Genomic map of Escherichia phage HY02 (NC_028872)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028872
Definition
Escherichia phage HY02, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Felixounavirus.
DB of origin
REFSEQ
Length
86252
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
125
%GC
38.92
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009204974.1 NC_028872_p71 hypothetical protein phrog_11 baseplate spike tail 1 46216 46839
YP_009204973.1 NC_028872_p70 hypothetical protein phrog_196 baseplate hub tail 1 45239 46216
YP_009204970.1 NC_028872_p67 tail length tape-measure protein phrog_4036 tail length tape measure protein tail 1 41867 44101
YP_009204940.1 NC_028872_p37 hypothetical protein phrog_4266 unknown function unknown function -1 19632 20030
YP_009204934.1 NC_028872_p31 hypothetical protein phrog_4343 unknown function unknown function -1 17231 17734
YP_009204952.1 NC_028872_p49 hypothetical protein phrog_2143 unknown function unknown function 1 28248 28805
YP_009204969.1 NC_028872_p66 hypothetical protein phrog_4963 tail assembly chaperone tail 1 41628 41867
YP_009204923.1 NC_028872_p20 hypothetical protein phrog_4327 unknown function unknown function 1 10686 11090
YP_009204961.1 NC_028872_p58 major capsid protein phrog_29 major head protein head and packaging 1 36307 37413
YP_009205014.1 NC_028872_p111 hypothetical protein phrog_2652 unknown function unknown function 1 76086 76427
YP_009205005.1 NC_028872_p102 hypothetical protein phrog_3877 unknown function unknown function 1 69272 70129
YP_009204917.1 NC_028872_p14 hypothetical protein phrog_4495 unknown function unknown function 1 8543 8923
YP_009204933.1 NC_028872_p30 hypothetical protein phrog_4457 unknown function unknown function -1 16930 17154
YP_009204927.1 NC_028872_p24 hypothetical protein phrog_4318 unknown function unknown function 1 12419 12760
YP_009204951.1 NC_028872_p48 hypothetical protein singleton unknown function unknown function 1 27910 28059
YP_009204962.1 NC_028872_p59 hypothetical protein phrog_1732 unknown function unknown function 1 37435 37884
YP_009204977.1 NC_028872_p74 hypothetical protein phrog_4017 baseplate protein tail 1 48730 49584
YP_009205001.1 NC_028872_p98 hypothetical protein phrog_4469 unknown function unknown function 1 66619 66819
YP_009204942.1 NC_028872_p39 tail protein phrog_3995 tail protein tail -1 20546 21679
YP_009204913.1 NC_028872_p10 hypothetical protein phrog_4453 unknown function unknown function 1 6509 6835
YP_009204909.1 NC_028872_p6 hypothetical protein phrog_1152 Rz-like spanin lysis 1 5432 5779
YP_009205002.1 NC_028872_p99 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 66812 68797
YP_009204905.1 NC_028872_p2 rIIB phrog_609 RIIB lysis inhibitor lysis 1 2472 3581
YP_009205025.1 NC_028872_p122 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other 1 82994 83875
YP_009204975.1 NC_028872_p72 hypothetical protein phrog_120 baseplate wedge subunit tail 1 46839 47258
YP_009205009.1 NC_028872_p106 hypothetical protein phrog_4442 unknown function unknown function 1 72226 72456
YP_009204991.1 NC_028872_p88 hypothetical protein phrog_5926 unknown function unknown function -1 58068 58508
YP_009205003.1 NC_028872_p100 hypothetical protein phrog_4982 unknown function unknown function 1 68772 69053
YP_009204953.1 NC_028872_p50 hypothetical protein phrog_2114 unknown function unknown function 1 29257 29991
YP_009204986.1 NC_028872_p83 hypothetical protein phrog_4422 unknown function unknown function -1 56039 56554
YP_009204904.1 NC_028872_p1 rIIA phrog_612 RIIA lysis inhibitor lysis 1 26 2392
YP_009204993.1 NC_028872_p90 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 59493 60593
YP_009205022.1 NC_028872_p119 hypothetical protein phrog_4425 unknown function unknown function 1 81765 82031
YP_009204946.1 NC_028872_p43 hypothetical protein phrog_8138 unknown function unknown function -1 22896 23057
YP_009204910.1 NC_028872_p7 hypothetical protein phrog_4180 unknown function unknown function 1 5673 5942
YP_009205023.1 NC_028872_p120 hypothetical protein phrog_3500 unknown function unknown function 1 82196 82711
YP_009205018.1 NC_028872_p115 anaerobic nucleoside diphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 77987 80131
YP_009205010.1 NC_028872_p107 hypothetical protein phrog_2144 MazG-like pyrophosphatase other 1 72449 73204
YP_009204999.1 NC_028872_p96 minor tail protein phrog_4251 minor tail protein tail 1 64993 65805
YP_009204925.1 NC_028872_p22 hypothetical protein phrog_3303 unknown function unknown function 1 11487 12029
YP_009204941.1 NC_028872_p38 lysin phrog_7 endolysin lysis -1 20082 20546
YP_009204979.1 NC_028872_p76 tail fiber protein phrog_2097 tail fiber protein tail 1 49889 51064
YP_009204926.1 NC_028872_p23 hypothetical protein phrog_4640 unknown function unknown function 1 12096 12329
YP_009204930.1 NC_028872_p27 hypothetical protein phrog_4559 unknown function unknown function 1 13907 14155
YP_009204944.1 NC_028872_p41 hypothetical protein phrog_4034 unknown function unknown function -1 22097 22687
YP_009204916.1 NC_028872_p13 hypothetical protein phrog_335 phosphatase other 1 7237 8022
YP_009204965.1 NC_028872_p62 hypothetical protein phrog_4082 unknown function unknown function 1 38739 39338
YP_009205015.1 NC_028872_p112 ribonucleoside diphosphate beta chain phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 76424 77497
YP_009205000.1 NC_028872_p97 deoxynucleotide monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other 1 65867 66610
YP_009204937.1 NC_028872_p34 hypothetical protein phrog_4040 unknown function unknown function -1 18614 18958
YP_009204963.1 NC_028872_p60 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 37884 38366
YP_009204976.1 NC_028872_p73 baseplate component phrog_6 baseplate wedge subunit tail 1 47258 48727
YP_009204960.1 NC_028872_p57 structural protein phrog_4146 tail protease other 1 35896 36273
YP_009204998.1 NC_028872_p95 hypothetical protein phrog_4039 unknown function unknown function 1 64569 64991
YP_009204938.1 NC_028872_p35 hypothetical protein phrog_4385 unknown function unknown function -1 18951 19244
YP_009204948.1 NC_028872_p45 hypothetical protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism 1 23760 25175
YP_009204936.1 NC_028872_p33 hypothetical protein phrog_4109 unknown function unknown function -1 18033 18614
YP_009204968.1 NC_028872_p65 hypothetical protein phrog_1613 tail assembly chaperone tail 1 41227 41625
YP_009204947.1 NC_028872_p44 hypothetical protein phrog_4114 unknown function unknown function 1 23307 23678
YP_009204918.1 NC_028872_p15 hypothetical protein phrog_5089 unknown function unknown function 1 9012 9302
YP_009204957.1 NC_028872_p54 hypothetical protein phrog_3977 unknown function unknown function 1 33694 34194
YP_009204943.1 NC_028872_p40 hypothetical protein phrog_4463 unknown function unknown function -1 21676 22047
YP_009204985.1 NC_028872_p82 hypothetical protein phrog_2993 unknown function unknown function -1 55778 56038
YP_009205019.1 NC_028872_p116 hypothetical protein phrog_4382 unknown function unknown function 1 80483 80878
YP_009204906.1 NC_028872_p3 hypothetical protein phrog_600 unknown function unknown function 1 3682 4230
YP_009204907.1 NC_028872_p4 hypothetical protein phrog_3970 polynucleotide kinase other 1 4208 4903
YP_009204955.1 NC_028872_p52 terminase large subunit phrog_979 terminase large subunit head and packaging 1 30610 32211
YP_009205021.1 NC_028872_p118 anaerobic NTP reductase small subunit phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism 1 81184 81669
YP_009205004.1 NC_028872_p101 hypothetical protein phrog_4424 unknown function unknown function 1 69050 69199
YP_009204995.1 NC_028872_p92 hypothetical protein phrog_4230 unknown function unknown function -1 60806 61024
YP_009204945.1 NC_028872_p42 hypothetical protein phrog_5064 unknown function unknown function -1 22681 22914
YP_009204989.1 NC_028872_p86 hypothetical protein phrog_4473 unknown function unknown function -1 57221 57433
YP_009204997.1 NC_028872_p94 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 61613 64312
YP_009204959.1 NC_028872_p56 head maturation protease phrog_53 head maturation protease head and packaging 1 34538 35884
YP_009205011.1 NC_028872_p108 hypothetical protein phrog_4007 unknown function unknown function 1 73185 73508
YP_009204988.1 NC_028872_p85 transcriptional regulatory protein phrog_1373 transcriptional regulator transcription regulation -1 56929 57228
YP_009205020.1 NC_028872_p117 hypothetical protein phrog_1774 unknown function unknown function 1 80875 81174
YP_009204971.1 NC_028872_p68 hypothetical protein phrog_3721 unknown function unknown function 1 44101 44898
YP_009205026.1 NC_028872_p123 nicotinamide phosphoribosyl transferase phrog_448 nicotinamide phosphoribosyl transferase other 1 83921 85702
YP_009205008.1 NC_028872_p105 NAD synthetase phrog_447 NAD synthetase other 1 71704 72204
YP_009204919.1 NC_028872_p16 hypothetical protein phrog_12266 unknown function unknown function 1 9388 9600
YP_009205028.1 NC_028872_p125 hypothetical protein phrog_3931 unknown function unknown function 1 86073 86249
YP_009204972.1 NC_028872_p69 hypothetical protein phrog_349 virion structural protein head and packaging 1 44898 45239
YP_009204958.1 NC_028872_p55 hypothetical protein phrog_240 head protein head and packaging 1 34194 34526
YP_009204935.1 NC_028872_p32 hypothetical protein phrog_4459 unknown function unknown function -1 17731 17964
YP_009204982.1 NC_028872_p79 hypothetical protein phrog_4038 unknown function unknown function 1 53928 54299
YP_009204929.1 NC_028872_p26 hypothetical protein phrog_7022 unknown function unknown function 1 13578 13841
YP_009204981.1 NC_028872_p78 hypothetical protein phrog_402 unknown function unknown function 1 53734 53931
YP_009204950.1 NC_028872_p47 hypothetical protein phrog_21637 unknown function unknown function 1 26362 26541
YP_009204928.1 NC_028872_p25 hypothetical protein phrog_4725 unknown function unknown function 1 12981 13511
YP_009204978.1 NC_028872_p75 hypothetical protein phrog_4141 unknown function unknown function 1 49584 49886
YP_009204996.1 NC_028872_p93 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 61076 61609
YP_009204911.1 NC_028872_p8 hypothetical protein phrog_4391 unknown function unknown function 1 5939 6208
YP_009205013.1 NC_028872_p110 ribonucleoside triphosphate reductase alpha chain phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 73880 76114
YP_009204924.1 NC_028872_p21 hypothetical protein phrog_3623 unknown function unknown function 1 11198 11401
YP_009204922.1 NC_028872_p19 hypothetical protein phrog_3436 unknown function unknown function 1 10328 10600
YP_009204956.1 NC_028872_p53 hypothetical protein phrog_113 portal protein head and packaging 1 32228 33694
YP_009205007.1 NC_028872_p104 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 71216 71707
YP_009204984.1 NC_028872_p81 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 55236 55781
YP_009204932.1 NC_028872_p29 hypothetical protein phrog_4713 unknown function unknown function -1 16412 16876
YP_009204967.1 NC_028872_p64 hypothetical protein phrog_280 virion structural protein head and packaging 1 40707 41153
YP_009204915.1 NC_028872_p12 hypothetical protein phrog_2210 unknown function unknown function 1 7036 7236
YP_009205016.1 NC_028872_p113 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 77497 77739
YP_009204931.1 NC_028872_p28 hypothetical protein phrog_4330 unknown function unknown function -1 15850 16443
YP_009204914.1 NC_028872_p11 hypothetical protein phrog_6082 unknown function unknown function 1 6810 7043
YP_009205006.1 NC_028872_p103 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 70192 71238
YP_009204990.1 NC_028872_p87 hypothetical protein phrog_4332 unknown function unknown function -1 57435 57818
YP_009204954.1 NC_028872_p51 hypothetical protein phrog_4397 unknown function unknown function 1 30388 30588
YP_009204992.1 NC_028872_p89 hypothetical protein phrog_4652 unknown function unknown function -1 58511 59098
YP_009204994.1 NC_028872_p91 hypothetical protein phrog_4427 unknown function unknown function -1 60590 60796
YP_009204912.1 NC_028872_p9 hypothetical protein phrog_3849 unknown function unknown function 1 6205 6519
YP_009204949.1 NC_028872_p46 hypothetical protein phrog_36255 unknown function unknown function -1 25420 25635
YP_009204987.1 NC_028872_p84 hypothetical protein phrog_4116 unknown function unknown function -1 56568 56927
YP_009205017.1 NC_028872_p114 hypothetical protein phrog_4532 unknown function unknown function 1 77732 77938
YP_009205012.1 NC_028872_p109 hypothetical protein phrog_3358 unknown function unknown function 1 73501 73833
YP_009205027.1 NC_028872_p124 hypothetical protein phrog_4262 unknown function unknown function 1 85756 86091
YP_009204980.1 NC_028872_p77 tail fiber protein phrog_4277 tail fiber protein tail 1 51111 53654
YP_009204964.1 NC_028872_p61 hypothetical protein phrog_2874 unknown function unknown function 1 38363 38764
YP_009204939.1 NC_028872_p36 hypothetical protein phrog_4348 unknown function unknown function -1 19244 19639
YP_009204908.1 NC_028872_p5 hypothetical protein phrog_2267 unknown function unknown function 1 4900 5379
YP_009204920.1 NC_028872_p17 hypothetical protein phrog_4401 unknown function unknown function 1 9616 9912
YP_009204921.1 NC_028872_p18 hypothetical protein phrog_4375 unknown function unknown function 1 9906 10238
YP_009204983.1 NC_028872_p80 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 54335 55234
YP_009204966.1 NC_028872_p63 structural protein phrog_205 tail sheath tail 1 39339 40691
YP_009205024.1 NC_028872_p121 hypothetical protein phrog_4726 unknown function unknown function 1 82704 82982