Genomic map of Mannheimia phage vB_MhS_535AP2 (NC_028853)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028853
Definition
Mannheimia phage vB_MhS_535AP2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
50078
Host Name
Mannheimia haemolytica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
41.3
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009203442.1 NC_028853_p76 lytic protein Rz phrog_214 Rz-like spanin lysis 1 49159 49509
YP_009203373.1 NC_028853_p7 hypothetical protein phrog_771 virion structural protein head and packaging 1 5793 6782
YP_009203392.1 NC_028853_p26 tail assembly protein I phrog_32 tail assembly protein tail 1 16894 17523
YP_009203421.1 NC_028853_p55 hypothetical protein phrog_4293 unknown function unknown function -1 40299 40679
YP_009203445.1 NC_028853_p79 hypothetical protein phrog_8452 unknown function unknown function 1 49909 50064
YP_009203430.1 NC_028853_p64 hypothetical protein phrog_319 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 45366 45872
YP_009203394.1 NC_028853_p28 hypothetical protein phrog_24617 unknown function unknown function 1 24255 24701
YP_009203387.1 NC_028853_p21 minor tail protein M phrog_14 minor tail protein tail 1 14367 14696
YP_009203431.1 NC_028853_p65 hypothetical protein phrog_11301 unknown function unknown function 1 45932 46135
YP_009203426.1 NC_028853_p60 replication protein O phrog_5810 replication initiation protein DNA, RNA and nucleotide metabolism 1 42355 43185
YP_009203415.1 NC_028853_p49 hypothetical protein phrog_20537 unknown function unknown function -1 36792 37028
YP_009203401.1 NC_028853_p35 integrase phrog_1 integrase integration and excision 1 27926 28915
YP_009203427.1 NC_028853_p61 helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 43182 44543
YP_009203420.1 NC_028853_p54 hypothetical protein phrog_12015 unknown function unknown function -1 39809 40294
YP_009203425.1 NC_028853_p59 hypothetical protein phrog_12173 unknown function unknown function 1 42170 42340
YP_009203385.1 NC_028853_p19 hypothetical protein phrog_13701 unknown function unknown function 1 11391 11735
YP_009203396.1 NC_028853_p30 hypothetical protein phrog_14212 unknown function unknown function 1 25416 25709
YP_009203414.1 NC_028853_p48 hypothetical protein phrog_18123 unknown function unknown function -1 35717 36223
YP_009203405.1 NC_028853_p39 hypothetical protein phrog_14017 unknown function unknown function -1 30635 30838
YP_009203437.1 NC_028853_p71 hypothetical protein phrog_11765 unknown function unknown function 1 47855 48040
YP_009203407.1 NC_028853_p41 pyruvate kinase phrog_9552 kinase other -1 31440 31892
YP_009203432.1 NC_028853_p66 hypothetical protein phrog_12445 unknown function unknown function 1 46181 46375
YP_009203372.1 NC_028853_p6 hypothetical protein phrog_766 head decoration head and packaging 1 5344 5778
YP_009203383.1 NC_028853_p17 hypothetical protein phrog_7561 unknown function unknown function -1 10463 10732
YP_009203384.1 NC_028853_p18 hypothetical protein phrog_13311 unknown function unknown function 1 10865 11323
YP_009203403.1 NC_028853_p37 methyltransferase phrog_954 DNA methyltransferase other -1 29196 29687
YP_009203443.1 NC_028853_p77 lytic protein Rz1 phrog_456 Rz-like spanin lysis 1 49514 49687
YP_009203377.1 NC_028853_p11 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 7762 8130
YP_009203393.1 NC_028853_p27 host specificity protein J phrog_31 central tail fiber J tail 1 17533 24258
YP_009203413.1 NC_028853_p47 hypothetical protein phrog_18413 unknown function unknown function -1 35354 35713
YP_009203386.1 NC_028853_p20 tail length tape measure protein phrog_1538 tail length tape measure protein tail 1 11868 14363
YP_009203374.1 NC_028853_p8 hypothetical protein phrog_13988 unknown function unknown function 1 6794 7036
YP_009203369.1 NC_028853_p3 portal protein phrog_146 portal protein head and packaging 1 1726 3102
YP_009203400.1 NC_028853_p34 hypothetical protein phrog_16984 unknown function unknown function -1 26844 27434
YP_009203409.1 NC_028853_p43 recombinase phrog_10056 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 32734 33528
YP_009203402.1 NC_028853_p36 hypothetical protein phrog_4996 unknown function unknown function -1 28912 29169
YP_009203376.1 NC_028853_p10 hypothetical protein phrog_797 unknown function unknown function 1 7416 7760
YP_009203434.1 NC_028853_p68 NinG protein phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 46503 47072
YP_009203399.1 NC_028853_p33 hypothetical protein phrog_12690 unknown function unknown function -1 26256 26774
YP_009203382.1 NC_028853_p16 hypothetical protein phrog_791 unknown function unknown function 1 9783 10448
YP_009203411.1 NC_028853_p45 hypothetical protein phrog_17268 unknown function unknown function -1 34532 34744
YP_009203406.1 NC_028853_p40 hypothetical protein phrog_7704 unknown function unknown function -1 30835 31362
YP_009203433.1 NC_028853_p67 hypothetical protein phrog_12212 unknown function unknown function 1 46388 46510
YP_009203438.1 NC_028853_p72 hypothetical protein phrog_19968 unknown function unknown function 1 48066 48236
YP_009203435.1 NC_028853_p69 antitermination protein Q phrog_943 anti-termination protein Q-like transcription regulation 1 47062 47535
YP_009203380.1 NC_028853_p14 toxin-antitoxin system antitoxin component HicB phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover -1 9033 9449
YP_009203381.1 NC_028853_p15 toxin-antitoxin system antitoxin component HicA phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 9505 9681
YP_009203371.1 NC_028853_p5 hypothetical protein phrog_760 unknown function unknown function 1 3981 5351
YP_009203370.1 NC_028853_p4 head morphogenesis protein phrog_758 head morphogenesis head and packaging 1 3056 3994
YP_009203441.1 NC_028853_p75 endolysin phrog_7 endolysin lysis 1 48617 49186
YP_009203389.1 NC_028853_p23 minor tail protein L phrog_18 minor tail protein tail 1 15174 15890
YP_009203416.1 NC_028853_p50 hypothetical protein phrog_12192 unknown function unknown function -1 37410 37640
YP_009203397.1 NC_028853_p31 hypothetical protein singleton unknown function unknown function 1 25718 25882
YP_009203378.1 NC_028853_p12 hypothetical protein phrog_782 unknown function unknown function 1 8127 8507
YP_009203367.1 NC_028853_p1 terminase, small subunit phrog_51 terminase small subunit head and packaging 1 1 525
YP_009203412.1 NC_028853_p46 hypothetical protein phrog_13811 unknown function unknown function -1 34878 35357
YP_009203428.1 NC_028853_p62 methyltransferase phrog_359 DNA methyltransferase other 1 44540 45076
YP_009203408.1 NC_028853_p42 exonuclease phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 32102 32737
YP_009203388.1 NC_028853_p22 minor tail protein L phrog_2959 minor tail protein tail 1 14696 15166
YP_009203436.1 NC_028853_p70 hypothetical protein phrog_25131 unknown function unknown function 1 47733 47849
YP_009203440.1 NC_028853_p74 holin phrog_20 holin lysis 1 48379 48624
YP_009203423.1 NC_028853_p57 Cro repressor phrog_3 transcriptional repressor transcription regulation 1 41453 41725
YP_009203398.1 NC_028853_p32 hypothetical protein phrog_18203 unknown function unknown function 1 25882 26109
YP_009203379.1 NC_028853_p13 major tail protein phrog_1407 major tail protein tail 1 8511 8993
YP_009203391.1 NC_028853_p25 hypothetical protein phrog_13775 unknown function unknown function 1 16766 16891
YP_009203439.1 NC_028853_p73 hypothetical protein phrog_38551 unknown function unknown function 1 48237 48431
YP_009203368.1 NC_028853_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 509 1729
YP_009203419.1 NC_028853_p53 transposase phrog_157 transposase integration and excision -1 38659 39699
YP_009203422.1 NC_028853_p56 CI repressor phrog_4 transcriptional repressor transcription regulation -1 40730 41389
YP_009203410.1 NC_028853_p44 hypothetical protein phrog_16197 unknown function unknown function -1 33569 34519
YP_009203375.1 NC_028853_p9 hypothetical protein phrog_786 unknown function unknown function 1 7039 7416
YP_009203444.1 NC_028853_p78 hypothetical protein phrog_26315 unknown function unknown function -1 49700 49885
YP_009203395.1 NC_028853_p29 hypothetical protein phrog_24735 unknown function unknown function 1 24702 25301
YP_009203417.1 NC_028853_p51 plasmid maintenance system killer HigB phrog_3066 toxin of TA system moron, auxiliary metabolic gene and host takeover 1 37932 38207
YP_009203424.1 NC_028853_p58 CII protein phrog_725 CII-like regulator transcription regulation 1 41746 42006
YP_009203404.1 NC_028853_p38 hypothetical protein phrog_1992 MazG-like pyrophosphatase other -1 30187 30651
YP_009203429.1 NC_028853_p63 hypothetical protein phrog_8506 unknown function unknown function 1 45167 45382
YP_009203390.1 NC_028853_p24 minor tail protein K phrog_30 minor tail protein tail 1 15894 16625
YP_009203418.1 NC_028853_p52 plasmid maintenance system killer HigA phrog_1381 plasmid antitoxin with HTH domain moron, auxiliary metabolic gene and host takeover 1 38216 38521