Genomic map of Pseudomonas phage vB_PaeM_PS24 (NC_028882)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028882
Definition
Pseudomonas phage vB_PaeM_PS24, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Nankokuvirus; Pseudomonas virus PS24.
DB of origin
REFSEQ
Length
84583
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
153
%GC
54.7
Number of singletons
3
Number of paralogs
9

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009206104.1 NC_028882_p139 hypothetical protein phrog_12054 unknown function unknown function 1 78757 79035
YP_009206022.1 NC_028882_p57 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 32156 32623
YP_009206118.1 NC_028882_p153 hypothetical protein phrog_4686 unknown function unknown function 1 84090 84254
YP_009206092.1 NC_028882_p127 hypothetical protein phrog_11927 unknown function unknown function 1 74356 74568
YP_009206024.1 NC_028882_p59 hypothetical protein phrog_4087 unknown function unknown function 1 32994 33614
YP_009205984.1 NC_028882_p19 hypothetical protein phrog_7635 unknown function unknown function 1 10175 10432
YP_009206007.1 NC_028882_p42 hypothetical protein phrog_3948 unknown function unknown function -1 20876 21142
YP_009206107.1 NC_028882_p142 hypothetical protein phrog_15160 unknown function unknown function 1 80037 80504
YP_009206012.1 NC_028882_p47 hypothetical protein phrog_11136 unknown function unknown function 1 23479 23781
YP_009206115.1 NC_028882_p150 hypothetical protein singleton unknown function unknown function 1 83201 83506
YP_009205991.1 NC_028882_p26 hypothetical protein singleton unknown function unknown function -1 12225 12536
YP_009206085.1 NC_028882_p120 hypothetical protein phrog_10949 unknown function unknown function 1 71663 71905
YP_009206110.1 NC_028882_p145 hypothetical protein phrog_32070 unknown function unknown function 1 81527 81985
YP_009206032.1 NC_028882_p67 hypothetical protein phrog_817 tail fiber protein tail 1 39495 40262
YP_009205974.1 NC_028882_p9 hypothetical protein phrog_10655 unknown function unknown function 1 4738 5106
YP_009205986.1 NC_028882_p21 hypothetical protein phrog_20444 unknown function unknown function 1 10562 10930
YP_009206060.1 NC_028882_p95 hypothetical protein phrog_11998 unknown function unknown function 1 55012 55278
YP_009206005.1 NC_028882_p40 hypothetical protein phrog_5276 unknown function unknown function -1 19741 20013
YP_009205989.1 NC_028882_p24 hypothetical protein phrog_10165 unknown function unknown function -1 11774 12052
YP_009206073.1 NC_028882_p108 hypothetical protein phrog_12267 unknown function unknown function 1 64246 64461
YP_009206006.1 NC_028882_p41 tRNA-specific adenosine deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 20016 20867
YP_009205997.1 NC_028882_p32 hypothetical protein phrog_12439 unknown function unknown function -1 14169 14447
YP_009206083.1 NC_028882_p118 hypothetical protein phrog_12627 unknown function unknown function 1 71175 71438
YP_009206088.1 NC_028882_p123 hypothetical protein phrog_12479 unknown function unknown function 1 72675 72995
YP_009205977.1 NC_028882_p12 hypothetical protein phrog_9984 unknown function unknown function 1 5936 6325
YP_009206028.1 NC_028882_p63 hypothetical protein phrog_280 virion structural protein head and packaging 1 36027 36530
YP_009206090.1 NC_028882_p125 hypothetical protein phrog_11943 unknown function unknown function 1 73215 73709
YP_009205987.1 NC_028882_p22 hypothetical protein phrog_18236 unknown function unknown function 1 10938 11201
YP_009206033.1 NC_028882_p68 hypothetical protein phrog_349 virion structural protein head and packaging 1 40262 40627
YP_009206016.1 NC_028882_p51 hypothetical protein phrog_113 portal protein head and packaging 1 27397 28884
YP_009206026.1 NC_028882_p61 hypothetical protein phrog_280 virion structural protein head and packaging 1 34950 35471
YP_009206027.1 NC_028882_p62 hypothetical protein phrog_280 virion structural protein head and packaging 1 35524 36027
YP_009206095.1 NC_028882_p130 hypothetical protein phrog_13123 unknown function unknown function 1 75655 75858
YP_009206100.1 NC_028882_p135 hypothetical protein phrog_13320 unknown function unknown function 1 77656 77790
YP_009206068.1 NC_028882_p103 hypothetical protein phrog_7029 unknown function unknown function 1 62013 62279
YP_009206075.1 NC_028882_p110 hypothetical protein phrog_12364 unknown function unknown function 1 65442 65666
YP_009205993.1 NC_028882_p28 hypothetical protein phrog_10306 unknown function unknown function -1 13025 13360
YP_009206044.1 NC_028882_p79 hypothetical protein phrog_4172 unknown function unknown function 1 48257 48556
YP_009205970.1 NC_028882_p5 hypothetical protein phrog_2176 unknown function unknown function 1 2458 2799
YP_009206058.1 NC_028882_p93 hypothetical protein phrog_13021 unknown function unknown function 1 54094 54489
YP_009206112.1 NC_028882_p147 hypothetical protein phrog_38746 unknown function unknown function 1 82296 82469
YP_009206114.1 NC_028882_p149 hypothetical protein phrog_36638 unknown function unknown function 1 82951 83181
YP_009206025.1 NC_028882_p60 hypothetical protein phrog_205 tail sheath tail 1 33617 34939
YP_009206099.1 NC_028882_p134 hypothetical protein phrog_12996 unknown function unknown function 1 77442 77555
YP_009206116.1 NC_028882_p151 hypothetical protein singleton unknown function unknown function 1 83503 83766
YP_009206078.1 NC_028882_p113 hypothetical protein phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 66983 67357
YP_009205995.1 NC_028882_p30 hypothetical protein phrog_11756 unknown function unknown function -1 13776 13982
YP_009206014.1 NC_028882_p49 hypothetical protein phrog_1954 virion structural protein head and packaging 1 25555 25869
YP_009206064.1 NC_028882_p99 hypothetical protein phrog_12310 unknown function unknown function 1 60326 60511
YP_009205983.1 NC_028882_p18 hypothetical protein phrog_3230 unknown function unknown function 1 9591 10091
YP_009205992.1 NC_028882_p27 hypothetical protein phrog_10673 unknown function unknown function -1 12801 13028
YP_009206031.1 NC_028882_p66 hypothetical protein phrog_991 tail length tape measure protein tail 1 37162 39498
YP_009206065.1 NC_028882_p100 hypothetical protein phrog_2544 unknown function unknown function 1 60579 61472
YP_009206015.1 NC_028882_p50 terminase-like family protein phrog_979 terminase large subunit head and packaging 1 25968 27386
YP_009206089.1 NC_028882_p124 hypothetical protein phrog_12962 unknown function unknown function 1 72995 73162
YP_009206080.1 NC_028882_p115 hypothetical protein phrog_11821 unknown function unknown function 1 69216 69581
YP_009206056.1 NC_028882_p91 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 52638 53858
YP_009206011.1 NC_028882_p46 hypothetical protein phrog_13098 unknown function unknown function 1 23026 23274
YP_009206036.1 NC_028882_p71 hypothetical protein phrog_120 baseplate wedge subunit tail 1 42271 42636
YP_009205985.1 NC_028882_p20 hypothetical protein phrog_5604 unknown function unknown function 1 10416 10565
YP_009206049.1 NC_028882_p84 hypothetical protein phrog_16562 unknown function unknown function 1 50000 50221
YP_009206039.1 NC_028882_p74 hypothetical protein phrog_2282 tail fiber protein tail 1 44879 46882
YP_009206020.1 NC_028882_p55 hypothetical protein phrog_29 major head protein head and packaging 1 30584 31639
YP_009205998.1 NC_028882_p33 RecBCD enzyme subunit phrog_1967 DNA helicase DNA, RNA and nucleotide metabolism -1 14444 16006
YP_009206111.1 NC_028882_p146 hypothetical protein phrog_4310 unknown function unknown function 1 82051 82251
YP_009205978.1 NC_028882_p13 hypothetical protein phrog_3956 unknown function unknown function 1 6322 7581
YP_009205996.1 NC_028882_p31 hypothetical protein phrog_14060 unknown function unknown function -1 13991 14179
YP_009206013.1 NC_028882_p48 hypothetical protein phrog_15848 terminase large subunit head and packaging 1 24664 25482
YP_009206070.1 NC_028882_p105 hypothetical protein phrog_519 unknown function unknown function 1 63355 63516
YP_009206043.1 NC_028882_p78 hypothetical protein phrog_5388 Rz-like spanin lysis 1 48094 48276
YP_009206096.1 NC_028882_p131 hypothetical protein phrog_12189 unknown function unknown function 1 75934 76482
YP_009205980.1 NC_028882_p15 hypothetical protein phrog_3483 unknown function unknown function 1 7870 8385
YP_009206082.1 NC_028882_p117 hypothetical protein phrog_1106 unknown function unknown function 1 70703 71185
YP_009205979.1 NC_028882_p14 hypothetical protein phrog_8303 unknown function unknown function 1 7581 7826
YP_009206101.1 NC_028882_p136 hypothetical protein phrog_12567 unknown function unknown function 1 77775 78167
YP_009206004.1 NC_028882_p39 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 18457 19728
YP_009206081.1 NC_028882_p116 ribonucleoside-diphosphate reductase subunit beta phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 69623 70642
YP_009206077.1 NC_028882_p112 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 66080 66979
YP_009206038.1 NC_028882_p73 hypothetical protein phrog_587 structural protein head and packaging 1 44105 44869
YP_009206063.1 NC_028882_p98 hypothetical protein phrog_12101 unknown function unknown function 1 59973 60179
YP_009206108.1 NC_028882_p143 hypothetical protein phrog_6091 unknown function unknown function 1 80588 80833
YP_009205973.1 NC_028882_p8 hypothetical protein phrog_2176 unknown function unknown function 1 4048 4728
YP_009206001.1 NC_028882_p36 hypothetical protein phrog_11519 unknown function unknown function -1 17023 17271
YP_009205982.1 NC_028882_p17 hypothetical protein phrog_4029 unknown function unknown function 1 8891 9619
YP_009205971.1 NC_028882_p6 hypothetical protein phrog_3483 unknown function unknown function 1 2796 3698
YP_009206109.1 NC_028882_p144 hypothetical protein phrog_11104 unknown function unknown function 1 80910 81443
YP_009206009.1 NC_028882_p44 hypothetical protein phrog_12276 unknown function unknown function -1 21647 22189
YP_009206030.1 NC_028882_p65 hypothetical protein phrog_4625 unknown function unknown function 1 36951 37172
YP_009206023.1 NC_028882_p58 hypothetical protein phrog_939 head protein head and packaging 1 32623 32994
YP_009206051.1 NC_028882_p86 hypothetical protein phrog_4794 unknown function unknown function 1 50435 50701
YP_009206048.1 NC_028882_p83 hypothetical protein phrog_14224 unknown function unknown function 1 49758 49994
YP_009206086.1 NC_028882_p121 hypothetical protein phrog_11258 unknown function unknown function 1 71957 72511
YP_009206069.1 NC_028882_p104 hypothetical protein phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 62279 63367
YP_009206054.1 NC_028882_p89 hypothetical protein phrog_13454 unknown function unknown function 1 51976 52272
YP_009206084.1 NC_028882_p119 hypothetical protein phrog_2251 unknown function unknown function 1 71431 71661
YP_009205981.1 NC_028882_p16 hypothetical protein phrog_343 unknown function unknown function 1 8378 8707
YP_009206072.1 NC_028882_p107 hypothetical protein phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 63686 64249
YP_009206067.1 NC_028882_p102 hypothetical protein phrog_12381 unknown function unknown function 1 61726 62001
YP_009206019.1 NC_028882_p54 hypothetical protein phrog_49 head decoration head and packaging 1 30199 30573
YP_009206102.1 NC_028882_p137 hypothetical protein phrog_13058 unknown function unknown function 1 78256 78519
YP_009205976.1 NC_028882_p11 hypothetical protein phrog_7181 unknown function unknown function 1 5653 5841
YP_009205988.1 NC_028882_p23 hypothetical protein phrog_13737 unknown function unknown function -1 11469 11699
YP_009206047.1 NC_028882_p82 hypothetical protein phrog_12190 unknown function unknown function 1 49411 49620
YP_009206002.1 NC_028882_p37 spore cortex-lytic enzyme precursor phrog_938 endolysin lysis -1 17281 17844
YP_009206000.1 NC_028882_p35 hypothetical protein phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism -1 16424 17026
YP_009206079.1 NC_028882_p114 ribonucleoside-diphosphate reductase phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 67350 69206
YP_009206037.1 NC_028882_p72 hypothetical protein phrog_6 baseplate wedge subunit tail 1 42637 44103
YP_009206003.1 NC_028882_p38 hypothetical protein phrog_2686 unknown function unknown function -1 17897 18397
YP_009206055.1 NC_028882_p90 hypothetical protein phrog_9905 unknown function unknown function 1 52274 52645
YP_009206059.1 NC_028882_p94 hypothetical protein phrog_12927 unknown function unknown function 1 54476 55012
YP_009205990.1 NC_028882_p25 hypothetical protein phrog_10597 unknown function unknown function -1 12049 12228
YP_009206010.1 NC_028882_p45 hypothetical protein phrog_3900 unknown function unknown function 1 22668 23024
YP_009206045.1 NC_028882_p80 hypothetical protein phrog_3899 unknown function unknown function 1 48572 48859
YP_009206105.1 NC_028882_p140 hypothetical protein phrog_15314 unknown function unknown function 1 79150 79641
YP_009206057.1 NC_028882_p92 hypothetical protein phrog_13122 unknown function unknown function 1 53868 54053
YP_009206097.1 NC_028882_p132 hypothetical protein phrog_9396 unknown function unknown function 1 76563 76961
YP_009206103.1 NC_028882_p138 hypothetical protein phrog_4025 unknown function unknown function 1 78519 78755
YP_009206053.1 NC_028882_p88 SPFH domain / band 7 family protein phrog_200 lipoprotein other 1 51076 51927
YP_009206094.1 NC_028882_p129 hypothetical protein phrog_5289 unknown function unknown function 1 75362 75595
YP_009206117.1 NC_028882_p152 hypothetical protein phrog_11866 unknown function unknown function 1 83823 84041
YP_009205969.1 NC_028882_p4 hypothetical protein phrog_2176 unknown function unknown function 1 2115 2471
YP_009206021.1 NC_028882_p56 hypothetical protein phrog_1732 unknown function unknown function 1 31693 32178
YP_009205967.1 NC_028882_p2 hypothetical protein phrog_2176 unknown function unknown function 1 1411 1752
YP_009206008.1 NC_028882_p43 hypothetical protein phrog_11910 unknown function unknown function -1 21252 21650
YP_009206113.1 NC_028882_p148 hypothetical protein phrog_16815 unknown function unknown function 1 82725 82910
YP_009206071.1 NC_028882_p106 hypothetical protein phrog_12564 unknown function unknown function 1 63516 63689
YP_009205975.1 NC_028882_p10 hypothetical protein phrog_2614 unknown function unknown function 1 5310 5624
YP_009206029.1 NC_028882_p64 hypothetical protein phrog_1613 tail assembly chaperone tail 1 36544 36930
YP_009205999.1 NC_028882_p34 hypothetical protein phrog_3360 unknown function unknown function -1 15984 16469
YP_009206018.1 NC_028882_p53 hypothetical protein phrog_4103 unknown function unknown function 1 29295 30182
YP_009205994.1 NC_028882_p29 proteasome subunit beta phrog_1040 peptidase HslV family other -1 13351 13779
YP_009206093.1 NC_028882_p128 hypothetical protein phrog_5201 unknown function unknown function 1 75081 75350
YP_009206052.1 NC_028882_p87 hypothetical protein phrog_13586 unknown function unknown function 1 50698 51066
YP_009206040.1 NC_028882_p75 hypothetical protein phrog_2860 endolysin head and packaging 1 46884 47447
YP_009205972.1 NC_028882_p7 hypothetical protein phrog_2176 unknown function unknown function 1 3695 4048
YP_009206046.1 NC_028882_p81 hypothetical protein phrog_12496 unknown function unknown function 1 48968 49387
YP_009206042.1 NC_028882_p77 hypothetical protein phrog_4349 Rz-like spanin lysis 1 47691 48107
YP_009206066.1 NC_028882_p101 hypothetical protein phrog_7018 unknown function unknown function 1 61531 61725
YP_009205966.1 NC_028882_p1 hypothetical protein phrog_2176 unknown function unknown function 1 990 1421
YP_009206017.1 NC_028882_p52 hypothetical protein phrog_1530 DNA methyltransferase other 1 28886 29302
YP_009206034.1 NC_028882_p69 hypothetical protein phrog_196 baseplate hub tail 1 40628 41509
YP_009206091.1 NC_028882_p126 hypothetical protein phrog_12731 unknown function unknown function 1 73706 74185
YP_009206062.1 NC_028882_p97 DNA polymerase family A phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 57299 59956
YP_009206035.1 NC_028882_p70 hypothetical protein phrog_11 baseplate spike tail 1 41506 42264
YP_009206061.1 NC_028882_p96 hypothetical protein phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 55326 57278
YP_009206050.1 NC_028882_p85 hypothetical protein phrog_14175 unknown function unknown function 1 50224 50424
YP_009206074.1 NC_028882_p109 hypothetical protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 64471 65388
YP_009206041.1 NC_028882_p76 hypothetical protein phrog_12175 unknown function unknown function 1 47428 47694
YP_009206106.1 NC_028882_p141 hypothetical protein phrog_15407 unknown function unknown function 1 79652 80011
YP_009206098.1 NC_028882_p133 hypothetical protein phrog_12145 unknown function unknown function 1 77028 77417
YP_009206076.1 NC_028882_p111 hypothetical protein phrog_4521 unknown function unknown function 1 65663 66076
YP_009206087.1 NC_028882_p122 hypothetical protein phrog_7860 unknown function unknown function 1 72492 72665
YP_009205968.1 NC_028882_p3 hypothetical protein phrog_2176 unknown function unknown function 1 1742 2128