Genomic map of Bacillus phage phi4B1 (NC_028886)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028886
Definition
Bacillus phage phi4B1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
38663
Host Name
Bacillus thuringiensis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
35.89
Number of singletons
16
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009206340.1 NC_028886_p41 Erf family protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 29263 29952
YP_009206348.1 NC_028886_p49 hypothetical protein phrog_1065 unknown function unknown function 1 33491 34003
YP_009206326.1 NC_028886_p27 site-specific recombinase phrog_1 integrase integration and excision -1 23284 24441
YP_009206334.1 NC_028886_p35 hypothetical protein singleton unknown function unknown function 1 27814 28002
YP_009206303.1 NC_028886_p4 SPP1 family portal protein phrog_64 portal protein head and packaging 1 1961 3304
YP_009206339.1 NC_028886_p40 hypothetical protein phrog_16626 unknown function unknown function 1 29056 29232
YP_009206323.1 NC_028886_p24 hypothetical protein singleton unknown function unknown function 1 21519 21686
YP_009206341.1 NC_028886_p42 hypothetical protein singleton unknown function unknown function 1 29952 30131
YP_009206346.1 NC_028886_p47 hypothetical protein phrog_5337 unknown function unknown function 1 32210 32824
YP_009206325.1 NC_028886_p26 hypothetical protein singleton unknown function unknown function -1 22361 22657
YP_009206331.1 NC_028886_p32 hypothetical protein phrog_463 anti-repressor transcription regulation 1 26127 26963
YP_009206307.1 NC_028886_p8 hypothetical protein phrog_2395 unknown function unknown function 1 4743 4979
YP_009206343.1 NC_028886_p44 hypothetical protein phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 30398 31177
YP_009206349.1 NC_028886_p50 hypothetical protein phrog_5688 unknown function unknown function 1 34077 34256
YP_009206350.1 NC_028886_p51 hypothetical protein singleton unknown function unknown function 1 34642 35148
YP_009206333.1 NC_028886_p34 hypothetical protein singleton unknown function unknown function 1 27497 27799
YP_009206315.1 NC_028886_p16 hypothetical protein phrog_885 major tail protein tail 1 9141 9674
YP_009206347.1 NC_028886_p48 hypothetical protein phrog_8281 unknown function unknown function 1 32990 33454
YP_009206338.1 NC_028886_p39 hypothetical protein phrog_13151 unknown function unknown function 1 28880 29044
YP_009206342.1 NC_028886_p43 hypothetical protein phrog_8526 unknown function unknown function 1 30128 30397
YP_009206317.1 NC_028886_p18 hypothetical protein phrog_1294 peptide methionine sulfoxide reductase other 1 10166 10426
YP_009206353.1 NC_028886_p54 hypothetical protein singleton unknown function unknown function 1 36832 37158
YP_009206314.1 NC_028886_p15 hypothetical protein phrog_957 head protein head and packaging 1 8641 9021
YP_009206329.1 NC_028886_p30 Xre family toxin-antitoxin system antitoxin component phrog_1468 transcriptional repressor transcription regulation 1 25656 25841
YP_009206324.1 NC_028886_p25 GNAT family acetyltransferase phrog_1758 acetyltransferase other 1 21690 22256
YP_009206306.1 NC_028886_p7 hypothetical protein singleton unknown function unknown function 1 4562 4756
YP_009206318.1 NC_028886_p19 tail tape measure protein phrog_58 tail length tape measure protein tail 1 10447 13683
YP_009206336.1 NC_028886_p37 hypothetical protein singleton unknown function unknown function 1 28324 28482
YP_009206308.1 NC_028886_p9 hypothetical protein phrog_2232 unknown function unknown function -1 5028 5597
YP_009206305.1 NC_028886_p6 hypothetical protein phrog_15952 unknown function unknown function 1 4294 4545
YP_009206352.1 NC_028886_p53 hypothetical protein phrog_2275 unknown function unknown function 1 35496 35795
YP_009206321.1 NC_028886_p22 holin family protein phrog_199 holin lysis 1 19885 20349
YP_009206330.1 NC_028886_p31 hypothetical protein phrog_823 unknown function unknown function 1 25841 26113
YP_009206320.1 NC_028886_p21 minor structural protein phrog_1775 minor head protein head and packaging 1 15212 19867
YP_009206332.1 NC_028886_p33 hypothetical protein singleton unknown function unknown function 1 26994 27284
YP_009206304.1 NC_028886_p5 protein F-like protein phrog_115 minor head protein head and packaging 1 3282 4316
YP_009206355.1 NC_028886_p56 hypothetical protein singleton unknown function unknown function 1 37629 37961
YP_009206302.1 NC_028886_p3 hypothetical protein singleton unknown function unknown function 1 1744 1935
YP_009206354.1 NC_028886_p55 ArpU family transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 37185 37568
YP_009206344.1 NC_028886_p45 IstB-like ATP binding domain protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 31107 31985
YP_009206328.1 NC_028886_p29 DNA-binding helix-turn-helix protein phrog_8 transcriptional regulator transcription regulation -1 24960 25421
YP_009206310.1 NC_028886_p11 hypothetical protein phrog_172 head scaffolding protein head and packaging 1 6119 6694
YP_009206335.1 NC_028886_p36 hypothetical protein singleton unknown function unknown function -1 28007 28231
YP_009206311.1 NC_028886_p12 hypothetical protein phrog_422 major head protein head and packaging 1 6707 7528
YP_009206319.1 NC_028886_p20 tail component phrog_202 distal tail protein Dit tail 1 13694 15208
YP_009206345.1 NC_028886_p46 hypothetical protein singleton unknown function unknown function 1 32022 32210
YP_009206301.1 NC_028886_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 428 1732
YP_009206327.1 NC_028886_p28 hypothetical protein phrog_87 metallo-protease other -1 24519 24944
YP_009206312.1 NC_028886_p13 hypothetical protein phrog_1059 head-tail adaptor connector 1 7885 8238
YP_009206322.1 NC_028886_p23 N-acetylmuramoyl-L-alanine amidase phrog_3088 amidase lysis 1 20349 21077
YP_009206309.1 NC_028886_p10 hypothetical protein singleton unknown function unknown function 1 5653 5895
YP_009206351.1 NC_028886_p52 hypothetical protein phrog_30903 unknown function unknown function 1 35181 35348
YP_009206337.1 NC_028886_p38 hypothetical protein singleton unknown function unknown function 1 28605 28838
YP_009206300.1 NC_028886_p1 terminase small subunit phrog_51 terminase small subunit head and packaging 1 1 441
YP_009206313.1 NC_028886_p14 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 8228 8644
YP_009206316.1 NC_028886_p17 hypothetical protein phrog_1021 unknown function unknown function 1 9738 10130