| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028848 |
Definition |
Acinetobacter phage Fri1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Beijerinckvirinae; Friunavirus. |
DB of origin |
REFSEQ |
Length |
41805 |
Host Name |
Acinetobacter baumannii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
39.28 |
Number of singletons |
4 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009203022.1 | NC_028848_p16 | hypothetical protein | phrog_2827 | unknown function | unknown function | 1 | 5780 | 6010 |
| YP_009203008.1 | NC_028848_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1132 | 1308 |
| YP_009203046.1 | NC_028848_p40 | scaffold protein | phrog_1018 | head scaffolding protein | head and packaging | 1 | 23364 | 24224 |
| YP_009203037.1 | NC_028848_p31 | tRNA nucleotidyltransferase | phrog_1614 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | 1 | 15996 | 16559 |
| YP_009203044.1 | NC_028848_p38 | hypothetical protein | phrog_4893 | unknown function | unknown function | 1 | 21539 | 21790 |
| YP_009203024.1 | NC_028848_p18 | hypothetical protein | phrog_17267 | unknown function | unknown function | 1 | 7009 | 7197 |
| YP_009203021.1 | NC_028848_p15 | hypothetical protein | phrog_7955 | unknown function | unknown function | 1 | 5595 | 5783 |
| YP_009203020.1 | NC_028848_p14 | hypothetical protein | phrog_7079 | unknown function | unknown function | 1 | 5441 | 5608 |
| YP_009203045.1 | NC_028848_p39 | head-tail connector protein | phrog_449 | head-tail adaptor | connector | 1 | 21799 | 23355 |
| YP_009203025.1 | NC_028848_p19 | hypothetical protein | phrog_7630 | unknown function | unknown function | 1 | 7197 | 7517 |
| YP_009203053.1 | NC_028848_p47 | internal virion protein B | phrog_2083 | internal virion lysozyme motif | head and packaging | 1 | 29486 | 32371 |
| YP_009203035.1 | NC_028848_p29 | hypothetical protein | phrog_10210 | unknown function | unknown function | 1 | 14901 | 15020 |
| YP_009203041.1 | NC_028848_p35 | dNMP kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 18169 | 18816 |
| YP_009203055.1 | NC_028848_p49 | tail spike protein | phrog_38440 | tail spike protein | tail | 1 | 35486 | 37837 |
| YP_009203029.1 | NC_028848_p23 | ATP-dependent DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 9804 | 10757 |
| YP_009203031.1 | NC_028848_p25 | HNH family endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11793 | 12281 |
| YP_009203047.1 | NC_028848_p41 | capsid protein | phrog_267 | major head protein | head and packaging | 1 | 24240 | 25277 |
| YP_009203026.1 | NC_028848_p20 | hypothetical protein | phrog_7038 | unknown function | unknown function | 1 | 7517 | 7759 |
| YP_009203049.1 | NC_028848_p43 | hypothetical protein | phrog_7599 | unknown function | unknown function | 1 | 25530 | 25823 |
| YP_009203051.1 | NC_028848_p45 | tail tubular protein B | phrog_457 | tail protein | tail | 1 | 26511 | 28802 |
| YP_009203012.1 | NC_028848_p6 | hypothetical protein | phrog_6323 | unknown function | unknown function | 1 | 2855 | 3229 |
| YP_009203011.1 | NC_028848_p5 | hypothetical protein | phrog_19151 | unknown function | unknown function | 1 | 2578 | 2853 |
| YP_009203048.1 | NC_028848_p42 | hypothetical protein | phrog_6633 | tail protein | tail | 1 | 25333 | 25518 |
| YP_009203036.1 | NC_028848_p30 | 5'-3' exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 15053 | 16006 |
| YP_009203010.1 | NC_028848_p4 | hypothetical protein | phrog_1448 | unknown function | unknown function | 1 | 2025 | 2576 |
| YP_009203028.1 | NC_028848_p22 | hypothetical protein | phrog_14634 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 9067 | 9807 |
| YP_009203014.1 | NC_028848_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3630 | 3779 |
| YP_009203013.1 | NC_028848_p7 | hypothetical protein | phrog_4445 | unknown function | unknown function | 1 | 3320 | 3544 |
| YP_009203060.1 | NC_028848_p54 | hypothetical protein | phrog_6687 | unknown function | unknown function | 1 | 41133 | 41336 |
| YP_009203019.1 | NC_028848_p13 | hypothetical protein | phrog_7359 | unknown function | unknown function | 1 | 4996 | 5430 |
| YP_009203052.1 | NC_028848_p46 | internal virion protein A | phrog_6056 | internal virion protein | head and packaging | 1 | 28802 | 29473 |
| YP_009203034.1 | NC_028848_p28 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 13954 | 14844 |
| YP_009203042.1 | NC_028848_p36 | DNA-directed RNA-polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 18825 | 21242 |
| YP_009203015.1 | NC_028848_p9 | hypothetical protein | phrog_9054 | unknown function | unknown function | 1 | 3767 | 3880 |
| YP_009203009.1 | NC_028848_p3 | hypothetical protein | phrog_17142 | unknown function | unknown function | 1 | 1745 | 1996 |
| YP_009203054.1 | NC_028848_p48 | internal virion protein C | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 32381 | 35479 |
| YP_009203043.1 | NC_028848_p37 | hypothetical protein | phrog_5394 | unknown function | unknown function | 1 | 21345 | 21542 |
| YP_009203016.1 | NC_028848_p10 | hypothetical protein | phrog_13611 | unknown function | unknown function | 1 | 3867 | 4034 |
| YP_009203032.1 | NC_028848_p26 | DNA-directed DNA polymerase domain | phrog_2573 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 12274 | 13734 |
| YP_009203058.1 | NC_028848_p52 | DNA maturase A | phrog_891 | terminase small subunit | head and packaging | 1 | 38787 | 39095 |
| YP_009203057.1 | NC_028848_p51 | endolysin | phrog_181 | endolysin | lysis | 1 | 38170 | 38727 |
| YP_009203017.1 | NC_028848_p11 | hypothetical protein | phrog_6769 | unknown function | unknown function | 1 | 4039 | 4437 |
| YP_009203023.1 | NC_028848_p17 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 6180 | 6887 |
| YP_009203039.1 | NC_028848_p33 | phosphodiestherase | phrog_221 | metallo-phosphoesterase | other | 1 | 17005 | 17934 |
| YP_009203027.1 | NC_028848_p21 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 7772 | 9070 |
| YP_009203059.1 | NC_028848_p53 | DNA maturase B | phrog_38 | terminase large subunit | head and packaging | 1 | 39105 | 41042 |
| YP_009203033.1 | NC_028848_p27 | hypothetical protein | phrog_32097 | unknown function | unknown function | 1 | 13724 | 13957 |
| YP_009203038.1 | NC_028848_p32 | DNA endonuclease VII | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 16561 | 17001 |
| YP_009203040.1 | NC_028848_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17921 | 18169 |
| YP_009203030.1 | NC_028848_p24 | DNA-directed DNA polymerase domain | phrog_9556 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 11006 | 11860 |
| YP_009203007.1 | NC_028848_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 945 | 1130 |
| YP_009203056.1 | NC_028848_p50 | holin | phrog_126 | holin/anti-holin | lysis | 1 | 37848 | 38183 |
| YP_009203050.1 | NC_028848_p44 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 25942 | 26490 |
| YP_009203018.1 | NC_028848_p12 | hypothetical protein | phrog_6421 | unknown function | unknown function | 1 | 4508 | 4996 |