Genomic map of Pseudomonas phage DL64 (NC_028885)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028885
Definition
Pseudomonas phage DL64, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; unclassified Litunavirus.
DB of origin
REFSEQ
Length
72378
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
90
%GC
54.95
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009206223.1 NC_028885_p14 hypothetical protein phrog_6467 unknown function unknown function 1 13383 14948
YP_009206234.1 NC_028885_p25 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 29370 30104
YP_009206229.1 NC_028885_p20 hypothetical protein phrog_7564 unknown function unknown function -1 26791 27228
YP_009206218.1 NC_028885_p9 hypothetical protein phrog_1357 major head protein head and packaging 1 7766 8965
YP_009206239.1 NC_028885_p30 tail fiber protein phrog_496 tail fiber protein tail 1 34522 35835
YP_009206265.1 NC_028885_p56 hypothetical protein phrog_12464 unknown function unknown function -1 57632 57856
YP_009206267.1 NC_028885_p58 hypothetical protein phrog_8451 unknown function unknown function -1 58368 58949
YP_009206236.1 NC_028885_p27 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism -1 32336 33346
YP_009206247.1 NC_028885_p38 hypothetical protein phrog_8307 unknown function unknown function -1 42248 42439
YP_009206249.1 NC_028885_p40 hypothetical protein phrog_7722 unknown function unknown function -1 42890 43114
YP_009206297.1 NC_028885_p88 hypothetical protein phrog_10651 unknown function unknown function -1 71455 71715
YP_009206243.1 NC_028885_p34 hypothetical protein phrog_2687 unknown function unknown function 1 40366 40608
YP_009206284.1 NC_028885_p75 hypothetical protein phrog_8895 unknown function unknown function -1 66719 66940
YP_009206246.1 NC_028885_p37 hypothetical protein phrog_8796 unknown function unknown function -1 41701 42255
YP_009206291.1 NC_028885_p82 hypothetical protein phrog_3968 unknown function unknown function -1 68459 68689
YP_009206269.1 NC_028885_p60 hypothetical protein phrog_7111 unknown function unknown function -1 59500 60126
YP_009206221.1 NC_028885_p12 hypothetical protein phrog_2220 unknown function unknown function 1 10713 12935
YP_009206277.1 NC_028885_p68 hypothetical protein phrog_8585 unknown function unknown function -1 64081 64428
YP_009206219.1 NC_028885_p10 hypothetical protein phrog_2130 unknown function unknown function 1 9022 9687
YP_009206276.1 NC_028885_p67 RNA polymerase phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism -1 63137 64069
YP_009206275.1 NC_028885_p66 hypothetical protein phrog_8597 unknown function unknown function -1 62864 63124
YP_009206224.1 NC_028885_p15 hypothetical protein phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism 1 14949 25145
YP_009206237.1 NC_028885_p28 hypothetical protein phrog_2452 unknown function unknown function -1 33348 33635
YP_009206215.1 NC_028885_p6 portal protein phrog_1216 portal protein head and packaging 1 3941 6121
YP_009206278.1 NC_028885_p69 hypothetical protein phrog_335 phosphatase other -1 64468 64908
YP_009206299.1 NC_028885_p90 hypothetical protein phrog_9047 unknown function unknown function -1 71924 72355
YP_009206273.1 NC_028885_p64 hypothetical protein phrog_8144 unknown function unknown function -1 61953 62225
YP_009206292.1 NC_028885_p83 hypothetical protein phrog_3968 unknown function unknown function -1 68686 68928
YP_009206255.1 NC_028885_p46 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 48194 48664
YP_009206253.1 NC_028885_p44 hypothetical protein phrog_8620 unknown function unknown function -1 47621 48019
YP_009206257.1 NC_028885_p48 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 48845 51460
YP_009206263.1 NC_028885_p54 ATP-dependent Clp protease ATP-binding subunit ClpX phrog_5534 unknown function unknown function -1 56342 57175
YP_009206227.1 NC_028885_p18 hypothetical protein phrog_8394 unknown function unknown function -1 25688 25924
YP_009206279.1 NC_028885_p70 hypothetical protein phrog_7756 unknown function unknown function -1 64908 65159
YP_009206283.1 NC_028885_p74 hypothetical protein phrog_8570 unknown function unknown function -1 66462 66647
YP_009206226.1 NC_028885_p17 hypothetical protein phrog_7891 unknown function unknown function -1 25374 25691
YP_009206262.1 NC_028885_p53 hypothetical protein phrog_4781 unknown function unknown function -1 56103 56345
YP_009206213.1 NC_028885_p4 hypothetical protein phrog_8880 unknown function unknown function -1 3184 3483
YP_009206251.1 NC_028885_p42 rIIA lysis inhibitor phrog_2979 RIIA lysis inhibitor lysis -1 44913 47429
YP_009206295.1 NC_028885_p86 hypothetical protein phrog_8657 unknown function unknown function -1 70216 70878
YP_009206222.1 NC_028885_p13 hypothetical protein phrog_2646 unknown function unknown function 1 12916 13383
YP_009206296.1 NC_028885_p87 hypothetical protein phrog_9146 unknown function unknown function -1 71081 71347
YP_009206259.1 NC_028885_p50 RecD-like DNA helicase YrrC phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism -1 51987 53153
YP_009206212.1 NC_028885_p3 hypothetical protein phrog_2125 virion structural protein head and packaging 1 2418 3152
YP_009206254.1 NC_028885_p45 hypothetical protein phrog_10189 unknown function unknown function -1 48022 48162
YP_009206270.1 NC_028885_p61 hypothetical protein phrog_6140 unknown function unknown function -1 60130 60354
YP_009206288.1 NC_028885_p79 hypothetical protein phrog_8449 unknown function unknown function -1 67622 67924
YP_009206256.1 NC_028885_p47 hypothetical protein phrog_12945 ferredoxin moron, auxiliary metabolic gene and host takeover -1 48624 48848
YP_009206280.1 NC_028885_p71 hypothetical protein phrog_2072 unknown function unknown function -1 65159 65560
YP_009206289.1 NC_028885_p80 hypothetical protein phrog_2614 unknown function unknown function -1 67908 68204
YP_009206266.1 NC_028885_p57 hypothetical protein phrog_8374 unknown function unknown function -1 57853 58368
YP_009206261.1 NC_028885_p52 hypothetical protein phrog_1297 ATPase other -1 55001 56071
YP_009206230.1 NC_028885_p21 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 27240 27800
YP_009206214.1 NC_028885_p5 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism -1 3487 3873
YP_009206211.1 NC_028885_p2 hypothetical protein phrog_38 terminase large subunit head and packaging 1 769 2421
YP_009206260.1 NC_028885_p51 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism -1 53243 54472
YP_009206250.1 NC_028885_p41 lysis inhibitor phrog_2886 RIIB lysis inhibitor lysis -1 43162 44901
YP_009206293.1 NC_028885_p84 hypothetical protein phrog_7624 unknown function unknown function -1 68943 69134
YP_009206264.1 NC_028885_p55 hypothetical protein phrog_8112 unknown function unknown function -1 57203 57388
YP_009206241.1 NC_028885_p32 hypothetical protein phrog_3370 unknown function unknown function 1 36128 36799
YP_009206217.1 NC_028885_p8 MJ0042 family finger-like protein phrog_2120 tail length tape measure protein tail 1 6529 7731
YP_009206286.1 NC_028885_p77 hypothetical protein phrog_8885 unknown function unknown function -1 67167 67385
YP_009206248.1 NC_028885_p39 hypothetical protein phrog_18580 unknown function unknown function -1 42489 42689
YP_009206285.1 NC_028885_p76 hypothetical protein phrog_8334 unknown function unknown function -1 66937 67170
YP_009206281.1 NC_028885_p72 hypothetical protein phrog_8775 unknown function unknown function -1 65560 65895
YP_009206274.1 NC_028885_p65 hypothetical protein phrog_8144 unknown function unknown function -1 62258 62572
YP_009206282.1 NC_028885_p73 hypothetical protein phrog_6271 toxin moron, auxiliary metabolic gene and host takeover -1 66080 66370
YP_009206235.1 NC_028885_p26 DNA primase phrog_2135 DNA primase DNA, RNA and nucleotide metabolism -1 30153 32321
YP_009206272.1 NC_028885_p63 hypothetical protein phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism -1 60677 61918
YP_009206271.1 NC_028885_p62 hypothetical protein phrog_8738 unknown function unknown function -1 60427 60579
YP_009206238.1 NC_028885_p29 hypothetical protein phrog_3360 unknown function unknown function -1 33725 34153
YP_009206231.1 NC_028885_p22 hypothetical protein phrog_3934 unknown function unknown function -1 27788 28231
YP_009206258.1 NC_028885_p49 hypothetical protein phrog_7095 unknown function unknown function -1 51460 51987
YP_009206298.1 NC_028885_p89 hypothetical protein phrog_8800 unknown function unknown function -1 71712 71924
YP_009206232.1 NC_028885_p23 hypothetical protein singleton unknown function unknown function -1 28228 28455
YP_009206228.1 NC_028885_p19 hypothetical protein phrog_7212 unknown function unknown function -1 26329 26733
YP_009206210.1 NC_028885_p1 hypothetical protein phrog_2109 unknown function unknown function 1 44 772
YP_009206245.1 NC_028885_p36 hypothetical protein phrog_312 Rz-like spanin lysis 1 41126 41638
YP_009206225.1 NC_028885_p16 hypothetical protein phrog_8152 unknown function unknown function -1 25161 25364
YP_009206220.1 NC_028885_p11 hypothetical protein phrog_2050 virion structural protein head and packaging 1 9880 10656
YP_009206240.1 NC_028885_p31 hypothetical protein phrog_4047 unknown function unknown function 1 35832 36131
YP_009206287.1 NC_028885_p78 hypothetical protein phrog_8477 unknown function unknown function -1 67415 67618
YP_009206294.1 NC_028885_p85 hypothetical protein phrog_6483 unknown function unknown function -1 69542 69796
YP_009206233.1 NC_028885_p24 hypothetical protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 28597 29343
YP_009206242.1 NC_028885_p33 tail fiber protein phrog_7697 tail fiber protein tail 1 36838 40059
YP_009206244.1 NC_028885_p35 hypothetical protein phrog_3108 unknown function unknown function 1 40605 41129
YP_009206290.1 NC_028885_p81 hypothetical protein phrog_7875 unknown function unknown function -1 68208 68459
YP_009206252.1 NC_028885_p43 hypothetical protein phrog_10495 HNH endonuclease DNA, RNA and nucleotide metabolism -1 47433 47624
YP_009206268.1 NC_028885_p59 hypothetical protein phrog_8613 unknown function unknown function -1 58949 59503
YP_009206216.1 NC_028885_p7 hypothetical protein phrog_2346 unknown function unknown function 1 6191 6529