein singleton unknown function unknown function -1 39859 40014
YP_009201964.1 NC_028837_p54 hypothetical protein phrog_8288 unknown function unknown function 1 26935 27225
YP_009201918.1 NC_028837_p8 head-tail adaptor protein phrog_25 head closure Hc1 connector 1 5565 5882
YP_009201972.1 NC_028837_p62 hypothetical protein phrog_6868 unknown function unknown function 1 33041 33352
YP_009201935.1 NC_028837_p25 hypothetical protein phrog_14782 unknown function unknown function 1 15741 15851
YP_009201965.1 NC_028837_p55 AAA domain ATPase phrog_1499 unknown function unknown function 1 27209 28741