| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028885 |
Definition |
Pseudomonas phage DL64, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; unclassified Litunavirus. |
DB of origin |
REFSEQ |
Length |
72378 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
90 |
%GC |
54.95 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009206223.1 | NC_028885_p14 | hypothetical protein | phrog_6467 | unknown function | unknown function | 1 | 13383 | 14948 |
| YP_009206234.1 | NC_028885_p25 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 29370 | 30104 |
| YP_009206229.1 | NC_028885_p20 | hypothetical protein | phrog_7564 | unknown function | unknown function | -1 | 26791 | 27228 |
| YP_009206218.1 | NC_028885_p9 | hypothetical protein | phrog_1357 | major head protein | head and packaging | 1 | 7766 | 8965 |
| YP_009206239.1 | NC_028885_p30 | tail fiber protein | phrog_496 | tail fiber protein | tail | 1 | 34522 | 35835 |
| YP_009206265.1 | NC_028885_p56 | hypothetical protein | phrog_12464 | unknown function | unknown function | -1 | 57632 | 57856 |
| YP_009206267.1 | NC_028885_p58 | hypothetical protein | phrog_8451 | unknown function | unknown function | -1 | 58368 | 58949 |
| YP_009206236.1 | NC_028885_p27 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 32336 | 33346 |
| YP_009206247.1 | NC_028885_p38 | hypothetical protein | phrog_8307 | unknown function | unknown function | -1 | 42248 | 42439 |
| YP_009206249.1 | NC_028885_p40 | hypothetical protein | phrog_7722 | unknown function | unknown function | -1 | 42890 | 43114 |
| YP_009206297.1 | NC_028885_p88 | hypothetical protein | phrog_10651 | unknown function | unknown function | -1 | 71455 | 71715 |
| YP_009206243.1 | NC_028885_p34 | hypothetical protein | phrog_2687 | unknown function | unknown function | 1 | 40366 | 40608 |
| YP_009206284.1 | NC_028885_p75 | hypothetical protein | phrog_8895 | unknown function | unknown function | -1 | 66719 | 66940 |
| YP_009206246.1 | NC_028885_p37 | hypothetical protein | phrog_8796 | unknown function | unknown function | -1 | 41701 | 42255 |
| YP_009206291.1 | NC_028885_p82 | hypothetical protein | phrog_3968 | unknown function | unknown function | -1 | 68459 | 68689 |
| YP_009206269.1 | NC_028885_p60 | hypothetical protein | phrog_7111 | unknown function | unknown function | -1 | 59500 | 60126 |
| YP_009206221.1 | NC_028885_p12 | hypothetical protein | phrog_2220 | unknown function | unknown function | 1 | 10713 | 12935 |
| YP_009206277.1 | NC_028885_p68 | hypothetical protein | phrog_8585 | unknown function | unknown function | -1 | 64081 | 64428 |
| YP_009206219.1 | NC_028885_p10 | hypothetical protein | phrog_2130 | unknown function | unknown function | 1 | 9022 | 9687 |
| YP_009206276.1 | NC_028885_p67 | RNA polymerase | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 63137 | 64069 |
| YP_009206275.1 | NC_028885_p66 | hypothetical protein | phrog_8597 | unknown function | unknown function | -1 | 62864 | 63124 |
| YP_009206224.1 | NC_028885_p15 | hypothetical protein | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 14949 | 25145 |
| YP_009206237.1 | NC_028885_p28 | hypothetical protein | phrog_2452 | unknown function | unknown function | -1 | 33348 | 33635 |
| YP_009206215.1 | NC_028885_p6 | portal protein | phrog_1216 | portal protein | head and packaging | 1 | 3941 | 6121 |
| YP_009206278.1 | NC_028885_p69 | hypothetical protein | phrog_335 | phosphatase | other | -1 | 64468 | 64908 |
| YP_009206299.1 | NC_028885_p90 | hypothetical protein | phrog_9047 | unknown function | unknown function | -1 | 71924 | 72355 |
| YP_009206273.1 | NC_028885_p64 | hypothetical protein | phrog_8144 | unknown function | unknown function | -1 | 61953 | 62225 |
| YP_009206292.1 | NC_028885_p83 | hypothetical protein | phrog_3968 | unknown function | unknown function | -1 | 68686 | 68928 |
| YP_009206255.1 | NC_028885_p46 | dCMP deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | -1 | 48194 | 48664 |
| YP_009206253.1 | NC_028885_p44 | hypothetical protein | phrog_8620 | unknown function | unknown function | -1 | 47621 | 48019 |
| YP_009206257.1 | NC_028885_p48 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 48845 | 51460 |
| YP_009206263.1 | NC_028885_p54 | ATP-dependent Clp protease ATP-binding subunit ClpX | phrog_5534 | unknown function | unknown function | -1 | 56342 | 57175 |
| YP_009206227.1 | NC_028885_p18 | hypothetical protein | phrog_8394 | unknown function | unknown function | -1 | 25688 | 25924 |
| YP_009206279.1 | NC_028885_p70 | hypothetical protein | phrog_7756 | unknown function | unknown function | -1 | 64908 | 65159 |
| YP_009206283.1 | NC_028885_p74 | hypothetical protein | phrog_8570 | unknown function | unknown function | -1 | 66462 | 66647 |
| YP_009206226.1 | NC_028885_p17 | hypothetical protein | phrog_7891 | unknown function | unknown function | -1 | 25374 | 25691 |
| YP_009206262.1 | NC_028885_p53 | hypothetical protein | phrog_4781 | unknown function | unknown function | -1 | 56103 | 56345 |
| YP_009206213.1 | NC_028885_p4 | hypothetical protein | phrog_8880 | unknown function | unknown function | -1 | 3184 | 3483 |
| YP_009206251.1 | NC_028885_p42 | rIIA lysis inhibitor | phrog_2979 | RIIA lysis inhibitor | lysis | -1 | 44913 | 47429 |
| YP_009206295.1 | NC_028885_p86 | hypothetical protein | phrog_8657 | unknown function | unknown function | -1 | 70216 | 70878 |
| YP_009206222.1 | NC_028885_p13 | hypothetical protein | phrog_2646 | unknown function | unknown function | 1 | 12916 | 13383 |
| YP_009206296.1 | NC_028885_p87 | hypothetical protein | phrog_9146 | unknown function | unknown function | -1 | 71081 | 71347 |
| YP_009206259.1 | NC_028885_p50 | RecD-like DNA helicase YrrC | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | -1 | 51987 | 53153 |
| YP_009206212.1 | NC_028885_p3 | hypothetical protein | phrog_2125 | virion structural protein | head and packaging | 1 | 2418 | 3152 |
| YP_009206254.1 | NC_028885_p45 | hypothetical protein | phrog_10189 | unknown function | unknown function | -1 | 48022 | 48162 |
| YP_009206270.1 | NC_028885_p61 | hypothetical protein | phrog_6140 | unknown function | unknown function | -1 | 60130 | 60354 |
| YP_009206288.1 | NC_028885_p79 | hypothetical protein | phrog_8449 | unknown function | unknown function | -1 | 67622 | 67924 |
| YP_009206256.1 | NC_028885_p47 | hypothetical protein | phrog_12945 | ferredoxin | moron, auxiliary metabolic gene and host takeover | -1 | 48624 | 48848 |
| YP_009206280.1 | NC_028885_p71 | hypothetical protein | phrog_2072 | unknown function | unknown function | -1 | 65159 | 65560 |
| YP_009206289.1 | NC_028885_p80 | hypothetical protein | phrog_2614 | unknown function | unknown function | -1 | 67908 | 68204 |
| YP_009206266.1 | NC_028885_p57 | hypothetical protein | phrog_8374 | unknown function | unknown function | -1 | 57853 | 58368 |
| YP_009206261.1 | NC_028885_p52 | hypothetical protein | phrog_1297 | ATPase | other | -1 | 55001 | 56071 |
| YP_009206230.1 | NC_028885_p21 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 27240 | 27800 |
| YP_009206214.1 | NC_028885_p5 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | -1 | 3487 | 3873 |
| YP_009206211.1 | NC_028885_p2 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 769 | 2421 |
| YP_009206260.1 | NC_028885_p51 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 53243 | 54472 |
| YP_009206250.1 | NC_028885_p41 | lysis inhibitor | phrog_2886 | RIIB lysis inhibitor | lysis | -1 | 43162 | 44901 |
| YP_009206293.1 | NC_028885_p84 | hypothetical protein | phrog_7624 | unknown function | unknown function | -1 | 68943 | 69134 |
| YP_009206264.1 | NC_028885_p55 | hypothetical protein | phrog_8112 | unknown function | unknown function | -1 | 57203 | 57388 |
| YP_009206241.1 | NC_028885_p32 | hypothetical protein | phrog_3370 | unknown function | unknown function | 1 | 36128 | 36799 |
| YP_009206217.1 | NC_028885_p8 | MJ0042 family finger-like protein | phrog_2120 | tail length tape measure protein | tail | 1 | 6529 | 7731 |
| YP_009206286.1 | NC_028885_p77 | hypothetical protein | phrog_8885 | unknown function | unknown function | -1 | 67167 | 67385 |
| YP_009206248.1 | NC_028885_p39 | hypothetical protein | phrog_18580 | unknown function | unknown function | -1 | 42489 | 42689 |
| YP_009206285.1 | NC_028885_p76 | hypothetical protein | phrog_8334 | unknown function | unknown function | -1 | 66937 | 67170 |
| YP_009206281.1 | NC_028885_p72 | hypothetical protein | phrog_8775 | unknown function | unknown function | -1 | 65560 | 65895 |
| YP_009206274.1 | NC_028885_p65 | hypothetical protein | phrog_8144 | unknown function | unknown function | -1 | 62258 | 62572 |
| YP_009206282.1 | NC_028885_p73 | hypothetical protein | phrog_6271 | toxin | moron, auxiliary metabolic gene and host takeover | -1 | 66080 | 66370 |
| YP_009206235.1 | NC_028885_p26 | DNA primase | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 30153 | 32321 |
| YP_009206272.1 | NC_028885_p63 | hypothetical protein | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 60677 | 61918 |
| YP_009206271.1 | NC_028885_p62 | hypothetical protein | phrog_8738 | unknown function | unknown function | -1 | 60427 | 60579 |
| YP_009206238.1 | NC_028885_p29 | hypothetical protein | phrog_3360 | unknown function | unknown function | -1 | 33725 | 34153 |
| YP_009206231.1 | NC_028885_p22 | hypothetical protein | phrog_3934 | unknown function | unknown function | -1 | 27788 | 28231 |
| YP_009206258.1 | NC_028885_p49 | hypothetical protein | phrog_7095 | unknown function | unknown function | -1 | 51460 | 51987 |
| YP_009206298.1 | NC_028885_p89 | hypothetical protein | phrog_8800 | unknown function | unknown function | -1 | 71712 | 71924 |
| YP_009206232.1 | NC_028885_p23 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28228 | 28455 |
| YP_009206228.1 | NC_028885_p19 | hypothetical protein | phrog_7212 | unknown function | unknown function | -1 | 26329 | 26733 |
| YP_009206210.1 | NC_028885_p1 | hypothetical protein | phrog_2109 | unknown function | unknown function | 1 | 44 | 772 |
| YP_009206245.1 | NC_028885_p36 | hypothetical protein | phrog_312 | Rz-like spanin | lysis | 1 | 41126 | 41638 |
| YP_009206225.1 | NC_028885_p16 | hypothetical protein | phrog_8152 | unknown function | unknown function | -1 | 25161 | 25364 |
| YP_009206220.1 | NC_028885_p11 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | 1 | 9880 | 10656 |
| YP_009206240.1 | NC_028885_p31 | hypothetical protein | phrog_4047 | unknown function | unknown function | 1 | 35832 | 36131 |
| YP_009206287.1 | NC_028885_p78 | hypothetical protein | phrog_8477 | unknown function | unknown function | -1 | 67415 | 67618 |
| YP_009206294.1 | NC_028885_p85 | hypothetical protein | phrog_6483 | unknown function | unknown function | -1 | 69542 | 69796 |
| YP_009206233.1 | NC_028885_p24 | hypothetical protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 28597 | 29343 |
| YP_009206242.1 | NC_028885_p33 | tail fiber protein | phrog_7697 | tail fiber protein | tail | 1 | 36838 | 40059 |
| YP_009206244.1 | NC_028885_p35 | hypothetical protein | phrog_3108 | unknown function | unknown function | 1 | 40605 | 41129 |
| YP_009206290.1 | NC_028885_p81 | hypothetical protein | phrog_7875 | unknown function | unknown function | -1 | 68208 | 68459 |
| YP_009206252.1 | NC_028885_p43 | hypothetical protein | phrog_10495 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 47433 | 47624 |
| YP_009206268.1 | NC_028885_p59 | hypothetical protein | phrog_8613 | unknown function | unknown function | -1 | 58949 | 59503 |
| YP_009206216.1 | NC_028885_p7 | hypothetical protein | phrog_2346 | unknown function | unknown function | 1 | 6191 | 6529 |