Genomic map of Mycobacterium phage Lolly9 (NC_028843)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028843
Definition
Mycobacterium phage Lolly9, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bronvirus; unclassified Bronvirus.
DB of origin
REFSEQ
Length
75816
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
130
%GC
59.31
Number of singletons
12
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009202463.1 NC_028843_p76 HJ Resolvase RusA-like protein phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 53537 53929
YP_009202430.1 NC_028843_p43 hypothetical protein phrog_5916 unknown function unknown function 1 36288 36650
YP_009202434.1 NC_028843_p47 hypothetical protein phrog_17191 unknown function unknown function 1 38143 38316
YP_009202497.1 NC_028843_p110 hypothetical protein singleton unknown function unknown function -1 67142 67402
YP_009202408.1 NC_028843_p21 Minor tail protein phrog_746 minor tail protein tail 1 19528 22035
YP_009202406.1 NC_028843_p19 Minor tail protein phrog_110 minor tail protein tail 1 17191 18954
YP_009202415.1 NC_028843_p28 Lysin B phrog_102 endolysin lysis 1 26618 27661
YP_009202389.1 NC_028843_p2 hypothetical protein phrog_1496 terminase small subunit head and packaging 1 481 852
YP_009202403.1 NC_028843_p16 Tail assembly chaperone phrog_18272 tail assembly chaperone tail 1 10438 10947
YP_009202448.1 NC_028843_p61 ssDNA bindiing protein ERF family phrog_5917 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 45358 45630
YP_009202507.1 NC_028843_p120 hypothetical protein singleton unknown function unknown function -1 70939 71193
YP_009202493.1 NC_028843_p106 hypothetical protein phrog_6170 unknown function unknown function 1 65540 65926
YP_009202405.1 NC_028843_p18 Minor tail protein phrog_106 minor tail protein tail 1 16308 17198
YP_009202517.1 NC_028843_p130 hypothetical protein singleton unknown function unknown function -1 75251 75412
YP_009202480.1 NC_028843_p93 DNA-Q exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 60499 61281
YP_009202503.1 NC_028843_p116 hypothetical protein phrog_6004 unknown function unknown function -1 69501 69785
YP_009202509.1 NC_028843_p122 hypothetical protein singleton unknown function unknown function -1 72298 72462
YP_009202496.1 NC_028843_p109 hypothetical protein singleton unknown function unknown function 1 67032 67160
YP_009202412.1 NC_028843_p25 hypothetical protein phrog_1087 unknown function unknown function 1 24634 24741
YP_009202501.1 NC_028843_p114 hypothetical protein phrog_6224 unknown function unknown function -1 69015 69251
YP_009202494.1 NC_028843_p107 hypothetical protein singleton unknown function unknown function -1 66139 66315
YP_009202453.1 NC_028843_p66 hypothetical protein phrog_1882 unknown function unknown function 1 47057 47737
YP_009202436.1 NC_028843_p49 hypothetical protein phrog_4870 unknown function unknown function 1 39499 39897
YP_009202422.1 NC_028843_p35 hypothetical protein phrog_17141 unknown function unknown function -1 30781 31164
YP_009202419.1 NC_028843_p32 hypothetical protein phrog_6558 unknown function unknown function -1 29132 29407
YP_009202429.1 NC_028843_p42 hypothetical protein phrog_572 unknown function unknown function 1 35541 35864
YP_009202410.1 NC_028843_p23 hypothetical protein phrog_240 head protein head and packaging 1 23272 23655
YP_009202487.1 NC_028843_p100 hypothetical protein singleton unknown function unknown function 1 62754 62867
YP_009202444.1 NC_028843_p57 hypothetical protein phrog_5858 unknown function unknown function 1 43242 43418
YP_009202504.1 NC_028843_p117 hypothetical protein phrog_8547 unknown function unknown function -1 69788 69937
YP_009202439.1 NC_028843_p52 hypothetical protein phrog_1673 unknown function unknown function 1 40395 40631
YP_009202388.1 NC_028843_p1 hypothetical protein phrog_23622 unknown function unknown function 1 84 473
YP_009202495.1 NC_028843_p108 hypothetical protein phrog_4776 unknown function unknown function -1 66387 67013
YP_009202468.1 NC_028843_p81 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 55259 55642
YP_009202418.1 NC_028843_p31 NrdH glutaredoxin protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 28548 28814
YP_009202474.1 NC_028843_p87 hypothetical protein phrog_20980 unknown function unknown function 1 58708 58812
YP_009202466.1 NC_028843_p79 hypothetical protein phrog_1941 unknown function unknown function 1 54471 54710
YP_009202481.1 NC_028843_p94 hypothetical protein phrog_6821 unknown function unknown function 1 61278 61478
YP_009202428.1 NC_028843_p41 hypothetical protein phrog_762 unknown function unknown function 1 34974 35369
YP_009202427.1 NC_028843_p40 DNA binding protein phrog_66 excisionase and transcriptional regulator integration and excision 1 34759 34977
YP_009202457.1 NC_028843_p70 hypothetical protein phrog_18534 unknown function unknown function 1 49728 49886
YP_009202393.1 NC_028843_p6 Portal phrog_104 portal protein head and packaging 1 2762 4405
YP_009202472.1 NC_028843_p85 CliP protease phrog_94 head maturation protease head and packaging 1 57509 58162
YP_009202441.1 NC_028843_p54 hypothetical protein phrog_301 secreted protein other 1 42464 42805
YP_009202423.1 NC_028843_p36 Integrase (Y-int) phrog_1 integrase integration and excision 1 31683 32990
YP_009202505.1 NC_028843_p118 hypothetical protein singleton unknown function unknown function -1 69939 70076
YP_009202417.1 NC_028843_p30 hypothetical protein phrog_726 unknown function unknown function 1 28138 28557
YP_009202459.1 NC_028843_p72 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other 1 50013 50861
YP_009202447.1 NC_028843_p60 hypothetical protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 44570 45358
YP_009202450.1 NC_028843_p63 hypothetical protein phrog_1389 unknown function unknown function 1 45932 46303
YP_009202464.1 NC_028843_p77 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 53913 54164
YP_009202392.1 NC_028843_p5 Terminase large subunit phrog_9 terminase large subunit head and packaging 1 1196 2761
YP_009202397.1 NC_028843_p10 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 7378 7854
YP_009202512.1 NC_028843_p125 hypothetical protein phrog_28370 unknown function unknown function -1 74033 74185
YP_009202390.1 NC_028843_p3 hypothetical protein phrog_18572 unknown function unknown function 1 857 1045
YP_009202510.1 NC_028843_p123 AAA ATPase phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover -1 72573 73781
YP_009202471.1 NC_028843_p84 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 56211 57509
YP_009202467.1 NC_028843_p80 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 54769 55266
YP_009202420.1 NC_028843_p33 Nucleotidyltransferase phrog_388 nucleotidyltransferase DNA, RNA and nucleotide metabolism -1 29417 30157
YP_009202486.1 NC_028843_p99 hypothetical protein phrog_14116 unknown function unknown function 1 62459 62716
YP_009202437.1 NC_028843_p50 hypothetical protein phrog_2380 unknown function unknown function 1 39894 40139
YP_009202456.1 NC_028843_p69 hypothetical protein phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 49299 49580
YP_009202443.1 NC_028843_p56 hypothetical protein phrog_17581 unknown function unknown function 1 43112 43264
YP_009202413.1 NC_028843_p26 Lysin A phrog_317 endolysin lysis 1 24741 26216
YP_009202484.1 NC_028843_p97 hypothetical protein phrog_3699 unknown function unknown function 1 62136 62363
YP_009202424.1 NC_028843_p37 hypothetical protein phrog_950 unknown function unknown function -1 32987 33775
YP_009202489.1 NC_028843_p102 hypothetical protein phrog_19018 unknown function unknown function 1 63345 63518
YP_009202477.1 NC_028843_p90 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 59420 59827
YP_009202470.1 NC_028843_p83 hypothetical protein phrog_15155 unknown function unknown function 1 55882 56214
YP_009202411.1 NC_028843_p24 hypothetical protein phrog_3856 minor tail protein tail 1 23667 24608
YP_009202488.1 NC_028843_p101 hypothetical protein phrog_10290 unknown function unknown function 1 62957 63145
YP_009202391.1 NC_028843_p4 hypothetical protein phrog_17068 unknown function unknown function 1 1038 1196
YP_009202394.1 NC_028843_p7 hypothetical protein phrog_193 head maturation protease head and packaging 1 4422 5492
YP_009202490.1 NC_028843_p103 hypothetical protein phrog_26254 unknown function unknown function 1 64003 64269
YP_009202426.1 NC_028843_p39 hypothetical protein phrog_1702 transcriptional repressor transcription regulation 1 34550 34762
YP_009202435.1 NC_028843_p48 hypothetical protein phrog_200 lipoprotein other 1 38388 39320
YP_009202398.1 NC_028843_p11 hypothetical protein phrog_5309 head-tail adaptor connector 1 7851 8189
YP_009202446.1 NC_028843_p59 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 43839 44576
YP_009202414.1 NC_028843_p27 hypothetical protein phrog_526 holin lysis 1 26216 26617
YP_009202416.1 NC_028843_p29 hypothetical protein phrog_5963 holin lysis 1 27674 28135
YP_009202421.1 NC_028843_p34 Lsr2 DNA binding protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 30253 30693
YP_009202513.1 NC_028843_p126 hypothetical protein phrog_16092 unknown function unknown function -1 74237 74440
YP_009202498.1 NC_028843_p111 hypothetical protein phrog_6230 unknown function unknown function -1 67395 67634
YP_009202452.1 NC_028843_p65 hypothetical protein phrog_2693 unknown function unknown function 1 46603 47064
YP_009202479.1 NC_028843_p92 hypothetical protein phrog_4472 nucleotide kinase other 1 60161 60502
YP_009202515.1 NC_028843_p128 hypothetical protein singleton unknown function unknown function -1 74823 75149
YP_009202485.1 NC_028843_p98 hypothetical protein phrog_6027 unknown function unknown function 1 62356 62475
YP_009202425.1 NC_028843_p38 Immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 33941 34324
YP_009202399.1 NC_028843_p12 hypothetical protein phrog_5775 head-tail connector protein connector 1 8189 8605
YP_009202454.1 NC_028843_p67 hypothetical protein phrog_12888 unknown function unknown function 1 47737 48036
YP_009202516.1 NC_028843_p129 hypothetical protein singleton unknown function unknown function -1 75133 75279
YP_009202440.1 NC_028843_p53 RNA binding protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism 1 40643 42082
YP_009202461.1 NC_028843_p74 hypothetical protein phrog_505 polynucleotide kinase other 1 52419 53354
YP_009202483.1 NC_028843_p96 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 61717 62136
YP_009202449.1 NC_028843_p62 hypothetical protein phrog_7527 unknown function unknown function 1 45642 45935
YP_009202473.1 NC_028843_p86 hypothetical protein phrog_7495 unknown function unknown function 1 58162 58707
YP_009202475.1 NC_028843_p88 hypothetical protein phrog_2218 unknown function unknown function 1 58809 59039
YP_009202407.1 NC_028843_p20 Minor tail protein phrog_4413 minor tail protein tail 1 19079 19528
YP_009202396.1 NC_028843_p9 Major Capsid phrog_283 major head protein head and packaging 1 6207 7367
YP_009202478.1 NC_028843_p91 hypothetical protein phrog_1042 unknown function unknown function 1 59914 60183
YP_009202455.1 NC_028843_p68 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 48037 49302
YP_009202395.1 NC_028843_p8 Scaffolding protein phrog_3760 head scaffolding protein head and packaging 1 5548 6147
YP_009202442.1 NC_028843_p55 hypothetical protein phrog_5872 unknown function unknown function 1 42798 43115
YP_009202491.1 NC_028843_p104 hypothetical protein singleton unknown function unknown function -1 64419 64766
YP_009202404.1 NC_028843_p17 Tape measure phrog_3547 tail length tape measure protein tail 1 10976 16219
YP_009202514.1 NC_028843_p127 hypothetical protein phrog_26014 unknown function unknown function -1 74467 74694
YP_009202401.1 NC_028843_p14 Major Tail phrog_476 major tail protein tail 1 9130 10029
YP_009202400.1 NC_028843_p13 hypothetical protein phrog_123 tail terminator connector 1 8615 9100
YP_009202462.1 NC_028843_p75 Polynucleotide kinase phrog_6064 unknown function unknown function 1 53354 53536
YP_009202511.1 NC_028843_p124 hypothetical protein singleton unknown function unknown function -1 73908 74030
YP_009202500.1 NC_028843_p113 hypothetical protein phrog_3777 unknown function unknown function -1 68594 68974
YP_009202432.1 NC_028843_p45 hypothetical protein phrog_17914 unknown function unknown function 1 37643 37861
YP_009202476.1 NC_028843_p89 hypothetical protein phrog_1969 unknown function unknown function 1 59032 59370
YP_009202433.1 NC_028843_p46 hypothetical protein phrog_6017 unknown function unknown function 1 37851 38165
YP_009202438.1 NC_028843_p51 hypothetical protein phrog_1498 unknown function unknown function 1 40240 40398
YP_009202402.1 NC_028843_p15 Tail assembly chaperone phrog_4464 tail assembly chaperone tail 1 10131 10406
YP_009202431.1 NC_028843_p44 hypothetical protein phrog_1649 metallo-phosphoesterase other 1 36834 37643
YP_009202445.1 NC_028843_p58 hypothetical protein phrog_7425 unknown function unknown function 1 43408 43599
YP_009202451.1 NC_028843_p64 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46290 46622
YP_009202409.1 NC_028843_p22 Minor tail protein phrog_416 minor tail protein tail 1 22045 23244
YP_009202469.1 NC_028843_p82 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 55730 55885
YP_009202492.1 NC_028843_p105 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 64846 65553
YP_009202508.1 NC_028843_p121 hypothetical protein phrog_1909 unknown function unknown function -1 71386 72213
YP_009202506.1 NC_028843_p119 hypothetical protein phrog_6176 unknown function unknown function 1 70414 70872
YP_009202482.1 NC_028843_p95 hypothetical protein phrog_397 unknown function unknown function 1 61453 61587
YP_009202460.1 NC_028843_p73 Nicotinamide ribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other 1 50858 52333
YP_009202465.1 NC_028843_p78 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 54161 54481
YP_009202499.1 NC_028843_p112 hypothetical protein phrog_1909 unknown function unknown function -1 67663 68523
YP_009202502.1 NC_028843_p115 hypothetical protein phrog_7390 unknown function unknown function -1 69220 69414
YP_009202458.1 NC_028843_p71 hypothetical protein phrog_6206 unknown function unknown function 1 49879 50028