| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028898 |
Definition |
Mannheimia phage vB_MhM_587AP1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Baylorvirus; unclassified Baylorvirus. |
DB of origin |
REFSEQ |
Length |
35764 |
Host Name |
Mannheimia haemolytica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
51 |
%GC |
42.06 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009207764.1 | NC_028898_p11 | DnaK suppressor protein/ C4-type zinc finger protein | phrog_54 | DksA-like zinc-finger protein | other | 1 | 8214 | 8435 |
| YP_009207791.1 | NC_028898_p38 | hypothetical protein | phrog_7167 | unknown function | unknown function | 1 | 28481 | 28750 |
| YP_009207780.1 | NC_028898_p27 | hypothetical protein | phrog_3878 | unknown function | unknown function | 1 | 21924 | 22343 |
| YP_009207758.1 | NC_028898_p5 | terminase endonuclease subunit | phrog_74 | terminase small subunit | head and packaging | 1 | 5317 | 6006 |
| YP_009207776.1 | NC_028898_p23 | hypothetical protein | phrog_3342 | unknown function | unknown function | 1 | 19300 | 19563 |
| YP_009207782.1 | NC_028898_p29 | tail protein D | phrog_52 | tail protein | tail | 1 | 22780 | 24021 |
| YP_009207794.1 | NC_028898_p41 | hypothetical protein | phrog_7184 | unknown function | unknown function | 1 | 29203 | 29445 |
| YP_009207759.1 | NC_028898_p6 | head completion protein L | phrog_71 | head-tail adaptor Ad1 | connector | 1 | 6118 | 6633 |
| YP_009207778.1 | NC_028898_p25 | tail tube protein FII | phrog_55 | head closure | connector | 1 | 20855 | 21361 |
| YP_009207766.1 | NC_028898_p13 | tail synthesis protein S | phrog_26 | tail completion or Neck1 protein | connector | 1 | 8910 | 9368 |
| YP_009207795.1 | NC_028898_p42 | hypothetical protein | phrog_8050 | unknown function | unknown function | 1 | 29442 | 29774 |
| YP_009207781.1 | NC_028898_p28 | tail protein U | phrog_76 | tail protein | tail | 1 | 22343 | 22780 |
| YP_009207757.1 | NC_028898_p4 | major capsid protein N | phrog_70 | major head protein | head and packaging | 1 | 4270 | 5298 |
| YP_009207773.1 | NC_028898_p20 | tail formation protein I | phrog_48 | tail protein | tail | 1 | 15139 | 15678 |
| YP_009207785.1 | NC_028898_p32 | hypothetical protein | phrog_7191 | unknown function | unknown function | -1 | 25607 | 25936 |
| YP_009207768.1 | NC_028898_p15 | hypothetical protein | phrog_7264 | unknown function | unknown function | 1 | 12713 | 12889 |
| YP_009207772.1 | NC_028898_p19 | baseplate assembly protein J | phrog_6 | baseplate wedge subunit | tail | 1 | 14235 | 15152 |
| YP_009207761.1 | NC_028898_p8 | holin | phrog_20 | holin | lysis | 1 | 6848 | 7054 |
| YP_009207790.1 | NC_028898_p37 | hypothetical protein | phrog_5516 | unknown function | unknown function | 1 | 28063 | 28335 |
| YP_009207763.1 | NC_028898_p10 | hypothetical protein | phrog_89 | Rz-like spanin | lysis | 1 | 7610 | 8065 |
| YP_009207784.1 | NC_028898_p31 | transposase | phrog_157 | transposase | integration and excision | -1 | 24455 | 25495 |
| YP_009207798.1 | NC_028898_p45 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 32476 | 32928 |
| YP_009207803.1 | NC_028898_p50 | hypothetical protein | phrog_3887 | transcriptional regulator | transcription regulation | -1 | 34065 | 34247 |
| YP_009207787.1 | NC_028898_p34 | CI repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 26557 | 27243 |
| YP_009207788.1 | NC_028898_p35 | Cro repressor | phrog_35 | transcriptional repressor | transcription regulation | 1 | 27367 | 27579 |
| YP_009207775.1 | NC_028898_p22 | tail fiber assembly protein | phrog_2837 | tail protein | tail | 1 | 18696 | 19331 |
| YP_009207767.1 | NC_028898_p14 | tail protein T | phrog_28 | tail length tape measure protein | tail | 1 | 9736 | 12648 |
| YP_009207771.1 | NC_028898_p18 | baseplate assembly protein W | phrog_43 | baseplate wedge subunit | tail | 1 | 13903 | 14238 |
| YP_009207797.1 | NC_028898_p44 | hypothetical protein | phrog_7958 | unknown function | unknown function | 1 | 32144 | 32476 |
| YP_009207765.1 | NC_028898_p12 | tail completion protein R | phrog_65 | tail terminator | connector | 1 | 8432 | 8917 |
| YP_009207799.1 | NC_028898_p46 | hypothetical protein | phrog_474 | phosphofructokinase | other | 1 | 32939 | 33271 |
| YP_009207777.1 | NC_028898_p24 | tail sheath protein FI | phrog_23 | tail sheath | tail | 1 | 19665 | 20846 |
| YP_009207779.1 | NC_028898_p26 | tail protein E | phrog_103 | tail protein | tail | 1 | 21442 | 21756 |
| YP_009207762.1 | NC_028898_p9 | endolysin | phrog_7 | endolysin | lysis | 1 | 7047 | 7613 |
| YP_009207769.1 | NC_028898_p16 | hypothetical protein | phrog_5232 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 12882 | 13169 |
| YP_009207786.1 | NC_028898_p33 | hypothetical protein | phrog_2561 | DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 26035 | 26553 |
| YP_009207796.1 | NC_028898_p43 | replication protein A | phrog_91 | nicking at origin of replication | DNA, RNA and nucleotide metabolism | 1 | 29771 | 32131 |
| YP_009207760.1 | NC_028898_p7 | tail synthesis protein X | phrog_46 | baseplate hub | tail | 1 | 6630 | 6842 |
| YP_009207804.1 | NC_028898_p51 | integrase | phrog_1 | integrase | integration and excision | -1 | 34525 | 35523 |
| YP_009207792.1 | NC_028898_p39 | hypothetical protein | phrog_7176 | unknown function | unknown function | 1 | 28759 | 29052 |
| YP_009207783.1 | NC_028898_p30 | hypothetical protein | phrog_33030 | unknown function | unknown function | 1 | 24021 | 24395 |
| YP_009207793.1 | NC_028898_p40 | hypothetical protein | phrog_28920 | unknown function | unknown function | 1 | 29062 | 29187 |
| YP_009207802.1 | NC_028898_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33930 | 34046 |
| YP_009207789.1 | NC_028898_p36 | hypothetical protein | phrog_7837 | unknown function | unknown function | -1 | 27678 | 27923 |
| YP_009207755.1 | NC_028898_p2 | terminase ATPase subunit | phrog_2 | terminase large subunit | head and packaging | -1 | 1477 | 3315 |
| YP_009207801.1 | NC_028898_p48 | hypothetical protein | phrog_4996 | unknown function | unknown function | 1 | 33505 | 33795 |
| YP_009207770.1 | NC_028898_p17 | baseplate assembly protein V | phrog_11 | baseplate spike | tail | 1 | 13298 | 13903 |
| YP_009207756.1 | NC_028898_p3 | capsid scaffolding protein O | phrog_73 | head scaffolding protein | head and packaging | 1 | 3429 | 4256 |
| YP_009207800.1 | NC_028898_p47 | hypothetical protein | phrog_7183 | unknown function | unknown function | 1 | 33261 | 33530 |
| YP_009207774.1 | NC_028898_p21 | tail fiber protein H | phrog_1171 | tail spike protein | tail | 1 | 15681 | 18695 |
| YP_009207754.1 | NC_028898_p1 | capsid portal protein Q | phrog_68 | portal protein | head and packaging | -1 | 428 | 1468 |