Genomic map of Paenibacillus phage Sitara (NC_028854)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028854
Definition
Bacteriophage Sitara, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Sitaravirus.
DB of origin
REFSEQ
Length
43724
Host Name
Paenibacillus larvae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
74
%GC
41.59
Number of singletons
3
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009203478.1 NC_028854_p33 transposase-like protein phrog_157 transposase integration and excision -1 20945 21634
YP_009203485.1 NC_028854_p40 DNA binding protein phrog_1468 transcriptional repressor transcription regulation 1 25488 25685
YP_009203469.1 NC_028854_p24 hypothetical protein phrog_14782 unknown function unknown function 1 15735 15845
YP_009203459.1 NC_028854_p14 tail tape measure phrog_58 tail length tape measure protein tail 1 7795 10431
YP_009203448.1 NC_028854_p3 portal protein phrog_12 portal protein head and packaging 1 2084 3319
YP_009203499.1 NC_028854_p54 beta-lactamase-like hydrolase phrog_392 metal-dependent hydrolase other 1 32644 33402
YP_009203460.1 NC_028854_p15 tail protein phrog_33 distal tail protein Dit tail 1 10428 11279
YP_009203518.1 NC_028854_p73 transglycosylase-like protein phrog_1315 unknown function unknown function 1 43069 43335
YP_009203467.1 NC_028854_p22 holin-like protein phrog_1299 holin lysis 1 14886 15128
YP_009203492.1 NC_028854_p47 DNA binding antirepressor-like protein phrog_130 anti-repressor Ant transcription regulation 1 28240 28998
YP_009203516.1 NC_028854_p71 DNA methyltransferase phrog_67 DNA methyltransferase other 1 41661 42383
YP_009203446.1 NC_028854_p1 terminase small subunit phrog_361 terminase small subunit head and packaging 1 50 364
YP_009203510.1 NC_028854_p65 hypothetical protein phrog_5494 unknown function unknown function 1 38930 39400
YP_009203496.1 NC_028854_p51 ATPase phrog_1499 unknown function unknown function 1 29991 31520
YP_009203498.1 NC_028854_p53 RecT-like protein phrog_2780 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 31717 32631
YP_009203476.1 NC_028854_p31 hypothetical protein phrog_8263 unknown function unknown function -1 19703 20251
YP_009203487.1 NC_028854_p42 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 26451 26690
YP_009203506.1 NC_028854_p61 MazG-like nucleotide pyrophosphohydrolase phrog_715 MazG-like pyrophosphatase other 1 37214 37519
YP_009203501.1 NC_028854_p56 primosome component-like protein phrog_2514 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 33728 34558
YP_009203472.1 NC_028854_p27 hypothetical protein phrog_17971 unknown function unknown function 1 17240 17380
YP_009203509.1 NC_028854_p64 RuvC-like resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 38214 38771
YP_009203475.1 NC_028854_p30 hypothetical protein phrog_3374 unknown function unknown function -1 19498 19701
YP_009203454.1 NC_028854_p9 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 5873 6301
YP_009203466.1 NC_028854_p21 N-acetylmuramoyl-L-alanine amidase-like protein phrog_3088 amidase lysis 1 14205 14876
YP_009203503.1 NC_028854_p58 hypothetical protein phrog_6868 unknown function unknown function 1 35849 36154
YP_009203519.1 NC_028854_p74 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43332 43670
YP_009203505.1 NC_028854_p60 hypothetical protein phrog_1008 DNA methyltransferase other 1 36349 37053
YP_009203470.1 NC_028854_p25 peptidase-like protein phrog_15561 peptidase other 1 15842 16549
YP_009203490.1 NC_028854_p45 hypothetical protein phrog_12380 unknown function unknown function 1 27717 27944
YP_009203481.1 NC_028854_p36 DNA binding anti-repressor phrog_17477 anti-repressor transcription regulation 1 22405 22848
YP_009203458.1 NC_028854_p13 hypothetical protein phrog_7848 unknown function unknown function 1 7481 7735
YP_009203515.1 NC_028854_p70 hypothetical protein singleton unknown function unknown function 1 41338 41463
YP_009203451.1 NC_028854_p6 hypothetical protein phrog_6793 unknown function unknown function 1 5130 5303
YP_009203447.1 NC_028854_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 345 2069
YP_009203449.1 NC_028854_p4 Clp protease-like protein phrog_94 head maturation protease head and packaging 1 3309 4025
YP_009203512.1 NC_028854_p67 hypothetical protein phrog_1454 unknown function unknown function 1 40081 40284
YP_009203514.1 NC_028854_p69 HicA-like protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 40809 41024
YP_009203507.1 NC_028854_p62 hypothetical protein phrog_98 unknown function unknown function 1 37626 38009
YP_009203482.1 NC_028854_p37 integrase phrog_1 integrase integration and excision -1 23160 24383
YP_009203497.1 NC_028854_p52 hypothetical protein phrog_5189 unknown function unknown function 1 31517 31714
YP_009203508.1 NC_028854_p63 hypothetical protein phrog_6998 unknown function unknown function 1 38002 38217
YP_009203457.1 NC_028854_p12 hypothetical protein phrog_7902 unknown function unknown function 1 7116 7454
YP_009203479.1 NC_028854_p34 transposase-like protein phrog_151 transposase integration and excision -1 21640 21921
YP_009203461.1 NC_028854_p16 hypothetical protein phrog_538 minor tail protein tail 1 11282 12400
YP_009203473.1 NC_028854_p28 transposase-like protein phrog_157 transposase integration and excision -1 17439 18158
YP_009203474.1 NC_028854_p29 transposase phrog_151 transposase integration and excision -1 18329 19012
YP_009203450.1 NC_028854_p5 major capsid protein phrog_10 major head protein head and packaging 1 4022 5152
YP_009203504.1 NC_028854_p59 DNA-cytosine methyltransferase phrog_363 DNA methyltransferase other 1 36165 37217
YP_009203456.1 NC_028854_p11 major tail protein phrog_1407 major tail protein tail 1 6682 7119
YP_009203491.1 NC_028854_p46 hypothetical protein phrog_9497 unknown function unknown function 1 27950 28213
YP_009203495.1 NC_028854_p50 hypothetical protein phrog_8288 unknown function unknown function 1 29717 30007
YP_009203471.1 NC_028854_p26 hypothetical protein phrog_15378 unknown function unknown function 1 16585 17109
YP_009203484.1 NC_028854_p39 hypothetical protein singleton unknown function unknown function -1 25312 25440
YP_009203517.1 NC_028854_p72 hypothetical protein singleton unknown function unknown function 1 42563 42721
YP_009203483.1 NC_028854_p38 transcriptional regulator phrog_18248 transcriptional regulator transcription regulation -1 24430 25224
YP_009203493.1 NC_028854_p48 hypothetical protein phrog_12825 unknown function unknown function 1 28995 29474
YP_009203455.1 NC_028854_p10 tail protein phrog_176 tail terminator connector 1 6285 6680
YP_009203511.1 NC_028854_p66 ArpU-like transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 39452 39895
YP_009203480.1 NC_028854_p35 hypothetical protein phrog_29762 unknown function unknown function 1 22166 22318
YP_009203452.1 NC_028854_p7 head-tail connector phrog_40 head-tail adaptor Ad1 connector 1 5296 5559
YP_009203488.1 NC_028854_p43 DNA binding antirepressor phrog_373 anti-repressor transcription regulation 1 26687 27427
YP_009203453.1 NC_028854_p8 head-tail adaptor phrog_25 head closure Hc1 connector 1 5556 5873
YP_009203477.1 NC_028854_p32 YolD-like protein phrog_8703 unknown function unknown function 1 20493 20747
YP_009203494.1 NC_028854_p49 hypothetical protein phrog_8406 unknown function unknown function 1 29449 29712
YP_009203489.1 NC_028854_p44 hypothetical protein phrog_12765 unknown function unknown function 1 27454 27672
YP_009203465.1 NC_028854_p20 bacteriocin-like protein phrog_2429 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 13966 14205
YP_009203468.1 NC_028854_p23 hypothetical protein phrog_9393 unknown function unknown function 1 15262 15453
YP_009203464.1 NC_028854_p19 hypothetical protein phrog_134 unknown function unknown function 1 13824 13985
YP_009203486.1 NC_028854_p41 DNA binding antirepressor-like protein phrog_63 anti-repressor Ant transcription regulation 1 25682 26422
YP_009203513.1 NC_028854_p68 HicB-like protein phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover -1 40325 40747
YP_009203462.1 NC_028854_p17 tail protein phrog_5339 virion structural protein head and packaging 1 12406 13479
YP_009203500.1 NC_028854_p55 hypothetical protein phrog_7503 unknown function unknown function 1 33399 33713
YP_009203502.1 NC_028854_p57 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 34518 35846
YP_009203463.1 NC_028854_p18 hypothetical protein phrog_6220 unknown function unknown function 1 13489 13827