| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028903 |
Definition |
Escherichia phage 172-1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Kuravirus. |
DB of origin |
REFSEQ |
Length |
77266 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
130 |
%GC |
41.98 |
Number of singletons |
2 |
Number of paralogs |
9 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009208150.1 | NC_028903_p2 | hypothetical protein | phrog_6570 | unknown function | unknown function | -1 | 719 | 937 |
| YP_009208232.1 | NC_028903_p84 | hypothetical protein | phrog_9296 | unknown function | unknown function | -1 | 54991 | 55170 |
| YP_009208212.1 | NC_028903_p64 | hypothetical protein | phrog_1312 | unknown function | unknown function | -1 | 47668 | 47796 |
| YP_009208185.1 | NC_028903_p37 | hypothetical protein | phrog_1265 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 29869 | 30903 |
| YP_009208155.1 | NC_028903_p7 | DNA helicase | phrog_12154 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 1866 | 2162 |
| YP_009208158.1 | NC_028903_p10 | hypothetical protein | phrog_38462 | unknown function | unknown function | -1 | 3238 | 3360 |
| YP_009208210.1 | NC_028903_p62 | hypothetical protein | phrog_12230 | unknown function | unknown function | -1 | 47315 | 47491 |
| YP_009208197.1 | NC_028903_p49 | dNMP kinase | phrog_26149 | deoxynucleoside monophosphate kinase | other | -1 | 41977 | 42504 |
| YP_009208211.1 | NC_028903_p63 | hypothetical protein | phrog_10640 | unknown function | unknown function | -1 | 47501 | 47671 |
| YP_009208174.1 | NC_028903_p26 | capsid and scaffold protein | phrog_9013 | head scaffolding protein | head and packaging | 1 | 15798 | 16883 |
| YP_009208204.1 | NC_028903_p56 | phosphohydrolase | phrog_547 | phosphoesterase | other | -1 | 45381 | 45881 |
| YP_009208274.1 | NC_028903_p126 | hypothetical protein | phrog_8294 | unknown function | unknown function | -1 | 76032 | 76193 |
| YP_009208175.1 | NC_028903_p27 | capsid and scaffold protein | phrog_1328 | major head protein | head and packaging | 1 | 16925 | 17986 |
| YP_009208240.1 | NC_028903_p92 | hypothetical protein | phrog_12715 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 57553 | 58908 |
| YP_009208228.1 | NC_028903_p80 | hypothetical protein | phrog_4939 | unknown function | unknown function | -1 | 54127 | 54330 |
| YP_009208263.1 | NC_028903_p115 | hypothetical protein | phrog_7832 | unknown function | unknown function | -1 | 73021 | 73269 |
| YP_009208276.1 | NC_028903_p128 | hypothetical protein | phrog_10911 | unknown function | unknown function | -1 | 76566 | 76790 |
| YP_009208225.1 | NC_028903_p77 | hypothetical protein | phrog_4452 | anti-restriction nuclease | DNA, RNA and nucleotide metabolism | -1 | 53075 | 53266 |
| YP_009208259.1 | NC_028903_p111 | hypothetical protein | phrog_6662 | unknown function | unknown function | -1 | 72066 | 72299 |
| YP_009208177.1 | NC_028903_p29 | hypothetical protein | phrog_2941 | virion structural protein | head and packaging | 1 | 18613 | 19365 |
| YP_009208201.1 | NC_028903_p53 | hypothetical protein | phrog_1152 | Rz-like spanin | lysis | -1 | 43679 | 44029 |
| YP_009208222.1 | NC_028903_p74 | hypothetical protein | phrog_30988 | unknown function | unknown function | -1 | 52392 | 52592 |
| YP_009208248.1 | NC_028903_p100 | hypothetical protein | phrog_13464 | unknown function | unknown function | -1 | 63593 | 63817 |
| YP_009208244.1 | NC_028903_p96 | hypothetical protein | phrog_2520 | gamma-glutamyl cyclotransferase | moron, auxiliary metabolic gene and host takeover | -1 | 61468 | 61887 |
| YP_009208234.1 | NC_028903_p86 | hypothetical protein | phrog_10984 | unknown function | unknown function | -1 | 55788 | 56117 |
| YP_009208181.1 | NC_028903_p33 | lysin | phrog_7 | endolysin | lysis | 1 | 24521 | 25012 |
| YP_009208178.1 | NC_028903_p30 | tail fibers protein | phrog_10305 | tail fiber protein | tail | 1 | 19375 | 21933 |
| YP_009208167.1 | NC_028903_p19 | hypothetical protein | phrog_21410 | unknown function | unknown function | -1 | 8364 | 8855 |
| YP_009208199.1 | NC_028903_p51 | hypothetical protein | phrog_1740 | RNA polymerase sigma factor | transcription regulation | -1 | 42890 | 43534 |
| YP_009208217.1 | NC_028903_p69 | hypothetical protein | phrog_6814 | unknown function | unknown function | -1 | 50499 | 50774 |
| YP_009208182.1 | NC_028903_p34 | baseplate protein | phrog_6465 | tail protein | tail | 1 | 25025 | 25828 |
| YP_009208255.1 | NC_028903_p107 | hypothetical protein | phrog_13063 | unknown function | unknown function | -1 | 69653 | 70846 |
| YP_009208203.1 | NC_028903_p55 | hypothetical protein | phrog_14248 | unknown function | unknown function | -1 | 45251 | 45412 |
| YP_009208200.1 | NC_028903_p52 | hypothetical protein | phrog_2425 | unknown function | unknown function | -1 | 43534 | 43707 |
| YP_009208173.1 | NC_028903_p25 | hypothetical protein | phrog_12967 | unknown function | unknown function | 1 | 15562 | 15798 |
| YP_009208184.1 | NC_028903_p36 | tail fiber protein | phrog_16534 | tail fiber protein | tail | 1 | 28899 | 29867 |
| YP_009208241.1 | NC_028903_p93 | DNA polymerase | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 58910 | 59464 |
| YP_009208230.1 | NC_028903_p82 | hypothetical protein | phrog_19504 | unknown function | unknown function | -1 | 54607 | 54783 |
| YP_009208236.1 | NC_028903_p88 | hypothetical protein | phrog_4939 | unknown function | unknown function | -1 | 56400 | 56609 |
| YP_009208216.1 | NC_028903_p68 | hypothetical protein | phrog_17007 | unknown function | unknown function | -1 | 50337 | 50495 |
| YP_009208154.1 | NC_028903_p6 | hypothetical protein | phrog_9955 | unknown function | unknown function | -1 | 1643 | 1876 |
| YP_009208205.1 | NC_028903_p57 | homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 45891 | 46364 |
| YP_009208218.1 | NC_028903_p70 | autotransporter adhesin | phrog_6814 | unknown function | unknown function | -1 | 50776 | 51027 |
| YP_009208243.1 | NC_028903_p95 | hypothetical protein | phrog_10819 | unknown function | unknown function | -1 | 61275 | 61427 |
| YP_009208172.1 | NC_028903_p24 | portal protein | phrog_1216 | portal protein | head and packaging | 1 | 13309 | 15552 |
| YP_009208169.1 | NC_028903_p21 | oligopeptide ABC transporter | phrog_12176 | ABC transporter | moron, auxiliary metabolic gene and host takeover | 1 | 10452 | 11015 |
| YP_009208258.1 | NC_028903_p110 | hypothetical protein | phrog_944 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 71602 | 72066 |
| YP_009208186.1 | NC_028903_p38 | lytic transglycosylase | phrog_12507 | transglycosylase | other | 1 | 30913 | 31695 |
| YP_009208250.1 | NC_028903_p102 | hypothetical protein | phrog_4736 | L-glutamine-D-fructose-6-phosphate aminotransferase | other | -1 | 64034 | 65995 |
| YP_009208256.1 | NC_028903_p108 | hypothetical protein | phrog_11370 | unknown function | unknown function | -1 | 70858 | 71220 |
| YP_009208238.1 | NC_028903_p90 | hypothetical protein | phrog_2347 | unknown function | unknown function | -1 | 56803 | 57009 |
| YP_009208196.1 | NC_028903_p48 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 41157 | 41975 |
| YP_009208165.1 | NC_028903_p17 | hypothetical protein | singleton | unknown function | unknown function | -1 | 7863 | 7979 |
| YP_009208272.1 | NC_028903_p124 | hypothetical protein | phrog_23590 | unknown function | unknown function | -1 | 75487 | 75756 |
| YP_009208193.1 | NC_028903_p45 | hypothetical protein | phrog_3715 | unknown function | unknown function | -1 | 40356 | 40610 |
| YP_009208192.1 | NC_028903_p44 | hypothetical protein | phrog_653 | unknown function | unknown function | -1 | 40186 | 40347 |
| YP_009208220.1 | NC_028903_p72 | phosphate starvation-inducible protein PhoH | phrog_170 | PhoH-like phosphate starvation-inducible | other | -1 | 51476 | 52213 |
| YP_009208206.1 | NC_028903_p58 | hypothetical protein | phrog_11811 | unknown function | unknown function | -1 | 46361 | 46561 |
| YP_009208195.1 | NC_028903_p47 | hypothetical protein | phrog_10643 | unknown function | unknown function | -1 | 40964 | 41143 |
| YP_009208246.1 | NC_028903_p98 | hypothetical protein | phrog_8339 | unknown function | unknown function | -1 | 62139 | 62381 |
| YP_009208163.1 | NC_028903_p15 | hypothetical protein | phrog_13018 | unknown function | unknown function | -1 | 4754 | 5653 |
| YP_009208190.1 | NC_028903_p42 | erythrocyte binding protein 1 | phrog_14629 | unknown function | unknown function | 1 | 35485 | 39906 |
| YP_009208179.1 | NC_028903_p31 | tail fibers protein | phrog_6921 | tail fiber protein | tail | 1 | 21974 | 24181 |
| YP_009208233.1 | NC_028903_p85 | integrase | phrog_3636 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 55232 | 55795 |
| YP_009208164.1 | NC_028903_p16 | terminase | phrog_13168 | terminase | head and packaging | -1 | 7511 | 7876 |
| YP_009208270.1 | NC_028903_p122 | hypothetical protein | phrog_13462 | unknown function | unknown function | -1 | 74884 | 75081 |
| YP_009208260.1 | NC_028903_p112 | hypothetical protein | phrog_14557 | unknown function | unknown function | -1 | 72406 | 72522 |
| YP_009208252.1 | NC_028903_p104 | hypothetical protein | phrog_4877 | unknown function | unknown function | -1 | 67245 | 67862 |
| YP_009208157.1 | NC_028903_p9 | helix-turn-helix motif protein | phrog_2339 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 2865 | 3182 |
| YP_009208183.1 | NC_028903_p35 | N-acetylmuramoyl-L-alanine amidase | phrog_14417 | tail fiber protein; host specificity | tail | 1 | 25838 | 28855 |
| YP_009208249.1 | NC_028903_p101 | hypothetical protein | phrog_9477 | unknown function | unknown function | -1 | 63798 | 64031 |
| YP_009208247.1 | NC_028903_p99 | hypothetical protein | phrog_2599 | ribosomal protein S6 glutaminyl transferase | moron, auxiliary metabolic gene and host takeover | -1 | 62394 | 63590 |
| YP_009208224.1 | NC_028903_p76 | hypothetical protein | phrog_15951 | unknown function | unknown function | -1 | 52909 | 53094 |
| YP_009208239.1 | NC_028903_p91 | deoxycytidine triphosphate deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | -1 | 57010 | 57543 |
| YP_009208277.1 | NC_028903_p129 | hypothetical protein | phrog_18461 | unknown function | unknown function | -1 | 76787 | 76963 |
| YP_009208208.1 | NC_028903_p60 | hypothetical protein | phrog_10314 | unknown function | unknown function | -1 | 46711 | 46878 |
| YP_009208265.1 | NC_028903_p117 | transcriptional regulator | phrog_323 | transcriptional regulator, D5-like | transcription regulation | -1 | 73526 | 73837 |
| YP_009208191.1 | NC_028903_p43 | hypothetical protein | phrog_2140 | unknown function | unknown function | -1 | 39950 | 40069 |
| YP_009208160.1 | NC_028903_p12 | hypothetical protein | phrog_14815 | unknown function | unknown function | -1 | 3997 | 4206 |
| YP_009208149.1 | NC_028903_p1 | hypothetical protein | phrog_13305 | unknown function | unknown function | -1 | 221 | 361 |
| YP_009208278.1 | NC_028903_p130 | hypothetical protein | phrog_9565 | unknown function | unknown function | -1 | 77045 | 77254 |
| YP_009208227.1 | NC_028903_p79 | thymidylate synthase thyX | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 53455 | 54111 |
| YP_009208237.1 | NC_028903_p89 | hypothetical protein | phrog_4939 | unknown function | unknown function | -1 | 56609 | 56806 |
| YP_009208162.1 | NC_028903_p14 | hypothetical protein | phrog_12675 | unknown function | unknown function | -1 | 4424 | 4642 |
| YP_009208151.1 | NC_028903_p3 | hypothetical protein | phrog_33163 | unknown function | unknown function | -1 | 948 | 1160 |
| YP_009208209.1 | NC_028903_p61 | hypothetical protein | phrog_4919 | unknown function | unknown function | -1 | 46875 | 47267 |
| YP_009208194.1 | NC_028903_p46 | terminase small subunit | phrog_3106 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 40576 | 40977 |
| YP_009208166.1 | NC_028903_p18 | DNA polymerase B region protein | phrog_14176 | polymerase | DNA, RNA and nucleotide metabolism | -1 | 8083 | 8334 |
| YP_009208229.1 | NC_028903_p81 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 54333 | 54605 |
| YP_009208273.1 | NC_028903_p125 | hypothetical protein | phrog_13426 | unknown function | unknown function | -1 | 75814 | 76023 |
| YP_009208213.1 | NC_028903_p65 | hypothetical protein | phrog_2430 | unknown function | unknown function | -1 | 47852 | 48043 |
| YP_009208271.1 | NC_028903_p123 | hypothetical protein | phrog_4281 | unknown function | unknown function | -1 | 75083 | 75382 |
| YP_009208251.1 | NC_028903_p103 | hypothetical protein | phrog_7469 | amidoligase enzyme | other | -1 | 66145 | 67248 |
| YP_009208180.1 | NC_028903_p32 | hypothetical protein | phrog_11161 | holin | lysis | 1 | 24274 | 24492 |
| YP_009208242.1 | NC_028903_p94 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | -1 | 59458 | 61248 |
| YP_009208268.1 | NC_028903_p120 | hypothetical protein | phrog_13157 | unknown function | unknown function | -1 | 74470 | 74643 |
| YP_009208198.1 | NC_028903_p50 | hypothetical protein | phrog_289 | GTP-binding domain | other | -1 | 42501 | 42893 |
| YP_009208153.1 | NC_028903_p5 | hypothetical protein | phrog_16423 | unknown function | unknown function | -1 | 1404 | 1640 |
| YP_009208235.1 | NC_028903_p87 | hypothetical protein | phrog_4939 | unknown function | unknown function | -1 | 56191 | 56400 |
| YP_009208171.1 | NC_028903_p23 | DNA packaging protein | phrog_2 | terminase large subunit | head and packaging | 1 | 11707 | 13248 |
| YP_009208262.1 | NC_028903_p114 | hypothetical protein | phrog_7431 | unknown function | unknown function | -1 | 72776 | 73021 |
| YP_009208152.1 | NC_028903_p4 | hypothetical protein | phrog_9955 | unknown function | unknown function | -1 | 1163 | 1414 |
| YP_009208269.1 | NC_028903_p121 | hypothetical protein | phrog_6570 | unknown function | unknown function | -1 | 74653 | 74874 |
| YP_009208264.1 | NC_028903_p116 | hypothetical protein | phrog_7832 | unknown function | unknown function | -1 | 73266 | 73517 |
| YP_009208219.1 | NC_028903_p71 | hypothetical protein | phrog_4590 | unknown function | unknown function | -1 | 51096 | 51419 |
| YP_009208156.1 | NC_028903_p8 | hypothetical protein | phrog_12974 | unknown function | unknown function | -1 | 2362 | 2751 |
| YP_009208223.1 | NC_028903_p75 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52589 | 52801 |
| YP_009208226.1 | NC_028903_p78 | hypothetical protein | phrog_16989 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 53321 | 53452 |
| YP_009208266.1 | NC_028903_p118 | hypothetical protein | phrog_29104 | unknown function | unknown function | -1 | 74129 | 74314 |
| YP_009208215.1 | NC_028903_p67 | hypothetical protein | phrog_11427 | unknown function | unknown function | -1 | 49913 | 50335 |
| YP_009208188.1 | NC_028903_p40 | hypothetical protein | phrog_4287 | DNA ejection protein | DNA, RNA and nucleotide metabolism | 1 | 32780 | 33748 |
| YP_009208159.1 | NC_028903_p11 | hypothetical protein | phrog_11641 | unknown function | unknown function | -1 | 3484 | 3927 |
| YP_009208207.1 | NC_028903_p59 | hypothetical protein | phrog_3955 | unknown function | unknown function | -1 | 46571 | 46714 |
| YP_009208170.1 | NC_028903_p22 | hypothetical protein | phrog_8771 | unknown function | unknown function | 1 | 11072 | 11545 |
| YP_009208202.1 | NC_028903_p54 | hypothetical protein | phrog_6599 | unknown function | unknown function | -1 | 44088 | 44834 |
| YP_009208168.1 | NC_028903_p20 | hypothetical protein | phrog_12698 | unknown function | unknown function | 1 | 10205 | 10459 |
| YP_009208245.1 | NC_028903_p97 | hypothetical protein | phrog_8591 | unknown function | unknown function | -1 | 61957 | 62142 |
| YP_009208187.1 | NC_028903_p39 | hypothetical protein | phrog_4287 | DNA ejection protein | DNA, RNA and nucleotide metabolism | 1 | 31715 | 32767 |
| YP_009208267.1 | NC_028903_p119 | hypothetical protein | phrog_9481 | unknown function | unknown function | -1 | 74330 | 74461 |
| YP_009208257.1 | NC_028903_p109 | hypothetical protein | phrog_13048 | unknown function | unknown function | -1 | 71223 | 71375 |
| YP_009208254.1 | NC_028903_p106 | hypothetical protein | phrog_13102 | unknown function | unknown function | -1 | 68671 | 69642 |
| YP_009208176.1 | NC_028903_p28 | hypothetical protein | phrog_13745 | Ig domain containing protein | other | 1 | 18070 | 18513 |
| YP_009208161.1 | NC_028903_p13 | hypothetical protein | phrog_6887 | unknown function | unknown function | -1 | 4203 | 4427 |
| YP_009208214.1 | NC_028903_p66 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 48052 | 49896 |
| YP_009208231.1 | NC_028903_p83 | hypothetical protein | phrog_9296 | unknown function | unknown function | -1 | 54796 | 54981 |
| YP_009208261.1 | NC_028903_p113 | hypothetical protein | phrog_12612 | unknown function | unknown function | -1 | 72531 | 72773 |
| YP_009208221.1 | NC_028903_p73 | hypothetical protein | phrog_14369 | unknown function | unknown function | -1 | 52210 | 52407 |
| YP_009208275.1 | NC_028903_p127 | hypothetical protein | phrog_1972 | unknown function | unknown function | -1 | 76318 | 76569 |
| YP_009208253.1 | NC_028903_p105 | hypothetical protein | phrog_3815 | COOH.NH2 ligase | other | -1 | 67872 | 68678 |
| YP_009208189.1 | NC_028903_p41 | hypothetical protein | phrog_12130 | unknown function | unknown function | 1 | 33762 | 35417 |