Genomic map of Bacillus phage Stahl (NC_028856)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028856
Definition
Bacillus phage Stahl, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Slashvirus.
DB of origin
REFSEQ
Length
80148
Host Name
Bacillus megaterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
110
%GC
35.25
Number of singletons
4
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009203637.1 NC_028856_p33 hypothetical protein phrog_2739 portal protein head and packaging 1 14401 15753
YP_009203633.1 NC_028856_p29 hypothetical protein phrog_7339 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 10026 10799
YP_009203605.1 NC_028856_p1 hypothetical protein phrog_7307 unknown function unknown function 1 486 638
YP_009203668.1 NC_028856_p64 hypothetical protein phrog_20066 unknown function unknown function -1 45833 46228
YP_009203663.1 NC_028856_p59 holin phrog_263 holin lysis 1 43473 43733
YP_009203657.1 NC_028856_p53 tape measure protein phrog_14917 tail length tape measure protein tail 1 28479 35228
YP_009203615.1 NC_028856_p11 hypothetical protein phrog_20290 lipoprotein other 1 3206 3388
YP_009203702.1 NC_028856_p98 RNA polymerase sigma factor phrog_21612 RNA polymerase sigma factor transcription regulation -1 69149 70999
YP_009203617.1 NC_028856_p13 hypothetical protein phrog_31900 unknown function unknown function 1 3710 4012
YP_009203618.1 NC_028856_p14 hypothetical protein phrog_19518 unknown function unknown function 1 4049 4288
YP_009203620.1 NC_028856_p16 hypothetical protein phrog_19251 unknown function unknown function 1 4483 5217
YP_009203631.1 NC_028856_p27 transcription factor phrog_16084 transcriptional regulator transcription regulation 1 9027 9647
YP_009203640.1 NC_028856_p36 hypothetical protein phrog_16565 unknown function unknown function 1 17242 18180
YP_009203611.1 NC_028856_p7 hypothetical protein phrog_19827 unknown function unknown function 1 1974 2351
YP_009203676.1 NC_028856_p72 hypothetical protein phrog_20927 unknown function unknown function -1 49667 49993
YP_009203646.1 NC_028856_p42 hypothetical protein phrog_11740 unknown function unknown function 1 20399 20830
YP_009203711.1 NC_028856_p107 hypothetical protein phrog_4655 unknown function unknown function -1 76994 77305
YP_009203712.1 NC_028856_p108 hypothetical protein phrog_4874 unknown function unknown function -1 77395 77700
YP_009203645.1 NC_028856_p41 hypothetical protein phrog_10590 unknown function unknown function 1 19865 20383
YP_009203680.1 NC_028856_p76 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 51957 53327
YP_009203658.1 NC_028856_p54 hypothetical protein phrog_15158 unknown function unknown function 1 35228 35593
YP_009203609.1 NC_028856_p5 hypothetical protein phrog_25197 unknown function unknown function 1 1445 1801
YP_009203630.1 NC_028856_p26 dUTPase phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 8433 8915
YP_009203641.1 NC_028856_p37 hypothetical protein phrog_15541 unknown function unknown function 1 18234 18626
YP_009203683.1 NC_028856_p79 hypothetical protein phrog_8252 unknown function unknown function -1 54050 54400
YP_009203673.1 NC_028856_p69 hypothetical protein phrog_21638 unknown function unknown function -1 48862 49110
YP_009203685.1 NC_028856_p81 nucleoside triphosphate hydrolase phrog_170 PhoH-like phosphate starvation-inducible other -1 54924 55700
YP_009203677.1 NC_028856_p73 hypothetical protein phrog_18922 unknown function unknown function -1 50069 50254
YP_009203703.1 NC_028856_p99 hypothetical protein phrog_21879 unknown function unknown function -1 71028 71399
YP_009203666.1 NC_028856_p62 holliday junction resolvase phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 44560 45057
YP_009203628.1 NC_028856_p24 hypothetical protein phrog_21477 unknown function unknown function 1 7539 7736
YP_009203671.1 NC_028856_p67 RNA polymerase sigma factor phrog_351 RNA polymerase sigma factor transcription regulation -1 47318 48019
YP_009203669.1 NC_028856_p65 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 46250 47167
YP_009203662.1 NC_028856_p58 peptidase phrog_2649 endolysin lysis 1 42275 43453
YP_009203652.1 NC_028856_p48 hypothetical protein phrog_16455 unknown function unknown function 1 26396 26854
YP_009203642.1 NC_028856_p38 hypothetical protein phrog_16258 unknown function unknown function 1 18629 18982
YP_009203689.1 NC_028856_p85 hypothetical protein phrog_15943 unknown function unknown function -1 57897 58898
YP_009203708.1 NC_028856_p104 hypothetical protein phrog_19413 unknown function unknown function 1 74670 75116
YP_009203710.1 NC_028856_p106 hypothetical protein singleton unknown function unknown function -1 76630 76908
YP_009203629.1 NC_028856_p25 RNA polymerase sigma factor phrog_1740 RNA polymerase sigma factor transcription regulation 1 7717 8436
YP_009203679.1 NC_028856_p75 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 51286 51954
YP_009203625.1 NC_028856_p21 hypothetical protein phrog_35610 unknown function unknown function 1 6267 6392
YP_009203653.1 NC_028856_p49 hypothetical protein phrog_17856 unknown function unknown function 1 26869 27045
YP_009203690.1 NC_028856_p86 hypothetical protein phrog_5068 unknown function unknown function -1 59011 59280
YP_009203639.1 NC_028856_p35 hypothetical protein phrog_16058 unknown function unknown function 1 16811 17224
YP_009203674.1 NC_028856_p70 hypothetical protein phrog_27393 unknown function unknown function -1 49166 49357
YP_009203655.1 NC_028856_p51 hypothetical protein phrog_16108 tail length tape measure protein tail 1 27529 28005
YP_009203704.1 NC_028856_p100 hypothetical protein phrog_20781 unknown function unknown function -1 71403 71633
YP_009203659.1 NC_028856_p55 tail fiber phrog_18983 tail fiber protein tail 1 35597 41509
YP_009203670.1 NC_028856_p66 hypothetical protein phrog_20975 unknown function unknown function -1 47172 47321
YP_009203688.1 NC_028856_p84 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 56857 57849
YP_009203686.1 NC_028856_p82 exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 55718 56320
YP_009203619.1 NC_028856_p15 hypothetical protein singleton unknown function unknown function 1 4288 4467
YP_009203682.1 NC_028856_p78 hypothetical protein phrog_21792 unknown function unknown function -1 53851 54057
YP_009203665.1 NC_028856_p61 hypothetical protein phrog_16935 unknown function unknown function -1 44331 44498
YP_009203698.1 NC_028856_p94 hypothetical protein phrog_16518 unknown function unknown function 1 64665 64805
YP_009203706.1 NC_028856_p102 secreted LysM/SCP-PR1 domain protein phrog_16914 sporulation protein moron, auxiliary metabolic gene and host takeover 1 72852 73454
YP_009203614.1 NC_028856_p10 hypothetical protein phrog_3458 unknown function unknown function 1 3012 3209
YP_009203607.1 NC_028856_p3 hypothetical protein phrog_19580 unknown function unknown function 1 896 1360
YP_009203616.1 NC_028856_p12 hypothetical protein phrog_21663 unknown function unknown function 1 3510 3710
YP_009203656.1 NC_028856_p52 hypothetical protein phrog_16037 tail length tape measure protein tail 1 28002 28463
YP_009203648.1 NC_028856_p44 hypothetical protein phrog_12586 unknown function unknown function 1 23522 23704
YP_009203661.1 NC_028856_p57 hypothetical protein phrog_1625 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 41813 42259
YP_009203693.1 NC_028856_p89 hypothetical protein phrog_14761 unknown function unknown function -1 62731 63114
YP_009203714.1 NC_028856_p110 hypothetical protein phrog_20801 unknown function unknown function -1 78706 78933
YP_009203632.1 NC_028856_p28 hypothetical protein phrog_15855 unknown function unknown function 1 9752 10024
YP_009203705.1 NC_028856_p101 antirepressor phrog_63 anti-repressor Ant transcription regulation 1 72023 72766
YP_009203606.1 NC_028856_p2 hypothetical protein phrog_6214 unknown function unknown function 1 656 820
YP_009203660.1 NC_028856_p56 hypothetical protein phrog_3323 unknown function unknown function 1 41623 41799
YP_009203623.1 NC_028856_p19 hypothetical protein phrog_9357 unknown function unknown function 1 5828 6010
YP_009203664.1 NC_028856_p60 hypothetical protein phrog_21606 unknown function unknown function -1 43763 44308
YP_009203626.1 NC_028856_p22 hypothetical protein phrog_15095 unknown function unknown function 1 6486 7190
YP_009203608.1 NC_028856_p4 hypothetical protein phrog_27276 unknown function unknown function 1 1360 1440
YP_009203687.1 NC_028856_p83 hypothetical protein phrog_6081 unknown function unknown function -1 56334 56828
YP_009203681.1 NC_028856_p77 nucleoside triphosphate hydrolase phrog_1815 guanylate kinase other -1 53334 53879
YP_009203695.1 NC_028856_p91 hypothetical protein phrog_21197 unknown function unknown function 1 63577 63843
YP_009203613.1 NC_028856_p9 hypothetical protein phrog_30987 unknown function unknown function 1 2779 3015
YP_009203694.1 NC_028856_p90 hypothetical protein phrog_19768 unknown function unknown function -1 63159 63347
YP_009203622.1 NC_028856_p18 hypothetical protein phrog_19573 unknown function unknown function 1 5546 5731
YP_009203667.1 NC_028856_p63 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 45038 45754
YP_009203678.1 NC_028856_p74 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 50257 51285
YP_009203672.1 NC_028856_p68 nuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 48137 48862
YP_009203635.1 NC_028856_p31 hypothetical protein phrog_16146 unknown function unknown function 1 11816 12685
YP_009203684.1 NC_028856_p80 hypothetical protein phrog_14790 unknown function unknown function -1 54417 54857
YP_009203634.1 NC_028856_p30 secreted N-acetylmuramyl-L-alanine amidase phrog_14642 endolysin lysis 1 11054 11680
YP_009203650.1 NC_028856_p46 tail protein singleton unknown function unknown function 1 23798 25579
YP_009203654.1 NC_028856_p50 hypothetical protein phrog_16225 unknown function unknown function 1 27090 27536
YP_009203649.1 NC_028856_p45 hypothetical protein singleton unknown function unknown function 1 23715 23801
YP_009203643.1 NC_028856_p39 hypothetical protein phrog_15871 unknown function unknown function 1 18982 19152
YP_009203696.1 NC_028856_p92 hypothetical protein phrog_21171 unknown function unknown function 1 64091 64195
YP_009203624.1 NC_028856_p20 hypothetical protein phrog_14252 unknown function unknown function 1 6010 6210
YP_009203644.1 NC_028856_p40 hypothetical protein phrog_15602 unknown function unknown function 1 19164 19670
YP_009203627.1 NC_028856_p23 hypothetical protein phrog_21642 unknown function unknown function 1 7193 7549
YP_009203651.1 NC_028856_p47 hypothetical protein phrog_16476 unknown function unknown function 1 25601 26308
YP_009203638.1 NC_028856_p34 hypothetical protein phrog_16389 unknown function unknown function 1 15773 16792
YP_009203701.1 NC_028856_p97 integrase/recombinase phrog_1 integrase integration and excision -1 68074 68985
YP_009203697.1 NC_028856_p93 hypothetical protein phrog_13699 membrane protein moron, auxiliary metabolic gene and host takeover 1 64192 64662
YP_009203699.1 NC_028856_p95 hypothetical protein phrog_5156 unknown function unknown function 1 64802 67294
YP_009203647.1 NC_028856_p43 hypothetical protein phrog_20626 unknown function unknown function 1 20860 23508
YP_009203675.1 NC_028856_p71 hypothetical protein phrog_6884 unknown function unknown function -1 49344 49667
YP_009203713.1 NC_028856_p109 hypothetical protein phrog_586 unknown function unknown function -1 78086 78496
YP_009203700.1 NC_028856_p96 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 67439 68011
YP_009203612.1 NC_028856_p8 hypothetical protein phrog_9662 unknown function unknown function 1 2344 2697
YP_009203636.1 NC_028856_p32 terminase large subunit phrog_2 terminase large subunit head and packaging 1 12690 14336
YP_009203709.1 NC_028856_p105 hypothetical protein phrog_19941 unknown function unknown function -1 75917 76543
YP_009203691.1 NC_028856_p87 ribonucleotide reductase alpha subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 59298 60332
YP_009203707.1 NC_028856_p103 HNH homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 73617 74123
YP_009203692.1 NC_028856_p88 ribonucleotide reductase large subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 60386 62719
YP_009203610.1 NC_028856_p6 hypothetical protein phrog_20689 unknown function unknown function 1 1798 1977
YP_009203621.1 NC_028856_p17 hypothetical protein phrog_20367 unknown function unknown function 1 5217 5462