Genomic map of Mannheimia phage vB_MhM_587AP1 (NC_028898)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028898
Definition
Mannheimia phage vB_MhM_587AP1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Baylorvirus; unclassified Baylorvirus.
DB of origin
REFSEQ
Length
35764
Host Name
Mannheimia haemolytica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
42.06
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009207764.1 NC_028898_p11 DnaK suppressor protein/ C4-type zinc finger protein phrog_54 DksA-like zinc-finger protein other 1 8214 8435
YP_009207791.1 NC_028898_p38 hypothetical protein phrog_7167 unknown function unknown function 1 28481 28750
YP_009207780.1 NC_028898_p27 hypothetical protein phrog_3878 unknown function unknown function 1 21924 22343
YP_009207758.1 NC_028898_p5 terminase endonuclease subunit phrog_74 terminase small subunit head and packaging 1 5317 6006
YP_009207776.1 NC_028898_p23 hypothetical protein phrog_3342 unknown function unknown function 1 19300 19563
YP_009207782.1 NC_028898_p29 tail protein D phrog_52 tail protein tail 1 22780 24021
YP_009207794.1 NC_028898_p41 hypothetical protein phrog_7184 unknown function unknown function 1 29203 29445
YP_009207759.1 NC_028898_p6 head completion protein L phrog_71 head-tail adaptor Ad1 connector 1 6118 6633
YP_009207778.1 NC_028898_p25 tail tube protein FII phrog_55 head closure connector 1 20855 21361
YP_009207766.1 NC_028898_p13 tail synthesis protein S phrog_26 tail completion or Neck1 protein connector 1 8910 9368
YP_009207795.1 NC_028898_p42 hypothetical protein phrog_8050 unknown function unknown function 1 29442 29774
YP_009207781.1 NC_028898_p28 tail protein U phrog_76 tail protein tail 1 22343 22780
YP_009207757.1 NC_028898_p4 major capsid protein N phrog_70 major head protein head and packaging 1 4270 5298
YP_009207773.1 NC_028898_p20 tail formation protein I phrog_48 tail protein tail 1 15139 15678
YP_009207785.1 NC_028898_p32 hypothetical protein phrog_7191 unknown function unknown function -1 25607 25936
YP_009207768.1 NC_028898_p15 hypothetical protein phrog_7264 unknown function unknown function 1 12713 12889
YP_009207772.1 NC_028898_p19 baseplate assembly protein J phrog_6 baseplate wedge subunit tail 1 14235 15152
YP_009207761.1 NC_028898_p8 holin phrog_20 holin lysis 1 6848 7054
YP_009207790.1 NC_028898_p37 hypothetical protein phrog_5516 unknown function unknown function 1 28063 28335
YP_009207763.1 NC_028898_p10 hypothetical protein phrog_89 Rz-like spanin lysis 1 7610 8065
YP_009207784.1 NC_028898_p31 transposase phrog_157 transposase integration and excision -1 24455 25495
YP_009207798.1 NC_028898_p45 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 32476 32928
YP_009207803.1 NC_028898_p50 hypothetical protein phrog_3887 transcriptional regulator transcription regulation -1 34065 34247
YP_009207787.1 NC_028898_p34 CI repressor phrog_4 transcriptional repressor transcription regulation -1 26557 27243
YP_009207788.1 NC_028898_p35 Cro repressor phrog_35 transcriptional repressor transcription regulation 1 27367 27579
YP_009207775.1 NC_028898_p22 tail fiber assembly protein phrog_2837 tail protein tail 1 18696 19331
YP_009207767.1 NC_028898_p14 tail protein T phrog_28 tail length tape measure protein tail 1 9736 12648
YP_009207771.1 NC_028898_p18 baseplate assembly protein W phrog_43 baseplate wedge subunit tail 1 13903 14238
YP_009207797.1 NC_028898_p44 hypothetical protein phrog_7958 unknown function unknown function 1 32144 32476
YP_009207765.1 NC_028898_p12 tail completion protein R phrog_65 tail terminator connector 1 8432 8917
YP_009207799.1 NC_028898_p46 hypothetical protein phrog_474 phosphofructokinase other 1 32939 33271
YP_009207777.1 NC_028898_p24 tail sheath protein FI phrog_23 tail sheath tail 1 19665 20846
YP_009207779.1 NC_028898_p26 tail protein E phrog_103 tail protein tail 1 21442 21756
YP_009207762.1 NC_028898_p9 endolysin phrog_7 endolysin lysis 1 7047 7613
YP_009207769.1 NC_028898_p16 hypothetical protein phrog_5232 toxin moron, auxiliary metabolic gene and host takeover 1 12882 13169
YP_009207786.1 NC_028898_p33 hypothetical protein phrog_2561 DNA ligase DNA, RNA and nucleotide metabolism -1 26035 26553
YP_009207796.1 NC_028898_p43 replication protein A phrog_91 nicking at origin of replication DNA, RNA and nucleotide metabolism 1 29771 32131
YP_009207760.1 NC_028898_p7 tail synthesis protein X phrog_46 baseplate hub tail 1 6630 6842
YP_009207804.1 NC_028898_p51 integrase phrog_1 integrase integration and excision -1 34525 35523
YP_009207792.1 NC_028898_p39 hypothetical protein phrog_7176 unknown function unknown function 1 28759 29052
YP_009207783.1 NC_028898_p30 hypothetical protein phrog_33030 unknown function unknown function 1 24021 24395
YP_009207793.1 NC_028898_p40 hypothetical protein phrog_28920 unknown function unknown function 1 29062 29187
YP_009207802.1 NC_028898_p49 hypothetical protein singleton unknown function unknown function -1 33930 34046
YP_009207789.1 NC_028898_p36 hypothetical protein phrog_7837 unknown function unknown function -1 27678 27923
YP_009207755.1 NC_028898_p2 terminase ATPase subunit phrog_2 terminase large subunit head and packaging -1 1477 3315
YP_009207801.1 NC_028898_p48 hypothetical protein phrog_4996 unknown function unknown function 1 33505 33795
YP_009207770.1 NC_028898_p17 baseplate assembly protein V phrog_11 baseplate spike tail 1 13298 13903
YP_009207756.1 NC_028898_p3 capsid scaffolding protein O phrog_73 head scaffolding protein head and packaging 1 3429 4256
YP_009207800.1 NC_028898_p47 hypothetical protein phrog_7183 unknown function unknown function 1 33261 33530
YP_009207774.1 NC_028898_p21 tail fiber protein H phrog_1171 tail spike protein tail 1 15681 18695
YP_009207754.1 NC_028898_p1 capsid portal protein Q phrog_68 portal protein head and packaging -1 428 1468