| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028886 |
Definition |
Bacillus phage phi4B1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
38663 |
Host Name |
Bacillus thuringiensis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
35.89 |
Number of singletons |
16 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009206340.1 | NC_028886_p41 | Erf family protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 29263 | 29952 |
| YP_009206348.1 | NC_028886_p49 | hypothetical protein | phrog_1065 | unknown function | unknown function | 1 | 33491 | 34003 |
| YP_009206326.1 | NC_028886_p27 | site-specific recombinase | phrog_1 | integrase | integration and excision | -1 | 23284 | 24441 |
| YP_009206334.1 | NC_028886_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27814 | 28002 |
| YP_009206303.1 | NC_028886_p4 | SPP1 family portal protein | phrog_64 | portal protein | head and packaging | 1 | 1961 | 3304 |
| YP_009206339.1 | NC_028886_p40 | hypothetical protein | phrog_16626 | unknown function | unknown function | 1 | 29056 | 29232 |
| YP_009206323.1 | NC_028886_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21519 | 21686 |
| YP_009206341.1 | NC_028886_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29952 | 30131 |
| YP_009206346.1 | NC_028886_p47 | hypothetical protein | phrog_5337 | unknown function | unknown function | 1 | 32210 | 32824 |
| YP_009206325.1 | NC_028886_p26 | hypothetical protein | singleton | unknown function | unknown function | -1 | 22361 | 22657 |
| YP_009206331.1 | NC_028886_p32 | hypothetical protein | phrog_463 | anti-repressor | transcription regulation | 1 | 26127 | 26963 |
| YP_009206307.1 | NC_028886_p8 | hypothetical protein | phrog_2395 | unknown function | unknown function | 1 | 4743 | 4979 |
| YP_009206343.1 | NC_028886_p44 | hypothetical protein | phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 30398 | 31177 |
| YP_009206349.1 | NC_028886_p50 | hypothetical protein | phrog_5688 | unknown function | unknown function | 1 | 34077 | 34256 |
| YP_009206350.1 | NC_028886_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34642 | 35148 |
| YP_009206333.1 | NC_028886_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27497 | 27799 |
| YP_009206315.1 | NC_028886_p16 | hypothetical protein | phrog_885 | major tail protein | tail | 1 | 9141 | 9674 |
| YP_009206347.1 | NC_028886_p48 | hypothetical protein | phrog_8281 | unknown function | unknown function | 1 | 32990 | 33454 |
| YP_009206338.1 | NC_028886_p39 | hypothetical protein | phrog_13151 | unknown function | unknown function | 1 | 28880 | 29044 |
| YP_009206342.1 | NC_028886_p43 | hypothetical protein | phrog_8526 | unknown function | unknown function | 1 | 30128 | 30397 |
| YP_009206317.1 | NC_028886_p18 | hypothetical protein | phrog_1294 | peptide methionine sulfoxide reductase | other | 1 | 10166 | 10426 |
| YP_009206353.1 | NC_028886_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36832 | 37158 |
| YP_009206314.1 | NC_028886_p15 | hypothetical protein | phrog_957 | head protein | head and packaging | 1 | 8641 | 9021 |
| YP_009206329.1 | NC_028886_p30 | Xre family toxin-antitoxin system antitoxin component | phrog_1468 | transcriptional repressor | transcription regulation | 1 | 25656 | 25841 |
| YP_009206324.1 | NC_028886_p25 | GNAT family acetyltransferase | phrog_1758 | acetyltransferase | other | 1 | 21690 | 22256 |
| YP_009206306.1 | NC_028886_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4562 | 4756 |
| YP_009206318.1 | NC_028886_p19 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 10447 | 13683 |
| YP_009206336.1 | NC_028886_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28324 | 28482 |
| YP_009206308.1 | NC_028886_p9 | hypothetical protein | phrog_2232 | unknown function | unknown function | -1 | 5028 | 5597 |
| YP_009206305.1 | NC_028886_p6 | hypothetical protein | phrog_15952 | unknown function | unknown function | 1 | 4294 | 4545 |
| YP_009206352.1 | NC_028886_p53 | hypothetical protein | phrog_2275 | unknown function | unknown function | 1 | 35496 | 35795 |
| YP_009206321.1 | NC_028886_p22 | holin family protein | phrog_199 | holin | lysis | 1 | 19885 | 20349 |
| YP_009206330.1 | NC_028886_p31 | hypothetical protein | phrog_823 | unknown function | unknown function | 1 | 25841 | 26113 |
| YP_009206320.1 | NC_028886_p21 | minor structural protein | phrog_1775 | minor head protein | head and packaging | 1 | 15212 | 19867 |
| YP_009206332.1 | NC_028886_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26994 | 27284 |
| YP_009206304.1 | NC_028886_p5 | protein F-like protein | phrog_115 | minor head protein | head and packaging | 1 | 3282 | 4316 |
| YP_009206355.1 | NC_028886_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37629 | 37961 |
| YP_009206302.1 | NC_028886_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1744 | 1935 |
| YP_009206354.1 | NC_028886_p55 | ArpU family transcriptional regulator | phrog_248 | transcriptional activator | transcription regulation | 1 | 37185 | 37568 |
| YP_009206344.1 | NC_028886_p45 | IstB-like ATP binding domain protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 31107 | 31985 |
| YP_009206328.1 | NC_028886_p29 | DNA-binding helix-turn-helix protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 24960 | 25421 |
| YP_009206310.1 | NC_028886_p11 | hypothetical protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 6119 | 6694 |
| YP_009206335.1 | NC_028886_p36 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28007 | 28231 |
| YP_009206311.1 | NC_028886_p12 | hypothetical protein | phrog_422 | major head protein | head and packaging | 1 | 6707 | 7528 |
| YP_009206319.1 | NC_028886_p20 | tail component | phrog_202 | distal tail protein Dit | tail | 1 | 13694 | 15208 |
| YP_009206345.1 | NC_028886_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32022 | 32210 |
| YP_009206301.1 | NC_028886_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 428 | 1732 |
| YP_009206327.1 | NC_028886_p28 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 24519 | 24944 |
| YP_009206312.1 | NC_028886_p13 | hypothetical protein | phrog_1059 | head-tail adaptor | connector | 1 | 7885 | 8238 |
| YP_009206322.1 | NC_028886_p23 | N-acetylmuramoyl-L-alanine amidase | phrog_3088 | amidase | lysis | 1 | 20349 | 21077 |
| YP_009206309.1 | NC_028886_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5653 | 5895 |
| YP_009206351.1 | NC_028886_p52 | hypothetical protein | phrog_30903 | unknown function | unknown function | 1 | 35181 | 35348 |
| YP_009206337.1 | NC_028886_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28605 | 28838 |
| YP_009206300.1 | NC_028886_p1 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 1 | 441 |
| YP_009206313.1 | NC_028886_p14 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 8228 | 8644 |
| YP_009206316.1 | NC_028886_p17 | hypothetical protein | phrog_1021 | unknown function | unknown function | 1 | 9738 | 10130 |