Genomic map of Mycobacterium phage Toto (NC_028906)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028906
Definition
Mycobacterium phage Toto, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus.
DB of origin
REFSEQ
Length
75933
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
140
%GC
63.01
Number of singletons
0
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009208500.1 NC_028906_p92 hypothetical protein phrog_2853 unknown function unknown function 1 57371 57529
YP_009208427.1 NC_028906_p19 major tail subunit phrog_476 major tail protein tail 1 11379 12350
YP_009208414.1 NC_028906_p6 terminase small subunit phrog_83 terminase small subunit head and packaging 1 1057 1518
YP_009208468.1 NC_028906_p60 hypothetical protein phrog_2744 unknown function unknown function 1 43168 43473
YP_009208530.1 NC_028906_p122 hypothetical protein phrog_2897 unknown function unknown function 1 69138 69269
YP_009208415.1 NC_028906_p7 hypothetical protein phrog_2142 unknown function unknown function 1 1511 1855
YP_009208517.1 NC_028906_p109 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 64738 65331
YP_009208447.1 NC_028906_p39 Lsr2 phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 34252 34638
YP_009208442.1 NC_028906_p34 hypothetical protein phrog_2424 unknown function unknown function 1 31523 31861
YP_009208456.1 NC_028906_p48 hypothetical protein phrog_2815 unknown function unknown function -1 36984 37130
YP_009208429.1 NC_028906_p21 tail assembly chaperone phrog_5940 tail assembly chaperone tail 1 13063 13341
YP_009208443.1 NC_028906_p35 LysB phrog_102 endolysin lysis 1 31858 32715
YP_009208487.1 NC_028906_p79 DnaB phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 50536 51744
YP_009208436.1 NC_028906_p28 hypothetical protein phrog_553 minor tail protein tail 1 27524 28468
YP_009208426.1 NC_028906_p18 hypothetical protein phrog_813 head-tail adaptor connector 1 10948 11352
YP_009208483.1 NC_028906_p75 hypothetical protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 48970 49287
YP_009208455.1 NC_028906_p47 hypothetical protein phrog_2702 unknown function unknown function -1 36750 36965
YP_009208423.1 NC_028906_p15 hypothetical protein phrog_442 head-tail adaptor connector 1 9679 10245
YP_009208461.1 NC_028906_p53 hypothetical protein phrog_950 unknown function unknown function -1 39602 40351
YP_009208412.1 NC_028906_p4 hypothetical protein phrog_2775 unknown function unknown function 1 601 786
YP_009208523.1 NC_028906_p115 hypothetical protein phrog_2279 unknown function unknown function 1 67623 67835
YP_009208473.1 NC_028906_p65 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 44548 45516
YP_009208508.1 NC_028906_p100 hypothetical protein phrog_1454 unknown function unknown function 1 61530 61727
YP_009208482.1 NC_028906_p74 hypothetical protein phrog_289 GTP-binding domain other 1 48560 48973
YP_009208459.1 NC_028906_p51 integrase (Tyr) phrog_1 integrase integration and excision 1 38365 39246
YP_009208451.1 NC_028906_p43 hypothetical protein phrog_647 unknown function unknown function -1 35825 36121
YP_009208466.1 NC_028906_p58 hypothetical protein phrog_2463 unknown function unknown function 1 42203 42349
YP_009208544.1 NC_028906_p136 hypothetical protein phrog_7581 unknown function unknown function -1 74080 74292
YP_009208490.1 NC_028906_p82 hypothetical protein phrog_2747 unknown function unknown function 1 52161 52382
YP_009208460.1 NC_028906_p52 hypothetical protein phrog_2842 unknown function unknown function 1 39385 39624
YP_009208510.1 NC_028906_p102 hypothetical protein phrog_2757 unknown function unknown function 1 62081 62329
YP_009208417.1 NC_028906_p9 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2303 4966
YP_009208516.1 NC_028906_p108 hypothetical protein phrog_4826 unknown function unknown function 1 64431 64748
YP_009208428.1 NC_028906_p20 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 12470 12931
YP_009208528.1 NC_028906_p120 hypothetical protein phrog_2296 unknown function unknown function 1 68825 68962
YP_009208524.1 NC_028906_p116 hypothetical protein phrog_3062 unknown function unknown function 1 67816 68070
YP_009208534.1 NC_028906_p126 hypothetical protein phrog_2942 unknown function unknown function -1 70562 70816
YP_009208422.1 NC_028906_p14 hypothetical protein phrog_2796 head-tail connector protein connector 1 9488 9679
YP_009208465.1 NC_028906_p57 hypothetical protein phrog_923 unknown function unknown function 1 41356 42201
YP_009208536.1 NC_028906_p128 hypothetical protein phrog_1915 unknown function unknown function -1 71249 71707
YP_009208503.1 NC_028906_p95 hypothetical protein phrog_2788 unknown function unknown function 1 58106 58441
YP_009208526.1 NC_028906_p118 hypothetical protein phrog_2764 unknown function unknown function 1 68477 68644
YP_009208497.1 NC_028906_p89 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 54914 56239
YP_009208430.1 NC_028906_p22 tapemeasure phrog_2723 tail length tape measure protein tail 1 13334 18067
YP_009208444.1 NC_028906_p36 hypothetical protein phrog_726 unknown function unknown function 1 32712 33128
YP_009208471.1 NC_028906_p63 hypothetical protein phrog_2221 unknown function unknown function 1 43840 44001
YP_009208486.1 NC_028906_p78 hypothetical protein phrog_572 unknown function unknown function 1 50157 50489
YP_009208478.1 NC_028906_p70 hypothetical protein phrog_1389 unknown function unknown function 1 47412 47780
YP_009208440.1 NC_028906_p32 LysA phrog_317 endolysin lysis 1 29710 31143
YP_009208531.1 NC_028906_p123 hypothetical protein phrog_3016 unknown function unknown function 1 69253 69414
YP_009208413.1 NC_028906_p5 hypothetical protein phrog_3858 unknown function unknown function 1 813 1064
YP_009208434.1 NC_028906_p26 minor tail phrog_346 minor tail protein tail 1 22284 24680
YP_009208410.1 NC_028906_p2 hypothetical protein phrog_4110 unknown function unknown function 1 267 449
YP_009208499.1 NC_028906_p91 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 57094 57354
YP_009208485.1 NC_028906_p77 hypothetical protein phrog_1882 unknown function unknown function 1 49510 50160
YP_009208489.1 NC_028906_p81 hypothetical protein phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 51911 52186
YP_009208446.1 NC_028906_p38 HNH endonuclease domain phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism -1 33542 34063
YP_009208454.1 NC_028906_p46 hypothetical protein phrog_2893 unknown function unknown function -1 36521 36691
YP_009208418.1 NC_028906_p10 hypothetical protein phrog_2845 unknown function unknown function 1 4978 5199
YP_009208525.1 NC_028906_p117 hypothetical protein phrog_2174 unknown function unknown function 1 68019 68480
YP_009208532.1 NC_028906_p124 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 69794 70057
YP_009208425.1 NC_028906_p17 hypothetical protein phrog_2805 minor tail protein tail 1 10590 10970
YP_009208494.1 NC_028906_p86 Pnk phrog_505 polynucleotide kinase other 1 53406 54347
YP_009208476.1 NC_028906_p68 hypothetical protein phrog_2750 unknown function unknown function 1 46631 46942
YP_009208493.1 NC_028906_p85 hypothetical protein phrog_2894 unknown function unknown function 1 53057 53251
YP_009208529.1 NC_028906_p121 hypothetical protein phrog_2925 unknown function unknown function 1 68959 69138
YP_009208453.1 NC_028906_p45 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 36357 36524
YP_009208518.1 NC_028906_p110 DnaQ-like phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 65342 66127
YP_009208477.1 NC_028906_p69 hypothetical protein phrog_2771 unknown function unknown function 1 46942 47412
YP_009208488.1 NC_028906_p80 hypothetical protein phrog_1091 unknown function unknown function 1 51741 51929
YP_009208512.1 NC_028906_p104 hypothetical protein phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 62698 62988
YP_009208539.1 NC_028906_p131 hypothetical protein phrog_2287 unknown function unknown function -1 72491 72727
YP_009208501.1 NC_028906_p93 hypothetical protein phrog_889 unknown function unknown function 1 57526 57978
YP_009208433.1 NC_028906_p25 minor tail phrog_732 minor tail protein tail 1 21446 22267
YP_009208513.1 NC_028906_p105 hypothetical protein phrog_2846 unknown function unknown function 1 63562 63786
YP_009208449.1 NC_028906_p41 hypothetical protein phrog_647 unknown function unknown function -1 34880 35347
YP_009208479.1 NC_028906_p71 hypothetical protein phrog_572 unknown function unknown function 1 47777 48154
YP_009208546.1 NC_028906_p138 hypothetical protein phrog_8479 unknown function unknown function -1 74490 74690
YP_009208491.1 NC_028906_p83 hypothetical protein phrog_9963 unknown function unknown function 1 52375 52701
YP_009208511.1 NC_028906_p103 hypothetical protein phrog_1969 unknown function unknown function 1 62334 62645
YP_009208547.1 NC_028906_p139 hypothetical protein phrog_2904 unknown function unknown function 1 74719 75066
YP_009208475.1 NC_028906_p67 Erf phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 45916 46638
YP_009208502.1 NC_028906_p94 hypothetical protein phrog_7833 unknown function unknown function 1 57982 58104
YP_009208470.1 NC_028906_p62 hypothetical protein phrog_2147 unknown function unknown function 1 43607 43840
YP_009208507.1 NC_028906_p99 ClpP protease phrog_94 head maturation protease head and packaging 1 60749 61528
YP_009208439.1 NC_028906_p31 hypothetical protein phrog_411 unknown function unknown function 1 29283 29567
YP_009208509.1 NC_028906_p101 hypothetical protein phrog_2785 unknown function unknown function 1 61724 62080
YP_009208535.1 NC_028906_p127 hypothetical protein phrog_3034 unknown function unknown function -1 70884 71252
YP_009208474.1 NC_028906_p66 hypothetical protein phrog_572 unknown function unknown function 1 45513 45923
YP_009208457.1 NC_028906_p49 hypothetical protein phrog_2759 unknown function unknown function -1 37130 37525
YP_009208505.1 NC_028906_p97 methyltransferase phrog_67 DNA methyltransferase other 1 58977 60200
YP_009208538.1 NC_028906_p130 hypothetical protein phrog_4547 unknown function unknown function -1 72053 72370
YP_009208520.1 NC_028906_p112 RecA phrog_97 UvsX-like recombinase other 1 66374 67336
YP_009208448.1 NC_028906_p40 hypothetical protein phrog_3481 unknown function unknown function -1 34686 34877
YP_009208543.1 NC_028906_p135 hypothetical protein phrog_2772 unknown function unknown function -1 73841 74077
YP_009208437.1 NC_028906_p29 hypothetical protein phrog_644 unknown function unknown function 1 28549 28977
YP_009208542.1 NC_028906_p134 hypothetical protein phrog_1438 unknown function unknown function -1 73671 73844
YP_009208515.1 NC_028906_p107 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 64057 64431
YP_009208537.1 NC_028906_p129 hypothetical protein phrog_1587 unknown function unknown function -1 71722 72051
YP_009208411.1 NC_028906_p3 hypothetical protein phrog_2829 unknown function unknown function 1 446 604
YP_009208496.1 NC_028906_p88 hypothetical protein phrog_2844 unknown function unknown function 1 54795 54917
YP_009208495.1 NC_028906_p87 hypothetical protein phrog_2495 unknown function unknown function 1 54454 54822
YP_009208480.1 NC_028906_p72 hypothetical protein phrog_1622 unknown function unknown function 1 48154 48327
YP_009208519.1 NC_028906_p111 hypothetical protein phrog_1941 unknown function unknown function 1 66124 66366
YP_009208492.1 NC_028906_p84 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 52677 53060
YP_009208541.1 NC_028906_p133 hypothetical protein phrog_3174 unknown function unknown function -1 73283 73666
YP_009208419.1 NC_028906_p11 portal phrog_12 portal protein head and packaging 1 5183 6742
YP_009208462.1 NC_028906_p54 hypothetical protein phrog_2745 transcriptional repressor transcription regulation -1 40470 40901
YP_009208527.1 NC_028906_p119 hypothetical protein phrog_2823 unknown function unknown function 1 68628 68828
YP_009208441.1 NC_028906_p33 holin phrog_526 holin lysis 1 31147 31530
YP_009208435.1 NC_028906_p27 D-Ala-D-Ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 24677 27523
YP_009208424.1 NC_028906_p16 hypothetical protein phrog_1531 head closure connector 1 10258 10593
YP_009208469.1 NC_028906_p61 hypothetical protein phrog_3463 unknown function unknown function 1 43492 43599
YP_009208498.1 NC_028906_p90 hypothetical protein phrog_1590 unknown function unknown function 1 56276 57097
YP_009208458.1 NC_028906_p50 hypothetical protein phrog_2847 unknown function unknown function -1 37812 38114
YP_009208521.1 NC_028906_p113 hypothetical protein phrog_2965 unknown function unknown function 1 67333 67470
YP_009208431.1 NC_028906_p23 minor tail phrog_106 minor tail protein tail 1 18097 19758
YP_009208445.1 NC_028906_p37 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 33135 33380
YP_009208481.1 NC_028906_p73 hypothetical protein phrog_2793 unknown function unknown function 1 48330 48563
YP_009208409.1 NC_028906_p1 hypothetical protein phrog_3456 unknown function unknown function 1 34 270
YP_009208522.1 NC_028906_p114 hypothetical protein phrog_2755 unknown function unknown function 1 67457 67630
YP_009208416.1 NC_028906_p8 hypothetical protein phrog_2202 unknown function unknown function -1 1956 2267
YP_009208484.1 NC_028906_p76 hypothetical protein phrog_1673 unknown function unknown function 1 49277 49513
YP_009208467.1 NC_028906_p59 hypothetical protein phrog_2800 unknown function unknown function 1 42346 42624
YP_009208450.1 NC_028906_p42 hypothetical protein phrog_722 unknown function unknown function -1 35344 35820
YP_009208533.1 NC_028906_p125 ParBc domain phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 70054 70443
YP_009208472.1 NC_028906_p64 hypothetical protein phrog_762 unknown function unknown function 1 44222 44551
YP_009208463.1 NC_028906_p55 hypothetical protein phrog_3071 unknown function unknown function 1 41127 41225
YP_009208452.1 NC_028906_p44 hypothetical protein phrog_4396 unknown function unknown function -1 36229 36357
YP_009208438.1 NC_028906_p30 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 28974 29150
YP_009208420.1 NC_028906_p12 hypothetical protein phrog_2753 head maturation protease head and packaging 1 6745 7839
YP_009208464.1 NC_028906_p56 hypothetical protein phrog_2852 unknown function unknown function 1 41222 41359
YP_009208540.1 NC_028906_p132 hypothetical protein phrog_2883 unknown function unknown function -1 72743 73279
YP_009208432.1 NC_028906_p24 minor tail phrog_110 minor tail protein tail 1 19830 21425
YP_009208548.1 NC_028906_p140 hypothetical protein phrog_2762 unknown function unknown function 1 75141 75362
YP_009208504.1 NC_028906_p96 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 58438 58980
YP_009208506.1 NC_028906_p98 ssDNA binding phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 60193 60633
YP_009208545.1 NC_028906_p137 hypothetical protein phrog_2795 unknown function unknown function -1 74289 74486
YP_009208514.1 NC_028906_p106 hypothetical protein phrog_1042 unknown function unknown function 1 63783 64046
YP_009208421.1 NC_028906_p13 major capsid phrog_10 major head protein head and packaging 1 7927 9420