Genomic map of Escherichia phage 172-1 (NC_028903)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028903
Definition
Escherichia phage 172-1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Kuravirus.
DB of origin
REFSEQ
Length
77266
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
130
%GC
41.98
Number of singletons
2
Number of paralogs
9

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009208150.1 NC_028903_p2 hypothetical protein phrog_6570 unknown function unknown function -1 719 937
YP_009208232.1 NC_028903_p84 hypothetical protein phrog_9296 unknown function unknown function -1 54991 55170
YP_009208212.1 NC_028903_p64 hypothetical protein phrog_1312 unknown function unknown function -1 47668 47796
YP_009208185.1 NC_028903_p37 hypothetical protein phrog_1265 membrane protein moron, auxiliary metabolic gene and host takeover 1 29869 30903
YP_009208155.1 NC_028903_p7 DNA helicase phrog_12154 DNA helicase DNA, RNA and nucleotide metabolism -1 1866 2162
YP_009208158.1 NC_028903_p10 hypothetical protein phrog_38462 unknown function unknown function -1 3238 3360
YP_009208210.1 NC_028903_p62 hypothetical protein phrog_12230 unknown function unknown function -1 47315 47491
YP_009208197.1 NC_028903_p49 dNMP kinase phrog_26149 deoxynucleoside monophosphate kinase other -1 41977 42504
YP_009208211.1 NC_028903_p63 hypothetical protein phrog_10640 unknown function unknown function -1 47501 47671
YP_009208174.1 NC_028903_p26 capsid and scaffold protein phrog_9013 head scaffolding protein head and packaging 1 15798 16883
YP_009208204.1 NC_028903_p56 phosphohydrolase phrog_547 phosphoesterase other -1 45381 45881
YP_009208274.1 NC_028903_p126 hypothetical protein phrog_8294 unknown function unknown function -1 76032 76193
YP_009208175.1 NC_028903_p27 capsid and scaffold protein phrog_1328 major head protein head and packaging 1 16925 17986
YP_009208240.1 NC_028903_p92 hypothetical protein phrog_12715 nucleotidyltransferase DNA, RNA and nucleotide metabolism -1 57553 58908
YP_009208228.1 NC_028903_p80 hypothetical protein phrog_4939 unknown function unknown function -1 54127 54330
YP_009208263.1 NC_028903_p115 hypothetical protein phrog_7832 unknown function unknown function -1 73021 73269
YP_009208276.1 NC_028903_p128 hypothetical protein phrog_10911 unknown function unknown function -1 76566 76790
YP_009208225.1 NC_028903_p77 hypothetical protein phrog_4452 anti-restriction nuclease DNA, RNA and nucleotide metabolism -1 53075 53266
YP_009208259.1 NC_028903_p111 hypothetical protein phrog_6662 unknown function unknown function -1 72066 72299
YP_009208177.1 NC_028903_p29 hypothetical protein phrog_2941 virion structural protein head and packaging 1 18613 19365
YP_009208201.1 NC_028903_p53 hypothetical protein phrog_1152 Rz-like spanin lysis -1 43679 44029
YP_009208222.1 NC_028903_p74 hypothetical protein phrog_30988 unknown function unknown function -1 52392 52592
YP_009208248.1 NC_028903_p100 hypothetical protein phrog_13464 unknown function unknown function -1 63593 63817
YP_009208244.1 NC_028903_p96 hypothetical protein phrog_2520 gamma-glutamyl cyclotransferase moron, auxiliary metabolic gene and host takeover -1 61468 61887
YP_009208234.1 NC_028903_p86 hypothetical protein phrog_10984 unknown function unknown function -1 55788 56117
YP_009208181.1 NC_028903_p33 lysin phrog_7 endolysin lysis 1 24521 25012
YP_009208178.1 NC_028903_p30 tail fibers protein phrog_10305 tail fiber protein tail 1 19375 21933
YP_009208167.1 NC_028903_p19 hypothetical protein phrog_21410 unknown function unknown function -1 8364 8855
YP_009208199.1 NC_028903_p51 hypothetical protein phrog_1740 RNA polymerase sigma factor transcription regulation -1 42890 43534
YP_009208217.1 NC_028903_p69 hypothetical protein phrog_6814 unknown function unknown function -1 50499 50774
YP_009208182.1 NC_028903_p34 baseplate protein phrog_6465 tail protein tail 1 25025 25828
YP_009208255.1 NC_028903_p107 hypothetical protein phrog_13063 unknown function unknown function -1 69653 70846
YP_009208203.1 NC_028903_p55 hypothetical protein phrog_14248 unknown function unknown function -1 45251 45412
YP_009208200.1 NC_028903_p52 hypothetical protein phrog_2425 unknown function unknown function -1 43534 43707
YP_009208173.1 NC_028903_p25 hypothetical protein phrog_12967 unknown function unknown function 1 15562 15798
YP_009208184.1 NC_028903_p36 tail fiber protein phrog_16534 tail fiber protein tail 1 28899 29867
YP_009208241.1 NC_028903_p93 DNA polymerase phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 58910 59464
YP_009208230.1 NC_028903_p82 hypothetical protein phrog_19504 unknown function unknown function -1 54607 54783
YP_009208236.1 NC_028903_p88 hypothetical protein phrog_4939 unknown function unknown function -1 56400 56609
YP_009208216.1 NC_028903_p68 hypothetical protein phrog_17007 unknown function unknown function -1 50337 50495
YP_009208154.1 NC_028903_p6 hypothetical protein phrog_9955 unknown function unknown function -1 1643 1876
YP_009208205.1 NC_028903_p57 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 45891 46364
YP_009208218.1 NC_028903_p70 autotransporter adhesin phrog_6814 unknown function unknown function -1 50776 51027
YP_009208243.1 NC_028903_p95 hypothetical protein phrog_10819 unknown function unknown function -1 61275 61427
YP_009208172.1 NC_028903_p24 portal protein phrog_1216 portal protein head and packaging 1 13309 15552
YP_009208169.1 NC_028903_p21 oligopeptide ABC transporter phrog_12176 ABC transporter moron, auxiliary metabolic gene and host takeover 1 10452 11015
YP_009208258.1 NC_028903_p110 hypothetical protein phrog_944 membrane protein moron, auxiliary metabolic gene and host takeover -1 71602 72066
YP_009208186.1 NC_028903_p38 lytic transglycosylase phrog_12507 transglycosylase other 1 30913 31695
YP_009208250.1 NC_028903_p102 hypothetical protein phrog_4736 L-glutamine-D-fructose-6-phosphate aminotransferase other -1 64034 65995
YP_009208256.1 NC_028903_p108 hypothetical protein phrog_11370 unknown function unknown function -1 70858 71220
YP_009208238.1 NC_028903_p90 hypothetical protein phrog_2347 unknown function unknown function -1 56803 57009
YP_009208196.1 NC_028903_p48 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 41157 41975
YP_009208165.1 NC_028903_p17 hypothetical protein singleton unknown function unknown function -1 7863 7979
YP_009208272.1 NC_028903_p124 hypothetical protein phrog_23590 unknown function unknown function -1 75487 75756
YP_009208193.1 NC_028903_p45 hypothetical protein phrog_3715 unknown function unknown function -1 40356 40610
YP_009208192.1 NC_028903_p44 hypothetical protein phrog_653 unknown function unknown function -1 40186 40347
YP_009208220.1 NC_028903_p72 phosphate starvation-inducible protein PhoH phrog_170 PhoH-like phosphate starvation-inducible other -1 51476 52213
YP_009208206.1 NC_028903_p58 hypothetical protein phrog_11811 unknown function unknown function -1 46361 46561
YP_009208195.1 NC_028903_p47 hypothetical protein phrog_10643 unknown function unknown function -1 40964 41143
YP_009208246.1 NC_028903_p98 hypothetical protein phrog_8339 unknown function unknown function -1 62139 62381
YP_009208163.1 NC_028903_p15 hypothetical protein phrog_13018 unknown function unknown function -1 4754 5653
YP_009208190.1 NC_028903_p42 erythrocyte binding protein 1 phrog_14629 unknown function unknown function 1 35485 39906
YP_009208179.1 NC_028903_p31 tail fibers protein phrog_6921 tail fiber protein tail 1 21974 24181
YP_009208233.1 NC_028903_p85 integrase phrog_3636 DNA binding protein DNA, RNA and nucleotide metabolism -1 55232 55795
YP_009208164.1 NC_028903_p16 terminase phrog_13168 terminase head and packaging -1 7511 7876
YP_009208270.1 NC_028903_p122 hypothetical protein phrog_13462 unknown function unknown function -1 74884 75081
YP_009208260.1 NC_028903_p112 hypothetical protein phrog_14557 unknown function unknown function -1 72406 72522
YP_009208252.1 NC_028903_p104 hypothetical protein phrog_4877 unknown function unknown function -1 67245 67862
YP_009208157.1 NC_028903_p9 helix-turn-helix motif protein phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 2865 3182
YP_009208183.1 NC_028903_p35 N-acetylmuramoyl-L-alanine amidase phrog_14417 tail fiber protein; host specificity tail 1 25838 28855
YP_009208249.1 NC_028903_p101 hypothetical protein phrog_9477 unknown function unknown function -1 63798 64031
YP_009208247.1 NC_028903_p99 hypothetical protein phrog_2599 ribosomal protein S6 glutaminyl transferase moron, auxiliary metabolic gene and host takeover -1 62394 63590
YP_009208224.1 NC_028903_p76 hypothetical protein phrog_15951 unknown function unknown function -1 52909 53094
YP_009208239.1 NC_028903_p91 deoxycytidine triphosphate deaminase phrog_1663 dCTP deaminase DNA, RNA and nucleotide metabolism -1 57010 57543
YP_009208277.1 NC_028903_p129 hypothetical protein phrog_18461 unknown function unknown function -1 76787 76963
YP_009208208.1 NC_028903_p60 hypothetical protein phrog_10314 unknown function unknown function -1 46711 46878
YP_009208265.1 NC_028903_p117 transcriptional regulator phrog_323 transcriptional regulator, D5-like transcription regulation -1 73526 73837
YP_009208191.1 NC_028903_p43 hypothetical protein phrog_2140 unknown function unknown function -1 39950 40069
YP_009208160.1 NC_028903_p12 hypothetical protein phrog_14815 unknown function unknown function -1 3997 4206
YP_009208149.1 NC_028903_p1 hypothetical protein phrog_13305 unknown function unknown function -1 221 361
YP_009208278.1 NC_028903_p130 hypothetical protein phrog_9565 unknown function unknown function -1 77045 77254
YP_009208227.1 NC_028903_p79 thymidylate synthase thyX phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 53455 54111
YP_009208237.1 NC_028903_p89 hypothetical protein phrog_4939 unknown function unknown function -1 56609 56806
YP_009208162.1 NC_028903_p14 hypothetical protein phrog_12675 unknown function unknown function -1 4424 4642
YP_009208151.1 NC_028903_p3 hypothetical protein phrog_33163 unknown function unknown function -1 948 1160
YP_009208209.1 NC_028903_p61 hypothetical protein phrog_4919 unknown function unknown function -1 46875 47267
YP_009208194.1 NC_028903_p46 terminase small subunit phrog_3106 HNH endonuclease DNA, RNA and nucleotide metabolism -1 40576 40977
YP_009208166.1 NC_028903_p18 DNA polymerase B region protein phrog_14176 polymerase DNA, RNA and nucleotide metabolism -1 8083 8334
YP_009208229.1 NC_028903_p81 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 54333 54605
YP_009208273.1 NC_028903_p125 hypothetical protein phrog_13426 unknown function unknown function -1 75814 76023
YP_009208213.1 NC_028903_p65 hypothetical protein phrog_2430 unknown function unknown function -1 47852 48043
YP_009208271.1 NC_028903_p123 hypothetical protein phrog_4281 unknown function unknown function -1 75083 75382
YP_009208251.1 NC_028903_p103 hypothetical protein phrog_7469 amidoligase enzyme other -1 66145 67248
YP_009208180.1 NC_028903_p32 hypothetical protein phrog_11161 holin lysis 1 24274 24492
YP_009208242.1 NC_028903_p94 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 59458 61248
YP_009208268.1 NC_028903_p120 hypothetical protein phrog_13157 unknown function unknown function -1 74470 74643
YP_009208198.1 NC_028903_p50 hypothetical protein phrog_289 GTP-binding domain other -1 42501 42893
YP_009208153.1 NC_028903_p5 hypothetical protein phrog_16423 unknown function unknown function -1 1404 1640
YP_009208235.1 NC_028903_p87 hypothetical protein phrog_4939 unknown function unknown function -1 56191 56400
YP_009208171.1 NC_028903_p23 DNA packaging protein phrog_2 terminase large subunit head and packaging 1 11707 13248
YP_009208262.1 NC_028903_p114 hypothetical protein phrog_7431 unknown function unknown function -1 72776 73021
YP_009208152.1 NC_028903_p4 hypothetical protein phrog_9955 unknown function unknown function -1 1163 1414
YP_009208269.1 NC_028903_p121 hypothetical protein phrog_6570 unknown function unknown function -1 74653 74874
YP_009208264.1 NC_028903_p116 hypothetical protein phrog_7832 unknown function unknown function -1 73266 73517
YP_009208219.1 NC_028903_p71 hypothetical protein phrog_4590 unknown function unknown function -1 51096 51419
YP_009208156.1 NC_028903_p8 hypothetical protein phrog_12974 unknown function unknown function -1 2362 2751
YP_009208223.1 NC_028903_p75 hypothetical protein singleton unknown function unknown function -1 52589 52801
YP_009208226.1 NC_028903_p78 hypothetical protein phrog_16989 membrane protein moron, auxiliary metabolic gene and host takeover -1 53321 53452
YP_009208266.1 NC_028903_p118 hypothetical protein phrog_29104 unknown function unknown function -1 74129 74314
YP_009208215.1 NC_028903_p67 hypothetical protein phrog_11427 unknown function unknown function -1 49913 50335
YP_009208188.1 NC_028903_p40 hypothetical protein phrog_4287 DNA ejection protein DNA, RNA and nucleotide metabolism 1 32780 33748
YP_009208159.1 NC_028903_p11 hypothetical protein phrog_11641 unknown function unknown function -1 3484 3927
YP_009208207.1 NC_028903_p59 hypothetical protein phrog_3955 unknown function unknown function -1 46571 46714
YP_009208170.1 NC_028903_p22 hypothetical protein phrog_8771 unknown function unknown function 1 11072 11545
YP_009208202.1 NC_028903_p54 hypothetical protein phrog_6599 unknown function unknown function -1 44088 44834
YP_009208168.1 NC_028903_p20 hypothetical protein phrog_12698 unknown function unknown function 1 10205 10459
YP_009208245.1 NC_028903_p97 hypothetical protein phrog_8591 unknown function unknown function -1 61957 62142
YP_009208187.1 NC_028903_p39 hypothetical protein phrog_4287 DNA ejection protein DNA, RNA and nucleotide metabolism 1 31715 32767
YP_009208267.1 NC_028903_p119 hypothetical protein phrog_9481 unknown function unknown function -1 74330 74461
YP_009208257.1 NC_028903_p109 hypothetical protein phrog_13048 unknown function unknown function -1 71223 71375
YP_009208254.1 NC_028903_p106 hypothetical protein phrog_13102 unknown function unknown function -1 68671 69642
YP_009208176.1 NC_028903_p28 hypothetical protein phrog_13745 Ig domain containing protein other 1 18070 18513
YP_009208161.1 NC_028903_p13 hypothetical protein phrog_6887 unknown function unknown function -1 4203 4427
YP_009208214.1 NC_028903_p66 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 48052 49896
YP_009208231.1 NC_028903_p83 hypothetical protein phrog_9296 unknown function unknown function -1 54796 54981
YP_009208261.1 NC_028903_p113 hypothetical protein phrog_12612 unknown function unknown function -1 72531 72773
YP_009208221.1 NC_028903_p73 hypothetical protein phrog_14369 unknown function unknown function -1 52210 52407
YP_009208275.1 NC_028903_p127 hypothetical protein phrog_1972 unknown function unknown function -1 76318 76569
YP_009208253.1 NC_028903_p105 hypothetical protein phrog_3815 COOH.NH2 ligase other -1 67872 68678
YP_009208189.1 NC_028903_p41 hypothetical protein phrog_12130 unknown function unknown function 1 33762 35417