Genomic map of Bacteriophage Lily (NC_028841)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028841
Definition
Bacteriophage Lily, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Lilyvirus; Paenibacillus virus Lily.
DB of origin
REFSEQ
Length
44952
Host Name
Paenibacillus larvae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
74
%GC
42.73
Number of singletons
9
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009202263.1 NC_028841_p57 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 34803 36131
YP_009202272.1 NC_028841_p66 hypothetical protein phrog_6998 unknown function unknown function 1 39133 39348
YP_009202233.1 NC_028841_p27 hypothetical protein phrog_134 unknown function unknown function 1 19122 19280
YP_009202256.1 NC_028841_p50 hypothetical protein singleton unknown function unknown function 1 30015 30209
YP_009202267.1 NC_028841_p61 DNA N-6-adenine methyltransferase phrog_111 DNA methyltransferase other 1 37368 37799
YP_009202264.1 NC_028841_p58 hypothetical protein phrog_6868 unknown function unknown function 1 36134 36451
YP_009202223.1 NC_028841_p17 tail tape measure phrog_991 tail length tape measure protein tail 1 11029 13542
YP_009202237.1 NC_028841_p31 GTP pyrophosphokinase-like protein phrog_4012 unknown function unknown function 1 20672 21346
YP_009202209.1 NC_028841_p3 hypothetical protein phrog_118 head-tail adaptor connector 1 2525 2746
YP_009202226.1 NC_028841_p20 baseplate assembly protein phrog_11 baseplate spike tail 1 14775 15152
YP_009202208.1 NC_028841_p2 terminase large subunit phrog_15 terminase large subunit head and packaging 1 649 2508
YP_009202213.1 NC_028841_p7 major capsid protein phrog_29 major head protein head and packaging 1 5749 6777
YP_009202239.1 NC_028841_p33 hypothetical protein phrog_37475 unknown function unknown function 1 22350 22901
YP_009202278.1 NC_028841_p72 hypothetical protein phrog_1454 unknown function unknown function 1 43067 43270
YP_009202279.1 NC_028841_p73 HicB-like protein phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover -1 43299 43709
YP_009202259.1 NC_028841_p53 RecT-like protein phrog_2780 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 31909 32826
YP_009202266.1 NC_028841_p60 hypothetical protein phrog_24928 unknown function unknown function 1 36908 37366
YP_009202268.1 NC_028841_p62 DNA-cytosine methyltransferase phrog_363 DNA methyltransferase other 1 37796 38560
YP_009202234.1 NC_028841_p28 bacteriocin-like protein phrog_2429 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 19316 19555
YP_009202221.1 NC_028841_p15 hypothetical protein phrog_3140 tail assembly chaperone tail 1 10526 10870
YP_009202255.1 NC_028841_p49 hypothetical protein phrog_36416 unknown function unknown function 1 29567 29998
YP_009202253.1 NC_028841_p47 hypothetical protein phrog_13275 unknown function unknown function 1 28637 28810
YP_009202252.1 NC_028841_p46 hypothetical protein phrog_10535 unknown function unknown function 1 28420 28653
YP_009202227.1 NC_028841_p21 tail terminator phrog_76 tail protein tail 1 15149 15550
YP_009202215.1 NC_028841_p9 hypothetical protein phrog_2551 minor tail protein tail 1 6937 7248
YP_009202238.1 NC_028841_p32 GepA-like protein phrog_10390 unknown function unknown function 1 21361 22110
YP_009202207.1 NC_028841_p1 terminase small subunit phrog_57 terminase small subunit head and packaging 1 156 665
YP_009202251.1 NC_028841_p45 hypothetical protein phrog_22780 unknown function unknown function 1 28183 28401
YP_009202260.1 NC_028841_p54 beta-lactamase-like hydrolase phrog_392 metal-dependent hydrolase other 1 32839 33597
YP_009202217.1 NC_028841_p11 hypothetical protein phrog_2581 virion structural protein head and packaging 1 7793 8260
YP_009202265.1 NC_028841_p59 hypothetical protein singleton unknown function unknown function 1 36464 36895
YP_009202231.1 NC_028841_p25 tail protein phrog_7037 tail fiber protein tail 1 17548 18783
YP_009202280.1 NC_028841_p74 HicA-like protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 43740 43943
YP_009202235.1 NC_028841_p29 N-acetylmuramoyl-L-alanine amidase-like protein phrog_3088 amidase lysis 1 19552 20226
YP_009202271.1 NC_028841_p65 hypothetical protein phrog_98 unknown function unknown function 1 38757 39140
YP_009202247.1 NC_028841_p41 DNA binding protein phrog_8 transcriptional regulator transcription regulation -1 26448 26894
YP_009202211.1 NC_028841_p5 Clp protease-like protein phrog_53 head maturation protease head and packaging 1 4262 5383
YP_009202218.1 NC_028841_p12 hypothetical protein singleton unknown function unknown function 1 8257 8529
YP_009202216.1 NC_028841_p10 tail protein phrog_27 tail completion or Neck1 protein connector 1 7245 7796
YP_009202269.1 NC_028841_p63 hypothetical protein phrog_1008 DNA methyltransferase other 1 37980 38471
YP_009202228.1 NC_028841_p22 baseplate wedge protein phrog_43 baseplate wedge subunit tail 1 15540 15866
YP_009202246.1 NC_028841_p40 hypothetical protein phrog_9078 unknown function unknown function -1 25256 25765
YP_009202258.1 NC_028841_p52 hypothetical protein phrog_5189 unknown function unknown function 1 31709 31906
YP_009202249.1 NC_028841_p43 hypothetical protein singleton unknown function unknown function 1 27445 27765
YP_009202273.1 NC_028841_p67 RuvC-like resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 39345 39932
YP_009202262.1 NC_028841_p56 primosome component-like protein phrog_2514 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 34007 34843
YP_009202257.1 NC_028841_p51 ATPase phrog_1499 unknown function unknown function 1 30193 31722
YP_009202240.1 NC_028841_p34 hypothetical protein phrog_37623 unknown function unknown function 1 22913 23173
YP_009202236.1 NC_028841_p30 holin-like protein phrog_1299 holin lysis 1 20236 20478
YP_009202248.1 NC_028841_p42 DNA binding protein phrog_925 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 27113 27316
YP_009202229.1 NC_028841_p23 baseplate protein phrog_6 baseplate wedge subunit tail 1 15863 16987
YP_009202224.1 NC_028841_p18 tail protein phrog_46 baseplate hub tail 1 13539 13748
YP_009202232.1 NC_028841_p26 hypothetical protein phrog_6220 unknown function unknown function 1 18793 19125
YP_009202230.1 NC_028841_p24 tail protein phrog_48 tail protein tail 1 16984 17547
YP_009202270.1 NC_028841_p64 hypothetical protein phrog_7018 unknown function unknown function 1 38557 38739
YP_009202212.1 NC_028841_p6 hypothetical protein phrog_49 head decoration head and packaging 1 5380 5733
YP_009202222.1 NC_028841_p16 hypothetical protein singleton unknown function unknown function 1 10906 11028
YP_009202261.1 NC_028841_p55 hypothetical protein phrog_7503 unknown function unknown function 1 33594 33992
YP_009202220.1 NC_028841_p14 tail tube phrog_55 head closure connector 1 9982 10500
YP_009202210.1 NC_028841_p4 portal protein phrog_21 portal protein head and packaging 1 2743 4302
YP_009202274.1 NC_028841_p68 hypothetical protein phrog_5494 unknown function unknown function 1 40091 40552
YP_009202243.1 NC_028841_p37 Xre-like protein phrog_3 transcriptional repressor transcription regulation 1 24419 24649
YP_009202219.1 NC_028841_p13 tail sheath phrog_23 tail sheath tail 1 8533 9969
YP_009202275.1 NC_028841_p69 ArpU-like transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 40603 41061
YP_009202277.1 NC_028841_p71 serine recombinase phrog_95 integrase integration and excision 1 41293 42855
YP_009202244.1 NC_028841_p38 hypothetical protein singleton unknown function unknown function 1 24700 24828
YP_009202245.1 NC_028841_p39 hemolysin BL-like protein phrog_38199 membrane associated protein moron, auxiliary metabolic gene and host takeover -1 25034 25237
YP_009202241.1 NC_028841_p35 hypothetical protein phrog_25315 unknown function unknown function -1 23485 23757
YP_009202214.1 NC_028841_p8 hypothetical protein singleton unknown function unknown function 1 6791 6940
YP_009202254.1 NC_028841_p48 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 28815 29570
YP_009202250.1 NC_028841_p44 hypothetical protein singleton unknown function unknown function 1 27795 28148
YP_009202276.1 NC_028841_p70 hypothetical protein phrog_15506 unknown function unknown function 1 41073 41354
YP_009202242.1 NC_028841_p36 hypothetical protein singleton unknown function unknown function -1 24200 24322
YP_009202225.1 NC_028841_p19 late control protein phrog_52 tail protein tail 1 13745 14773