Genomic map of Streptomyces phage Amela (NC_028904)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028904
Definition
Streptomyces phage Amela, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Camvirus.
DB of origin
REFSEQ
Length
49452
Host Name
Streptomyces venezuelae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
75
%GC
65.61
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009208290.1 NC_028904_p12 head-tail adaptor phrog_320 head closure Hc1 connector 1 9021 9356
YP_009208326.1 NC_028904_p48 hypothetical protein phrog_15237 unknown function unknown function 1 36312 36461
YP_009208280.1 NC_028904_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 787 1275
YP_009208318.1 NC_028904_p40 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism 1 30514 31179
YP_009208320.1 NC_028904_p42 hypothetical protein phrog_3979 unknown function unknown function 1 31517 31726
YP_009208284.1 NC_028904_p6 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2575 4221
YP_009208315.1 NC_028904_p37 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29758 30123
YP_009208296.1 NC_028904_p18 tapemeasure phrog_305 tail length tape measure protein tail 1 11854 15966
YP_009208287.1 NC_028904_p9 scaffold protein phrog_233 head scaffolding protein head and packaging 1 6795 7334
YP_009208321.1 NC_028904_p43 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 31710 32897
YP_009208329.1 NC_028904_p51 serine integrase phrog_95 integrase integration and excision 1 37563 38975
YP_009208301.1 NC_028904_p23 hypothetical protein phrog_4817 unknown function unknown function 1 20559 21089
YP_009208323.1 NC_028904_p45 hypothetical protein phrog_3512 sigma factor transcription regulation 1 33275 33643
YP_009208340.1 NC_028904_p62 hypothetical protein phrog_3991 unknown function unknown function -1 42974 43234
YP_009208279.1 NC_028904_p1 hypothetical protein phrog_4207 unknown function unknown function -1 91 369
YP_009208300.1 NC_028904_p22 hypothetical protein phrog_4013 unknown function unknown function 1 18357 20531
YP_009208306.1 NC_028904_p28 hypothetical protein phrog_4092 unknown function unknown function 1 24358 24642
YP_009208351.1 NC_028904_p73 hypothetical protein phrog_4313 unknown function unknown function -1 47180 47992
YP_009208283.1 NC_028904_p5 hypothetical protein phrog_226 minor tail protein tail 1 2131 2559
YP_009208333.1 NC_028904_p55 hypothetical protein phrog_4071 unknown function unknown function -1 40527 40778
YP_009208324.1 NC_028904_p46 hypothetical protein phrog_4123 unknown function unknown function 1 33640 34035
YP_009208295.1 NC_028904_p17 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 11141 11464
YP_009208316.1 NC_028904_p38 hypothetical protein phrog_23527 unknown function unknown function 1 30120 30242
YP_009208338.1 NC_028904_p60 hypothetical protein phrog_4024 unknown function unknown function -1 41925 42314
YP_009208330.1 NC_028904_p52 ThyX phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 39168 39806
YP_009208314.1 NC_028904_p36 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 28790 29680
YP_009208294.1 NC_028904_p16 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 11141 11850
YP_009208325.1 NC_028904_p47 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 34136 36250
YP_009208349.1 NC_028904_p71 hypothetical protein phrog_2355 unknown function unknown function -1 46573 46935
YP_009208319.1 NC_028904_p41 hypothetical protein phrog_4022 unknown function unknown function 1 31176 31517
YP_009208298.1 NC_028904_p20 hypothetical protein phrog_538 minor tail protein tail 1 16831 18048
YP_009208299.1 NC_028904_p21 hypothetical protein phrog_1276 unknown function unknown function 1 18052 18357
YP_009208345.1 NC_028904_p67 hypothetical protein phrog_4867 unknown function unknown function -1 44745 45149
YP_009208342.1 NC_028904_p64 hypothetical protein phrog_3908 unknown function unknown function -1 43849 44073
YP_009208352.1 NC_028904_p74 hypothetical protein phrog_4485 unknown function unknown function -1 48017 48160
YP_009208346.1 NC_028904_p68 hypothetical protein phrog_3994 unknown function unknown function -1 45211 45690
YP_009208304.1 NC_028904_p26 hypothetical protein phrog_3534 unknown function unknown function 1 22973 23320
YP_009208317.1 NC_028904_p39 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism 1 30243 30680
YP_009208350.1 NC_028904_p72 hypothetical protein phrog_4275 unknown function unknown function -1 46938 47090
YP_009208281.1 NC_028904_p3 hypothetical protein phrog_3555 unknown function unknown function 1 1492 1746
YP_009208288.1 NC_028904_p10 major capsid protein phrog_283 major head protein head and packaging 1 7412 8494
YP_009208336.1 NC_028904_p58 hypothetical protein phrog_3424 unknown function unknown function -1 41175 41420
YP_009208307.1 NC_028904_p29 hypothetical protein phrog_4061 unknown function unknown function -1 24711 25001
YP_009208331.1 NC_028904_p53 hypothetical protein phrog_15428 unknown function unknown function -1 39896 40390
YP_009208309.1 NC_028904_p31 hypothetical protein phrog_20792 unknown function unknown function 1 25848 26276
YP_009208328.1 NC_028904_p50 hypothetical protein phrog_17008 unknown function unknown function 1 36858 37358
YP_009208339.1 NC_028904_p61 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other -1 42381 42977
YP_009208285.1 NC_028904_p7 portal protein phrog_104 portal protein head and packaging 1 4252 5685
YP_009208322.1 NC_028904_p44 hypothetical protein phrog_1340 unknown function unknown function 1 32894 33247
YP_009208313.1 NC_028904_p35 dCMP deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 28386 28790
YP_009208302.1 NC_028904_p24 hypothetical protein phrog_4817 unknown function unknown function 1 21138 21644
YP_009208282.1 NC_028904_p4 nuclease-like protein phrog_452 endonuclease DNA, RNA and nucleotide metabolism 1 1747 2115
YP_009208334.1 NC_028904_p56 hypothetical protein phrog_5971 unknown function unknown function -1 40775 40933
YP_009208289.1 NC_028904_p11 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 8566 9024
YP_009208291.1 NC_028904_p13 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 9353 9742
YP_009208308.1 NC_028904_p30 immunity repressor phrog_3929 transcriptional repressor transcription regulation 1 25135 25590
YP_009208343.1 NC_028904_p65 hypothetical protein phrog_4785 unknown function unknown function -1 44145 44414
YP_009208348.1 NC_028904_p70 hypothetical protein phrog_6619 unknown function unknown function -1 46243 46491
YP_009208312.1 NC_028904_p34 hypothetical protein phrog_1288 unknown function unknown function 1 27877 28311
YP_009208335.1 NC_028904_p57 hypothetical protein phrog_26679 unknown function unknown function -1 40954 41178
YP_009208292.1 NC_028904_p14 hypothetical protein phrog_123 tail terminator connector 1 9742 10245
YP_009208344.1 NC_028904_p66 hypothetical protein phrog_18679 unknown function unknown function -1 44518 44727
YP_009208347.1 NC_028904_p69 hypothetical protein phrog_4239 unknown function unknown function -1 45775 46182
YP_009208337.1 NC_028904_p59 hypothetical protein phrog_3965 unknown function unknown function -1 41434 41865
YP_009208293.1 NC_028904_p15 hypothetical protein phrog_117 major tail protein tail 1 10262 11005
YP_009208310.1 NC_028904_p32 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 26230 27183
YP_009208341.1 NC_028904_p63 HNH domain protein phrog_4842 HNH endonuclease DNA, RNA and nucleotide metabolism -1 43234 43728
YP_009208311.1 NC_028904_p33 hypothetical protein phrog_3912 unknown function unknown function 1 27315 27800
YP_009208297.1 NC_028904_p19 hypothetical protein phrog_33 distal tail protein Dit tail 1 15969 16826
YP_009208327.1 NC_028904_p49 Lsr2-like protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism 1 36527 36853
YP_009208332.1 NC_028904_p54 hypothetical protein phrog_29306 unknown function unknown function -1 40432 40530
YP_009208353.1 NC_028904_p75 hypothetical protein phrog_2563 unknown function unknown function -1 48259 48630
YP_009208286.1 NC_028904_p8 hypothetical protein phrog_193 head maturation protease head and packaging 1 5682 6791
YP_009208305.1 NC_028904_p27 endolysin phrog_1493 endolysin lysis 1 23390 24361
YP_009208303.1 NC_028904_p25 hypothetical protein phrog_988 tail protein tail 1 21720 22976