| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028901 |
Definition |
Escherichia phage slur05, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dhillonvirus; unclassified Dhillonvirus. |
DB of origin |
REFSEQ |
Length |
43900 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
54.54 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009208096.1 | NC_028901_p10 | hypothetical protein | phrog_1980 | tail fiber protein | tail | -1 | 5120 | 6805 |
| YP_009208123.1 | NC_028901_p37 | Phage lysozyme | phrog_7 | endolysin | lysis | -1 | 30523 | 31014 |
| YP_009208129.1 | NC_028901_p43 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32737 | 32991 |
| YP_009208128.1 | NC_028901_p42 | hypothetical protein | phrog_10243 | unknown function | unknown function | -1 | 32092 | 32664 |
| YP_009208132.1 | NC_028901_p46 | hypothetical protein | phrog_9366 | transposase | integration and excision | -1 | 36288 | 36617 |
| YP_009208127.1 | NC_028901_p41 | hypothetical protein | phrog_13628 | unknown function | unknown function | -1 | 31949 | 32095 |
| YP_009208103.1 | NC_028901_p17 | Phage minor tail protein | phrog_9922 | minor tail protein | tail | -1 | 13585 | 14223 |
| YP_009208107.1 | NC_028901_p21 | hypothetical protein | phrog_179 | tail terminator | connector | -1 | 18778 | 19200 |
| YP_009208094.1 | NC_028901_p8 | hypothetical protein | phrog_9871 | unknown function | unknown function | 1 | 3953 | 4474 |
| YP_009208126.1 | NC_028901_p40 | hypothetical protein | phrog_2531 | unknown function | unknown function | -1 | 31585 | 31884 |
| YP_009208130.1 | NC_028901_p44 | hypothetical protein | phrog_9839 | unknown function | unknown function | -1 | 33152 | 33478 |
| YP_009208117.1 | NC_028901_p31 | hypothetical protein | phrog_145 | portal protein | head and packaging | -1 | 25165 | 26685 |
| YP_009208097.1 | NC_028901_p11 | hypothetical protein | phrog_4281 | unknown function | unknown function | 1 | 6886 | 7107 |
| YP_009208120.1 | NC_028901_p34 | hypothetical protein | phrog_20931 | unknown function | unknown function | -1 | 28750 | 28962 |
| YP_009208114.1 | NC_028901_p28 | hypothetical protein | phrog_1965 | unknown function | unknown function | 1 | 22866 | 23630 |
| YP_009208108.1 | NC_028901_p22 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | -1 | 19200 | 19793 |
| YP_009208102.1 | NC_028901_p16 | Phage minor tail protein L | phrog_18 | minor tail protein | tail | -1 | 12800 | 13588 |
| YP_009208141.1 | NC_028901_p55 | DNA polymerase I, thermostable | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 40911 | 43202 |
| YP_009208115.1 | NC_028901_p29 | hypothetical protein | phrog_2536 | Rz-like spanin | lysis | -1 | 23756 | 24085 |
| YP_009208099.1 | NC_028901_p13 | hypothetical protein | phrog_31 | central tail fiber J | tail | -1 | 8102 | 11452 |
| YP_009208111.1 | NC_028901_p25 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | -1 | 20256 | 20756 |
| YP_009208121.1 | NC_028901_p35 | Calcineurin-like phosphoesterase superfamily domain protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | -1 | 28959 | 30101 |
| YP_009208095.1 | NC_028901_p9 | hypothetical protein | phrog_10558 | unknown function | unknown function | 1 | 4517 | 5092 |
| YP_009208125.1 | NC_028901_p39 | hypothetical protein | phrog_2359 | holin | lysis | -1 | 31194 | 31532 |
| YP_009208098.1 | NC_028901_p12 | hypothetical protein | phrog_1265 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 7110 | 8075 |
| YP_009208142.1 | NC_028901_p56 | hypothetical protein | phrog_1222 | unknown function | unknown function | 1 | 43207 | 43398 |
| YP_009208112.1 | NC_028901_p26 | hypothetical protein | phrog_247 | major head protein | head and packaging | -1 | 20815 | 21915 |
| YP_009208133.1 | NC_028901_p47 | hypothetical protein | phrog_3127 | unknown function | unknown function | 1 | 37020 | 37538 |
| YP_009208104.1 | NC_028901_p18 | Prophage tail length tape measure protein | phrog_24 | tail length tape measure protein | tail | -1 | 14220 | 16862 |
| YP_009208089.1 | NC_028901_p3 | hypothetical protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 1881 | 2204 |
| YP_009208144.1 | NC_028901_p58 | hypothetical protein | phrog_5558 | Lar-like restriction alleviation protein | moron, auxiliary metabolic gene and host takeover | 1 | 43714 | 43887 |
| YP_009208135.1 | NC_028901_p49 | hypothetical protein | phrog_4965 | unknown function | unknown function | 1 | 37717 | 37968 |
| YP_009208101.1 | NC_028901_p15 | NlpC/P60 family protein | phrog_30 | minor tail protein | tail | -1 | 12057 | 12797 |
| YP_009208136.1 | NC_028901_p50 | hypothetical protein | phrog_9934 | unknown function | unknown function | 1 | 37968 | 38147 |
| YP_009208087.1 | NC_028901_p1 | hypothetical protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 77 | 1192 |
| YP_009208131.1 | NC_028901_p45 | hypothetical protein | phrog_3228 | replicative helicase-primase | DNA, RNA and nucleotide metabolism | -1 | 34013 | 36277 |
| YP_009208140.1 | NC_028901_p54 | hypothetical protein | phrog_10102 | unknown function | unknown function | 1 | 40744 | 40914 |
| YP_009208110.1 | NC_028901_p24 | hypothetical protein | phrog_11158 | unknown function | unknown function | -1 | 20135 | 20254 |
| YP_009208143.1 | NC_028901_p57 | VRR-NUC domain protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43395 | 43673 |
| YP_009208092.1 | NC_028901_p6 | hypothetical protein | phrog_10685 | unknown function | unknown function | 1 | 3202 | 3423 |
| YP_009208119.1 | NC_028901_p33 | hypothetical protein | phrog_3064 | terminase | head and packaging | -1 | 28081 | 28632 |
| YP_009208105.1 | NC_028901_p19 | hypothetical protein | phrog_569 | tail length tape measure protein | tail | -1 | 17560 | 17922 |
| YP_009208088.1 | NC_028901_p2 | hypothetical protein | phrog_757 | DNA methyltransferase | other | 1 | 1189 | 1884 |
| YP_009208139.1 | NC_028901_p53 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 39903 | 40685 |
| YP_009208109.1 | NC_028901_p23 | hypothetical protein | phrog_161 | head closure Hc1 | connector | -1 | 19795 | 20148 |
| YP_009208113.1 | NC_028901_p27 | hypothetical protein | phrog_206 | head scaffolding protein | head and packaging | -1 | 22013 | 22717 |
| YP_009208138.1 | NC_028901_p52 | hypothetical protein | phrog_11211 | unknown function | unknown function | 1 | 39570 | 39812 |
| YP_009208122.1 | NC_028901_p36 | hypothetical protein | phrog_11068 | unknown function | unknown function | -1 | 30339 | 30506 |
| YP_009208134.1 | NC_028901_p48 | hypothetical protein | phrog_15754 | unknown function | unknown function | 1 | 37555 | 37668 |
| YP_009208093.1 | NC_028901_p7 | hypothetical protein | phrog_415 | polynucleotide kinase | other | 1 | 3420 | 3890 |
| YP_009208090.1 | NC_028901_p4 | hypothetical protein | phrog_10530 | DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 2285 | 2749 |
| YP_009208106.1 | NC_028901_p20 | Phage tail protein | phrog_584 | major tail protein | tail | -1 | 17992 | 18717 |
| YP_009208116.1 | NC_028901_p30 | hypothetical protein | phrog_241 | head morphogenesis | head and packaging | -1 | 24078 | 25181 |
| YP_009208118.1 | NC_028901_p32 | Terminase-like family protein | phrog_2 | terminase large subunit | head and packaging | -1 | 26696 | 28081 |
| YP_009208091.1 | NC_028901_p5 | DNA N-6-adenine-methyltransferase (Dam) | phrog_111 | DNA methyltransferase | other | 1 | 2736 | 3245 |
| YP_009208137.1 | NC_028901_p51 | PD-(D/E)XK nuclease superfamily protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 38147 | 39577 |
| YP_009208100.1 | NC_028901_p14 | Bacteriophage lambda tail assembly protein I | phrog_32 | tail assembly protein | tail | -1 | 11449 | 12066 |
| YP_009208124.1 | NC_028901_p38 | hypothetical protein | phrog_2508 | holin | lysis | -1 | 31001 | 31246 |