| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028850 |
Definition |
Yersinia phage vB_YenP_ISAO8, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Melnykvirinae; Aghbyvirus; Yersinia virus ISAO8. |
DB of origin |
REFSEQ |
Length |
41449 |
Host Name |
Yersinia enterocolitica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
46 |
%GC |
53.83 |
Number of singletons |
4 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009203165.1 | NC_028850_p9 | hypothetical protein | phrog_9577 | unknown function | unknown function | 1 | 4480 | 4812 |
| YP_009203166.1 | NC_028850_p10 | hypothetical protein | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | 1 | 4814 | 5176 |
| YP_009203158.1 | NC_028850_p2 | hypothetical protein | phrog_1448 | unknown function | unknown function | 1 | 1896 | 2426 |
| YP_009203176.1 | NC_028850_p20 | DNA exonuclease | singleton | unknown function | unknown function | 1 | 12964 | 13551 |
| YP_009203192.1 | NC_028850_p36 | internal core protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 29484 | 31835 |
| YP_009203180.1 | NC_028850_p24 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 15672 | 16274 |
| YP_009203172.1 | NC_028850_p16 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 8285 | 9199 |
| YP_009203162.1 | NC_028850_p6 | hypothetical protein | phrog_11917 | unknown function | unknown function | 1 | 3517 | 3693 |
| YP_009203202.1 | NC_028850_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41211 | 41351 |
| YP_009203194.1 | NC_028850_p38 | tail fiber protein | phrog_7760 | tail fiber protein | tail | 1 | 33298 | 34107 |
| YP_009203201.1 | NC_028850_p45 | hypothetical protein | phrog_214 | Rz-like spanin | lysis | 1 | 40847 | 41179 |
| YP_009203178.1 | NC_028850_p22 | DNA endonuclease | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 13950 | 14381 |
| YP_009203200.1 | NC_028850_p44 | lysin | phrog_7 | endolysin | lysis | 1 | 40326 | 40883 |
| YP_009203170.1 | NC_028850_p14 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 6622 | 7866 |
| YP_009203171.1 | NC_028850_p15 | hypothetical protein | phrog_13874 | unknown function | unknown function | 1 | 7876 | 8100 |
| YP_009203159.1 | NC_028850_p3 | hypothetical protein | phrog_8471 | unknown function | unknown function | 1 | 2489 | 2776 |
| YP_009203173.1 | NC_028850_p17 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 9290 | 11734 |
| YP_009203164.1 | NC_028850_p8 | hypothetical protein | phrog_28110 | unknown function | unknown function | 1 | 4091 | 4480 |
| YP_009203181.1 | NC_028850_p25 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 16287 | 18710 |
| YP_009203168.1 | NC_028850_p12 | hypothetical protein | phrog_11140 | unknown function | unknown function | 1 | 5516 | 5824 |
| YP_009203169.1 | NC_028850_p13 | DNA primase | phrog_8634 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 5963 | 6643 |
| YP_009203187.1 | NC_028850_p31 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 22225 | 23256 |
| YP_009203161.1 | NC_028850_p5 | hypothetical protein | phrog_18383 | unknown function | unknown function | 1 | 3095 | 3520 |
| YP_009203177.1 | NC_028850_p21 | hypothetical protein | phrog_9561 | unknown function | unknown function | 1 | 13553 | 13963 |
| YP_009203175.1 | NC_028850_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12641 | 12925 |
| YP_009203185.1 | NC_028850_p29 | head portal protein | phrog_449 | head-tail adaptor | connector | 1 | 19865 | 21355 |
| YP_009203190.1 | NC_028850_p34 | hypothetical protein | phrog_5745 | internal virion protein | head and packaging | 1 | 26454 | 27227 |
| YP_009203193.1 | NC_028850_p37 | internal core protein | singleton | unknown function | unknown function | 1 | 31808 | 33247 |
| YP_009203174.1 | NC_028850_p18 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 11790 | 12617 |
| YP_009203199.1 | NC_028850_p43 | hypothetical protein | phrog_38617 | unknown function | unknown function | 1 | 39326 | 40321 |
| YP_009203179.1 | NC_028850_p23 | hypothetical protein | phrog_221 | metallo-phosphoesterase | other | 1 | 14381 | 15355 |
| YP_009203189.1 | NC_028850_p33 | tail tubular protein B | phrog_457 | tail protein | tail | 1 | 23896 | 26451 |
| YP_009203183.1 | NC_028850_p27 | hypothetical protein | phrog_2746 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 19051 | 19443 |
| YP_009203157.1 | NC_028850_p1 | hypothetical protein | phrog_9286 | unknown function | unknown function | 1 | 1023 | 1328 |
| YP_009203198.1 | NC_028850_p42 | DNA packaging protein | phrog_38 | terminase large subunit | head and packaging | 1 | 37440 | 39329 |
| YP_009203160.1 | NC_028850_p4 | hypothetical protein | phrog_6379 | unknown function | unknown function | 1 | 2836 | 3102 |
| YP_009203167.1 | NC_028850_p11 | hypothetical protein | phrog_5965 | unknown function | unknown function | 1 | 5265 | 5516 |
| YP_009203188.1 | NC_028850_p32 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 23304 | 23894 |
| YP_009203197.1 | NC_028850_p41 | hypothetical protein | phrog_9441 | terminase small subunit | head and packaging | 1 | 37078 | 37437 |
| YP_009203195.1 | NC_028850_p39 | glycosyl hydrolase | phrog_2871 | tail protein | tail | 1 | 34100 | 36892 |
| YP_009203191.1 | NC_028850_p35 | hypothetical protein | phrog_3883 | internal virion protein | head and packaging | 1 | 27237 | 29474 |
| YP_009203186.1 | NC_028850_p30 | scaffolding protein | phrog_1018 | head scaffolding protein | head and packaging | 1 | 21355 | 22152 |
| YP_009203184.1 | NC_028850_p28 | hypothetical protein | phrog_6529 | unknown function | unknown function | 1 | 19436 | 19855 |
| YP_009203196.1 | NC_028850_p40 | holin | phrog_920 | holin | lysis | 1 | 36894 | 37088 |
| YP_009203182.1 | NC_028850_p26 | hypothetical protein | phrog_5112 | unknown function | unknown function | 1 | 18836 | 19006 |
| YP_009203163.1 | NC_028850_p7 | hypothetical protein | phrog_2226 | SAM-dependent methyltransferase | other | 1 | 3695 | 4081 |