Genomic map of Escherichia phage slur09 (NC_028840)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028840
Definition
Escherichia phage slur09 genome assembly slu09, chromosome : 1.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus.
DB of origin
REFSEQ
Length
111751
Host Name
Escherichia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
160
%GC
39.01
Number of singletons
2
Number of paralogs
7

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009202112.1 NC_028840_p66 hypothetical protein phrog_3890 straight fibre tail protein tail 1 44848 46932
YP_009202197.1 NC_028840_p151 hypothetical protein phrog_2855 unknown function unknown function 1 107699 107980
YP_009202091.1 NC_028840_p45 hypothetical protein phrog_5851 unknown function unknown function -1 23617 23811
YP_009202168.1 NC_028840_p122 Cell Wall Hydrolase phrog_938 endolysin lysis 1 91185 91634
YP_009202203.1 NC_028840_p157 hypothetical protein phrog_4243 unknown function unknown function 1 109825 110523
YP_009202076.1 NC_028840_p30 hypothetical protein phrog_4227 endonuclease nicking abasic sites generated by host uracil glycosylase Ung moron, auxiliary metabolic gene and host takeover -1 14521 14733
YP_009202184.1 NC_028840_p138 hypothetical protein phrog_6073 Rz-like spanin lysis 1 101467 101664
YP_009202166.1 NC_028840_p120 hypothetical protein phrog_1491 tail fiber protein tail 1 89781 90419
YP_009202173.1 NC_028840_p127 hypothetical protein phrog_8119 unknown function unknown function -1 94961 95947
YP_009202059.1 NC_028840_p13 hypothetical protein phrog_3880 unknown function unknown function 1 6759 7037
YP_009202138.1 NC_028840_p92 hypothetical protein phrog_3611 helicase DNA, RNA and nucleotide metabolism -1 69889 70593
YP_009202095.1 NC_028840_p49 hypothetical protein phrog_3802 terminase small subunit head and packaging 1 26450 26932
YP_009202155.1 NC_028840_p109 hypothetical protein phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism 1 84560 85093
YP_009202123.1 NC_028840_p77 hypothetical protein phrog_4258 unknown function unknown function -1 57308 57592
YP_009202187.1 NC_028840_p141 hypothetical protein phrog_27262 unknown function unknown function 1 103964 104200
YP_009202172.1 NC_028840_p126 hypothetical protein phrog_7894 unknown function unknown function -1 94523 94939
YP_009202182.1 NC_028840_p136 hypothetical protein phrog_5473 unknown function unknown function 1 100368 100553
YP_009202049.1 NC_028840_p3 Bacteriophage T holin phrog_860 holin lysis 1 1645 2301
YP_009202061.1 NC_028840_p15 hypothetical protein phrog_4984 unknown function unknown function 1 7564 7845
YP_009202065.1 NC_028840_p19 hypothetical protein phrog_4215 unknown function unknown function 1 8700 9161
YP_009202052.1 NC_028840_p6 hypothetical protein phrog_4328 unknown function unknown function 1 3281 3712
YP_009202159.1 NC_028840_p113 hypothetical protein phrog_4593 unknown function unknown function 1 86860 87144
YP_009202053.1 NC_028840_p7 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 3705 3995
YP_009202120.1 NC_028840_p74 Calcineurin-like phosphoesterase superfamily domain protein phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 55067 56044
YP_009202127.1 NC_028840_p81 hypothetical protein phrog_35630 unknown function unknown function -1 62313 62642
YP_009202195.1 NC_028840_p149 hypothetical protein phrog_4499 unknown function unknown function 1 106839 107153
YP_009202047.1 NC_028840_p1 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 124 876
YP_009202174.1 NC_028840_p128 hypothetical protein phrog_849 DNA primase DNA, RNA and nucleotide metabolism 1 96213 96731
YP_009202060.1 NC_028840_p14 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 7031 7342
YP_009202167.1 NC_028840_p121 hypothetical protein phrog_1479 unknown function unknown function 1 90862 91179
YP_009202165.1 NC_028840_p119 hypothetical protein phrog_5252 unknown function unknown function 1 89538 89720
YP_009202160.1 NC_028840_p114 Swarming motility protein YbiA phrog_1017 unknown function unknown function 1 87141 87590
YP_009202081.1 NC_028840_p35 hypothetical protein phrog_4718 unknown function unknown function 1 17938 18141
YP_009202199.1 NC_028840_p153 hypothetical protein phrog_5486 unknown function unknown function 1 108265 108684
YP_009202162.1 NC_028840_p116 hypothetical protein phrog_2380 unknown function unknown function 1 88245 88460
YP_009202102.1 NC_028840_p56 hypothetical protein phrog_442 head-tail adaptor connector 1 32589 33101
YP_009202089.1 NC_028840_p43 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 22922 23419
YP_009202094.1 NC_028840_p48 hypothetical protein phrog_4815 receptor binding tail protein tail 1 24520 26439
YP_009202185.1 NC_028840_p139 hypothetical protein phrog_6221 unknown function unknown function 1 101854 102018
YP_009202147.1 NC_028840_p101 hypothetical protein phrog_5827 unknown function unknown function -1 76767 76988
YP_009202084.1 NC_028840_p38 hypothetical protein phrog_4820 membrane protein moron, auxiliary metabolic gene and host takeover 1 19223 19420
YP_009202190.1 NC_028840_p144 hypothetical protein phrog_15108 unknown function unknown function 1 104986 105153
YP_009202072.1 NC_028840_p26 hypothetical protein singleton unknown function unknown function -1 13713 13826
YP_009202158.1 NC_028840_p112 Ribonuclease H phrog_531 Rnase H DNA, RNA and nucleotide metabolism 1 86307 86783
YP_009202136.1 NC_028840_p90 hypothetical protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism -1 69134 69544
YP_009202180.1 NC_028840_p134 hypothetical protein phrog_5876 unknown function unknown function 1 99233 99505
YP_009202205.1 NC_028840_p159 hypothetical protein phrog_812 Rz-like spanin lysis 1 110860 111213
YP_009202206.1 NC_028840_p160 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 111215 111751
YP_009202194.1 NC_028840_p148 Autonomous glycyl radical cofactor phrog_1209 unknown function unknown function 1 106389 106757
YP_009202163.1 NC_028840_p117 hypothetical protein phrog_4586 unknown function unknown function 1 88502 88738
YP_009202178.1 NC_028840_p132 hypothetical protein phrog_5153 unknown function unknown function 1 97683 97889
YP_009202097.1 NC_028840_p51 hypothetical protein phrog_3497 unknown function unknown function 1 28363 28800
YP_009202069.1 NC_028840_p23 hypothetical protein phrog_5271 unknown function unknown function 1 9959 10570
YP_009202105.1 NC_028840_p59 Bacterial Ig-like domain (group 2) phrog_3575 major tail protein tail 1 34384 35775
YP_009202071.1 NC_028840_p25 hypothetical protein phrog_4605 unknown function unknown function 1 11288 12016
YP_009202106.1 NC_028840_p60 hypothetical protein phrog_3889 base plate tail tube protein tail 1 35780 36676
YP_009202073.1 NC_028840_p27 hypothetical protein phrog_6973 unknown function unknown function -1 13823 14026
YP_009202198.1 NC_028840_p152 hypothetical protein phrog_4821 unknown function unknown function 1 107973 108272
YP_009202101.1 NC_028840_p55 Phage capsid family protein phrog_10 major head protein head and packaging 1 31153 32529
YP_009202070.1 NC_028840_p24 hypothetical protein phrog_8993 unknown function unknown function 1 10570 11295
YP_009202148.1 NC_028840_p102 hypothetical protein phrog_5236 unknown function unknown function -1 76957 77163
YP_009202175.1 NC_028840_p129 hypothetical protein phrog_10617 unknown function unknown function 1 96946 97134
YP_009202063.1 NC_028840_p17 hypothetical protein phrog_4731 unknown function unknown function 1 8077 8403
YP_009202087.1 NC_028840_p41 hypothetical protein phrog_4576 unknown function unknown function 1 21524 21925
YP_009202145.1 NC_028840_p99 hypothetical protein phrog_5116 unknown function unknown function -1 75793 75978
YP_009202139.1 NC_028840_p93 hypothetical protein phrog_5291 unknown function unknown function -1 70664 70897
YP_009202118.1 NC_028840_p72 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 52762 53244
YP_009202176.1 NC_028840_p130 hypothetical protein phrog_6060 anti-termination protein Q-like transcription regulation 1 97144 97329
YP_009202082.1 NC_028840_p36 hypothetical protein phrog_3747 unknown function unknown function 1 18373 18624
YP_009202191.1 NC_028840_p145 hypothetical protein phrog_4760 unknown function unknown function 1 105221 105514
YP_009202189.1 NC_028840_p143 hypothetical protein phrog_5919 unknown function unknown function 1 104712 104876
YP_009202149.1 NC_028840_p103 hypothetical protein phrog_11748 unknown function unknown function -1 77156 77536
YP_009202103.1 NC_028840_p57 hypothetical protein phrog_3725 tail completion or Neck1 protein connector 1 33101 33868
YP_009202122.1 NC_028840_p76 hypothetical protein phrog_1607 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 56542 57315
YP_009202075.1 NC_028840_p29 hypothetical protein phrog_4379 unknown function unknown function -1 14175 14519
YP_009202152.1 NC_028840_p106 hypothetical protein phrog_5357 tail length tape measure protein tail 1 80617 80838
YP_009202132.1 NC_028840_p86 DNA ligase phrog_3498 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 66401 67180
YP_009202164.1 NC_028840_p118 hypothetical protein phrog_255 exonuclease DNA, RNA and nucleotide metabolism 1 88766 89467
YP_009202110.1 NC_028840_p64 hypothetical protein phrog_1302 distal tail protein tail 1 41387 42001
YP_009202151.1 NC_028840_p105 PhoH-like protein phrog_170 PhoH-like phosphate starvation-inducible other 1 79863 80615
YP_009202093.1 NC_028840_p47 hypothetical protein phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover -1 24207 24440
YP_009202057.1 NC_028840_p11 hypothetical protein phrog_547 phosphoesterase other 1 5491 6081
YP_009202137.1 NC_028840_p91 hypothetical protein phrog_643 transcriptional regulator transcription regulation -1 69651 69896
YP_009202113.1 NC_028840_p67 hypothetical protein phrog_1084 unknown function unknown function 1 46937 47359
YP_009202055.1 NC_028840_p9 Serine/threonine-protein phosphatase 2 phrog_246 NinI-like serine-threonine phosphatase other 1 4341 5204
YP_009202086.1 NC_028840_p40 hypothetical protein phrog_8297 unknown function unknown function 1 21230 21487
YP_009202107.1 NC_028840_p61 hypothetical protein phrog_313 Tail assembly chaperone tail 1 36676 37080
YP_009202079.1 NC_028840_p33 hypothetical protein phrog_6741 unknown function unknown function -1 15271 15765
YP_009202142.1 NC_028840_p96 hypothetical protein phrog_2502 unknown function unknown function -1 74696 75124
YP_009202150.1 NC_028840_p104 Anaerobic ribonucleoside-triphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover -1 77636 79510
YP_009202092.1 NC_028840_p46 hypothetical protein phrog_6369 unknown function unknown function -1 23808 23915
YP_009202126.1 NC_028840_p80 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 59652 62219
YP_009202077.1 NC_028840_p31 hypothetical protein phrog_5607 unknown function unknown function -1 14736 14885
YP_009202083.1 NC_028840_p37 hypothetical protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism 1 18723 19130
YP_009202115.1 NC_028840_p69 hypothetical protein phrog_5592 unknown function unknown function -1 51218 51481
YP_009202109.1 NC_028840_p63 hypothetical protein phrog_3779 tail length tape measure protein tail 1 37594 41277
YP_009202068.1 NC_028840_p22 hypothetical protein phrog_5799 unknown function unknown function 1 9774 9959
YP_009202074.1 NC_028840_p28 hypothetical protein singleton unknown function unknown function -1 14042 14149
YP_009202098.1 NC_028840_p52 Phage portal protein phrog_12 portal protein head and packaging 1 28800 30017
YP_009202202.1 NC_028840_p156 hypothetical protein phrog_5468 unknown function unknown function 1 109326 109670
YP_009202156.1 NC_028840_p110 Thymidylate synthase 2 phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 85093 85932
YP_009202177.1 NC_028840_p131 hypothetical protein phrog_7716 unknown function unknown function 1 97523 97690
YP_009202066.1 NC_028840_p20 hypothetical protein phrog_4905 unknown function unknown function 1 9109 9480
YP_009202124.1 NC_028840_p78 Type III restriction enzyme, res subunit phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 57813 59165
YP_009202104.1 NC_028840_p58 hypothetical protein phrog_3907 tail terminator connector 1 33872 34357
YP_009202170.1 NC_028840_p124 hypothetical protein phrog_1460 tRNA amidotransferase DNA, RNA and nucleotide metabolism 1 91873 92307
YP_009202135.1 NC_028840_p89 hypothetical protein phrog_3696 unknown function unknown function -1 68801 69097
YP_009202129.1 NC_028840_p83 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 63556 64089
YP_009202054.1 NC_028840_p8 hypothetical protein phrog_7354 major head protein head and packaging 1 4093 4338
YP_009202048.1 NC_028840_p2 Clp protease phrog_1827 ATP-dependent protease other 1 889 1488
YP_009202117.1 NC_028840_p71 DNA polymerase I phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 51887 52762
YP_009202050.1 NC_028840_p4 hypothetical protein phrog_465 endolysin lysis 1 2298 2711
YP_009202204.1 NC_028840_p158 hypothetical protein phrog_739 Rz-like spanin lysis 1 110480 110908
YP_009202144.1 NC_028840_p98 hypothetical protein phrog_5116 unknown function unknown function -1 75620 75802
YP_009202140.1 NC_028840_p94 hypothetical protein phrog_3712 replication origin binding DNA, RNA and nucleotide metabolism -1 70881 73670
YP_009202130.1 NC_028840_p84 hypothetical protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 64086 65609
YP_009202080.1 NC_028840_p34 hypothetical protein phrog_4263 unknown function unknown function -1 15830 16822
YP_009202056.1 NC_028840_p10 hypothetical protein phrog_14979 unknown function unknown function 1 5204 5491
YP_009202099.1 NC_028840_p53 hypothetical protein phrog_2973 Hoc-like head decoration head and packaging 1 30014 30499
YP_009202111.1 NC_028840_p65 hypothetical protein phrog_31 central tail fiber J tail 1 41998 44847
YP_009202062.1 NC_028840_p16 hypothetical protein phrog_4804 unknown function unknown function 1 7842 8087
YP_009202051.1 NC_028840_p5 hypothetical protein phrog_5944 unknown function unknown function 1 2789 3205
YP_009202193.1 NC_028840_p147 hypothetical protein phrog_3909 unknown function unknown function 1 106008 106202
YP_009202169.1 NC_028840_p123 hypothetical protein phrog_5077 unknown function unknown function 1 91703 91873
YP_009202096.1 NC_028840_p50 Terminase-like family protein phrog_2 terminase large subunit head and packaging 1 26932 28248
YP_009202121.1 NC_028840_p75 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 56028 56504
YP_009202128.1 NC_028840_p82 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 62669 63559
YP_009202183.1 NC_028840_p137 hypothetical protein phrog_3972 unknown function unknown function 1 100666 101013
YP_009202141.1 NC_028840_p95 hypothetical protein phrog_2502 unknown function unknown function -1 74291 74686
YP_009202131.1 NC_028840_p85 hypothetical protein phrog_323 transcriptional regulator, D5-like transcription regulation -1 65641 66408
YP_009202154.1 NC_028840_p108 Ribonucleoside-diphosphate reductase 1 subunit beta phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 83418 84563
YP_009202108.1 NC_028840_p62 hypothetical protein phrog_3914 tail assembly chaperone tail 1 37142 37510
YP_009202201.1 NC_028840_p155 hypothetical protein phrog_5265 unknown function unknown function 1 108931 109215
YP_009202090.1 NC_028840_p44 hypothetical protein phrog_6447 membrane protein moron, auxiliary metabolic gene and host takeover -1 23406 23624
YP_009202067.1 NC_028840_p21 hypothetical protein phrog_6021 unknown function unknown function 1 9541 9774
YP_009202161.1 NC_028840_p115 hypothetical protein phrog_4516 unknown function unknown function 1 87666 88181
YP_009202088.1 NC_028840_p42 hypothetical protein phrog_415 polynucleotide kinase other 1 22014 22748
YP_009202186.1 NC_028840_p140 hypothetical protein phrog_2210 unknown function unknown function 1 103774 103971
YP_009202179.1 NC_028840_p133 hypothetical protein phrog_4551 unknown function unknown function 1 97980 98255
YP_009202153.1 NC_028840_p107 Ribonucleoside-diphosphate reductase 1 subunit alpha phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 80876 83311
YP_009202119.1 NC_028840_p73 DNA double-strand break repair Rad50 ATPase phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism -1 53248 55086
YP_009202171.1 NC_028840_p125 SPFH domain / Band 7 family protein phrog_200 lipoprotein other 1 93251 94198
YP_009202125.1 NC_028840_p79 hypothetical protein phrog_4386 unknown function unknown function -1 59162 59659
YP_009202146.1 NC_028840_p100 NAD-dependent protein deacylase phrog_2162 Sir2 (NAD-dependent deacetylase) DNA, RNA and nucleotide metabolism -1 75956 76774
YP_009202133.1 NC_028840_p87 DNA ligase phrog_3359 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 67383 68354
YP_009202200.1 NC_028840_p154 hypothetical protein phrog_5792 unknown function unknown function 1 108638 108934
YP_009202143.1 NC_028840_p97 hypothetical protein phrog_1818 unknown function unknown function -1 75127 75633
YP_009202116.1 NC_028840_p70 Deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 51444 51890
YP_009202085.1 NC_028840_p39 hypothetical protein phrog_1745 DNA transfer protein other 1 19511 21175
YP_009202058.1 NC_028840_p12 hypothetical protein phrog_4979 unknown function unknown function 1 6249 6680
YP_009202078.1 NC_028840_p32 hypothetical protein phrog_5145 unknown function unknown function -1 14935 15243
YP_009202114.1 NC_028840_p68 hypothetical protein phrog_6578 tail fiber protein tail 1 47359 51177
YP_009202192.1 NC_028840_p146 hypothetical protein phrog_9814 unknown function unknown function 1 105514 105720
YP_009202188.1 NC_028840_p142 hypothetical protein phrog_5598 unknown function unknown function 1 104468 104719
YP_009202100.1 NC_028840_p54 Caudovirus prohead protease phrog_80 head maturation protease head and packaging 1 30503 31135
YP_009202196.1 NC_028840_p150 hypothetical protein phrog_5021 unknown function unknown function 1 107275 107622
YP_009202157.1 NC_028840_p111 hypothetical protein phrog_5321 unknown function unknown function 1 86026 86307
YP_009202064.1 NC_028840_p18 hypothetical protein phrog_5967 unknown function unknown function 1 8503 8703
YP_009202134.1 NC_028840_p88 hypothetical protein phrog_4053 transcriptional regulator transcription regulation -1 68442 68750
YP_009202181.1 NC_028840_p135 hypothetical protein phrog_8408 unknown function unknown function 1 99556 99780