Genomic map of Mycobacterium phage Luchador (NC_028849)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028849
Definition
Mycobacterium phage Luchador, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
53387
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
96
%GC
62.11
Number of singletons
9
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009203118.1 NC_028849_p58 hypothetical protein phrog_2436 unknown function unknown function -1 38522 38674
YP_009203103.1 NC_028849_p43 hypothetical protein phrog_9466 unknown function unknown function -1 30424 30648
YP_009203116.1 NC_028849_p56 hypothetical protein phrog_499 unknown function unknown function -1 37528 37767
YP_009203152.1 NC_028849_p92 hypothetical protein singleton unknown function unknown function -1 50334 50531
YP_009203143.1 NC_028849_p83 hypothetical protein phrog_855 unknown function unknown function -1 47817 47960
YP_009203075.1 NC_028849_p15 major capsid protein phrog_10 major head protein head and packaging 1 12226 13173
YP_009203132.1 NC_028849_p72 hypothetical protein phrog_520 unknown function unknown function -1 43659 43928
YP_009203079.1 NC_028849_p19 head-to-tail connector phrog_830 head-tail connector protein connector 1 14084 14293
YP_009203136.1 NC_028849_p76 hypothetical protein phrog_1562 unknown function unknown function -1 45159 45554
YP_009203144.1 NC_028849_p84 hypothetical protein phrog_3718 unknown function unknown function -1 47965 48225
YP_009203080.1 NC_028849_p20 head-to-tail connector phrog_320 head closure Hc1 connector 1 14290 14658
YP_009203100.1 NC_028849_p40 hypothetical protein singleton unknown function unknown function -1 29897 30058
YP_009203093.1 NC_028849_p33 hypothetical protein phrog_416 minor tail protein tail 1 25731 26627
YP_009203063.1 NC_028849_p3 hypothetical protein phrog_3585 immunity protein other 1 2067 2405
YP_009203130.1 NC_028849_p70 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42552 43298
YP_009203115.1 NC_028849_p55 hypothetical protein phrog_2046 unknown function unknown function -1 37328 37531
YP_009203099.1 NC_028849_p39 hypothetical protein singleton unknown function unknown function -1 29733 29900
YP_009203098.1 NC_028849_p38 ParB phrog_2639 Arc-like repressor transcription regulation 1 29268 29537
YP_009203145.1 NC_028849_p85 hypothetical protein phrog_2355 unknown function unknown function -1 48290 48736
YP_009203150.1 NC_028849_p90 hypothetical protein singleton unknown function unknown function -1 49736 50098
YP_009203065.1 NC_028849_p5 hypothetical protein phrog_226 minor tail protein tail 1 2735 3208
YP_009203156.1 NC_028849_p96 hypothetical protein phrog_1676 unknown function unknown function -1 51730 52062
YP_009203062.1 NC_028849_p2 hypothetical protein phrog_5234 unknown function unknown function 1 1039 2088
YP_009203090.1 NC_028849_p30 minor tail protein phrog_352 minor tail protein tail 1 22469 22918
YP_009203109.1 NC_028849_p49 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 31952 33745
YP_009203097.1 NC_028849_p37 ParA phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 28694 29275
YP_009203094.1 NC_028849_p34 hypothetical protein phrog_240 head protein head and packaging 1 26637 27029
YP_009203069.1 NC_028849_p9 holin phrog_526 holin lysis 1 6145 6531
YP_009203087.1 NC_028849_p27 minor tail protein phrog_106 minor tail protein tail 1 19388 20410
YP_009203123.1 NC_028849_p63 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 40782 41264
YP_009203120.1 NC_028849_p60 hypothetical protein phrog_1167 phosphofructokinase other -1 39442 39939
YP_009203081.1 NC_028849_p21 head-to-tail connector phrog_321 tail completion or Neck1 protein connector 1 14658 14993
YP_009203108.1 NC_028849_p48 hypothetical protein phrog_3771 unknown function unknown function -1 31610 31942
YP_009203076.1 NC_028849_p16 hypothetical protein singleton unknown function unknown function 1 13267 13500
YP_009203064.1 NC_028849_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2402 2698
YP_009203135.1 NC_028849_p75 RecB-like recombinase phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44356 45162
YP_009203125.1 NC_028849_p65 hypothetical protein phrog_1498 unknown function unknown function -1 41346 41501
YP_009203067.1 NC_028849_p7 hypothetical protein phrog_1087 unknown function unknown function 1 4428 4568
YP_009203147.1 NC_028849_p87 hypothetical protein phrog_3351 unknown function unknown function -1 49115 49336
YP_009203154.1 NC_028849_p94 hypothetical protein phrog_1392 unknown function unknown function -1 50694 51404
YP_009203061.1 NC_028849_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 369 1055
YP_009203119.1 NC_028849_p59 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 38678 39445
YP_009203077.1 NC_028849_p17 head-to-tail connector phrog_3101 unknown function unknown function 1 13500 13706
YP_009203092.1 NC_028849_p32 minor tail protein phrog_737 minor tail protein tail 1 23273 25723
YP_009203117.1 NC_028849_p57 DNA binding protein phrog_354 sigma-K factor transcription regulation -1 37764 38522
YP_009203073.1 NC_028849_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10757 11635
YP_009203149.1 NC_028849_p89 hypothetical protein phrog_1946 unknown function unknown function -1 49500 49724
YP_009203091.1 NC_028849_p31 minor tail protein phrog_404 minor tail protein tail 1 22915 23271
YP_009203141.1 NC_028849_p81 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47087 47356
YP_009203139.1 NC_028849_p79 hypothetical protein singleton unknown function unknown function -1 46628 46891
YP_009203121.1 NC_028849_p61 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 39939 40565
YP_009203085.1 NC_028849_p25 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 16146 16547
YP_009203101.1 NC_028849_p41 hypothetical protein phrog_13926 unknown function unknown function -1 30055 30267
YP_009203114.1 NC_028849_p54 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 35289 37328
YP_009203131.1 NC_028849_p71 hypothetical protein phrog_2903 unknown function unknown function -1 43360 43662
YP_009203096.1 NC_028849_p36 hypothetical protein phrog_4480 unknown function unknown function 1 27458 27769
YP_009203083.1 NC_028849_p23 major tail subunit phrog_117 major tail protein tail 1 15438 16031
YP_009203155.1 NC_028849_p95 hypothetical protein phrog_2499 unknown function unknown function -1 51407 51613
YP_009203127.1 NC_028849_p67 hypothetical protein phrog_397 unknown function unknown function -1 41829 41978
YP_009203105.1 NC_028849_p45 hypothetical protein phrog_3283 unknown function unknown function -1 31016 31237
YP_009203133.1 NC_028849_p73 hypothetical protein singleton unknown function unknown function -1 43925 44089
YP_009203071.1 NC_028849_p11 terminase phrog_9 terminase large subunit head and packaging 1 7549 9303
YP_009203129.1 NC_028849_p69 hypothetical protein phrog_1374 unknown function unknown function -1 42328 42522
YP_009203126.1 NC_028849_p66 HTH DNA binding domain protein phrog_1123 unknown function unknown function -1 41572 41832
YP_009203089.1 NC_028849_p29 minor tail protein phrog_110 minor tail protein tail 1 20622 22421
YP_009203142.1 NC_028849_p82 SprT phrog_1006 unknown function unknown function -1 47353 47820
YP_009203137.1 NC_028849_p77 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45567 46094
YP_009203134.1 NC_028849_p74 hypothetical protein phrog_642 unknown function unknown function -1 44086 44307
YP_009203086.1 NC_028849_p26 hypothetical protein phrog_305 tail length tape measure protein tail 1 16953 19361
YP_009203153.1 NC_028849_p93 hypothetical protein phrog_6093 unknown function unknown function -1 50528 50686
YP_009203068.1 NC_028849_p8 lysin A phrog_317 endolysin lysis 1 4568 6148
YP_009203146.1 NC_028849_p86 hypothetical protein phrog_586 unknown function unknown function -1 48765 49118
YP_009203113.1 NC_028849_p53 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34750 35277
YP_009203148.1 NC_028849_p88 hypothetical protein phrog_519 unknown function unknown function -1 49336 49503
YP_009203151.1 NC_028849_p91 hypothetical protein phrog_10592 unknown function unknown function -1 50107 50337
YP_009203072.1 NC_028849_p12 portal protein phrog_104 portal protein head and packaging 1 9300 10760
YP_009203128.1 NC_028849_p68 hypothetical protein phrog_5101 unknown function unknown function -1 42044 42331
YP_009203084.1 NC_028849_p24 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 16146 16960
YP_009203082.1 NC_028849_p22 head-to-tail connector phrog_123 tail terminator connector 1 15003 15419
YP_009203104.1 NC_028849_p44 hypothetical protein phrog_383 unknown function unknown function -1 30645 31016
YP_009203078.1 NC_028849_p18 head-to-tail connector phrog_137 head-tail adaptor Ad1 connector 1 13710 14087
YP_009203122.1 NC_028849_p62 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 40399 40785
YP_009203095.1 NC_028849_p35 Lsr2 phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism 1 27109 27465
YP_009203066.1 NC_028849_p6 structural protein phrog_1260 minor tail protein tail 1 3290 4267
YP_009203110.1 NC_028849_p50 hypothetical protein phrog_2094 unknown function unknown function -1 33753 34088
YP_009203070.1 NC_028849_p10 lysin B phrog_102 endolysin lysis 1 6567 7526
YP_009203088.1 NC_028849_p28 hypothetical protein phrog_1543 minor tail protein tail 1 20407 20622
YP_009203106.1 NC_028849_p46 hypothetical protein singleton unknown function unknown function -1 31237 31392
YP_009203124.1 NC_028849_p64 hypothetical protein phrog_2187 unknown function unknown function -1 41215 41349
YP_009203107.1 NC_028849_p47 hypothetical protein phrog_896 unknown function unknown function -1 31389 31613
YP_009203138.1 NC_028849_p78 hypothetical protein phrog_1173 unknown function unknown function -1 46443 46628
YP_009203102.1 NC_028849_p42 hypothetical protein singleton unknown function unknown function -1 30260 30427
YP_009203111.1 NC_028849_p51 HTH DNA binding protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 34088 34435
YP_009203140.1 NC_028849_p80 hypothetical protein phrog_8086 unknown function unknown function -1 46866 47087
YP_009203074.1 NC_028849_p14 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 11684 12196
YP_009203112.1 NC_028849_p52 hypothetical protein phrog_690 unknown function unknown function -1 34419 34634