| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028908 |
Definition |
Achromobacter phage phiAxp-3, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Jwalphavirus. |
DB of origin |
REFSEQ |
Length |
72825 |
Host Name |
Achromobacter xylosoxidans |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
80 |
%GC |
55.2 |
Number of singletons |
15 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009208674.1 | NC_028908_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9024 | 9290 |
| YP_009208709.1 | NC_028908_p57 | hypothetical protein | phrog_2220 | unknown function | unknown function | -1 | 47459 | 50110 |
| YP_009208700.1 | NC_028908_p48 | DNA primase | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 29429 | 31576 |
| YP_009208691.1 | NC_028908_p39 | hypothetical protein | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 18162 | 20717 |
| YP_009208732.1 | NC_028908_p80 | hypothetical protein | singleton | unknown function | unknown function | 1 | 71996 | 72328 |
| YP_009208658.1 | NC_028908_p6 | hypothetical protein | phrog_24111 | unknown function | unknown function | 1 | 1934 | 2284 |
| YP_009208689.1 | NC_028908_p37 | hypothetical protein | phrog_26767 | unknown function | unknown function | 1 | 16724 | 17191 |
| YP_009208657.1 | NC_028908_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1767 | 1937 |
| YP_009208660.1 | NC_028908_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2574 | 2759 |
| YP_009208710.1 | NC_028908_p58 | hypothetical protein | phrog_2050 | virion structural protein | head and packaging | -1 | 50114 | 51013 |
| YP_009208705.1 | NC_028908_p53 | hypothetical protein | phrog_19025 | unknown function | unknown function | 1 | 34252 | 34431 |
| YP_009208704.1 | NC_028908_p52 | hypothetical protein | phrog_18842 | unknown function | unknown function | 1 | 33792 | 34235 |
| YP_009208662.1 | NC_028908_p10 | hypothetical protein | phrog_5005 | unknown function | unknown function | 1 | 3061 | 3300 |
| YP_009208728.1 | NC_028908_p76 | hypothetical protein | phrog_7213 | unknown function | unknown function | 1 | 70440 | 70751 |
| YP_009208672.1 | NC_028908_p20 | hypothetical protein | phrog_24167 | unknown function | unknown function | 1 | 7916 | 8689 |
| YP_009208671.1 | NC_028908_p19 | hypothetical protein | phrog_31180 | unknown function | unknown function | 1 | 7674 | 7901 |
| YP_009208703.1 | NC_028908_p51 | hypothetical protein | phrog_18320 | unknown function | unknown function | 1 | 33368 | 33781 |
| YP_009208701.1 | NC_028908_p49 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 31640 | 32407 |
| YP_009208702.1 | NC_028908_p50 | single-stranded DNA-binding protein | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 32450 | 33217 |
| YP_009208659.1 | NC_028908_p7 | hypothetical protein | phrog_24239 | unknown function | unknown function | 1 | 2281 | 2571 |
| YP_009208723.1 | NC_028908_p71 | hypothetical protein | phrog_2125 | virion structural protein | head and packaging | -1 | 66610 | 67314 |
| YP_009208670.1 | NC_028908_p18 | kappa-carrageenase precursor | phrog_215 | structural protein with Ig domain | head and packaging | 1 | 6814 | 7587 |
| YP_009208663.1 | NC_028908_p11 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 3297 | 3623 |
| YP_009208730.1 | NC_028908_p78 | hypothetical protein | singleton | unknown function | unknown function | 1 | 71401 | 71718 |
| YP_009208697.1 | NC_028908_p45 | hypothetical protein | phrog_5974 | unknown function | unknown function | 1 | 27712 | 28116 |
| YP_009208712.1 | NC_028908_p60 | hypothetical protein | phrog_1357 | major head protein | head and packaging | -1 | 51873 | 53096 |
| YP_009208720.1 | NC_028908_p68 | hypothetical protein | phrog_16150 | tail assembly protein | tail | -1 | 58909 | 60186 |
| YP_009208694.1 | NC_028908_p42 | DNA helicase | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 23208 | 24515 |
| YP_009208716.1 | NC_028908_p64 | hypothetical protein | singleton | unknown function | unknown function | -1 | 57162 | 57485 |
| YP_009208687.1 | NC_028908_p35 | hypothetical protein | phrog_25795 | unknown function | unknown function | 1 | 15776 | 16309 |
| YP_009208721.1 | NC_028908_p69 | 160 kDa protein | phrog_15324 | tail sheath and receptor binding protein | tail | -1 | 60206 | 64393 |
| YP_009208668.1 | NC_028908_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5256 | 5435 |
| YP_009208661.1 | NC_028908_p9 | hypothetical protein | phrog_2510 | unknown function | unknown function | 1 | 2752 | 3057 |
| YP_009208725.1 | NC_028908_p73 | hypothetical protein | phrog_2109 | unknown function | unknown function | -1 | 68925 | 69605 |
| YP_009208707.1 | NC_028908_p55 | hypothetical protein | phrog_6126 | virion structural protein | head and packaging | -1 | 44849 | 46900 |
| YP_009208696.1 | NC_028908_p44 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 25055 | 27715 |
| YP_009208715.1 | NC_028908_p63 | portal protein | phrog_1216 | portal protein | head and packaging | -1 | 54824 | 57106 |
| YP_009208684.1 | NC_028908_p32 | DCTP deaminase | phrog_1663 | dCTP deaminase | DNA, RNA and nucleotide metabolism | 1 | 13479 | 13976 |
| YP_009208708.1 | NC_028908_p56 | hypothetical protein | phrog_16623 | unknown function | unknown function | -1 | 46913 | 47446 |
| YP_009208693.1 | NC_028908_p41 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 22695 | 23153 |
| YP_009208699.1 | NC_028908_p47 | hypothetical protein | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 28440 | 29432 |
| YP_009208654.1 | NC_028908_p2 | hypothetical protein | phrog_4099 | unknown function | unknown function | 1 | 640 | 1065 |
| YP_009208718.1 | NC_028908_p66 | hypothetical protein | phrog_1356 | holin | lysis | -1 | 58203 | 58490 |
| YP_009208667.1 | NC_028908_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4966 | 5253 |
| YP_009208706.1 | NC_028908_p54 | virion RNA polymerase | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 34464 | 44750 |
| YP_009208680.1 | NC_028908_p28 | hypothetical protein | phrog_1297 | ATPase | other | 1 | 10704 | 11786 |
| YP_009208719.1 | NC_028908_p67 | hypothetical protein | phrog_5211 | unknown function | unknown function | -1 | 58469 | 58804 |
| YP_009208683.1 | NC_028908_p31 | hypothetical protein | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 12325 | 13482 |
| YP_009208690.1 | NC_028908_p38 | thymidilate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 17188 | 18099 |
| YP_009208686.1 | NC_028908_p34 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 15442 | 15765 |
| YP_009208713.1 | NC_028908_p61 | tape measure protein | phrog_2120 | tail length tape measure protein | tail | -1 | 53109 | 54413 |
| YP_009208726.1 | NC_028908_p74 | hypothetical protein | phrog_3934 | unknown function | unknown function | -1 | 69649 | 70116 |
| YP_009208664.1 | NC_028908_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3620 | 3739 |
| YP_009208669.1 | NC_028908_p17 | hypothetical protein | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 5462 | 6676 |
| YP_009208655.1 | NC_028908_p3 | hypothetical protein | phrog_9995 | unknown function | unknown function | 1 | 1229 | 1606 |
| YP_009208727.1 | NC_028908_p75 | hypothetical protein | singleton | unknown function | unknown function | -1 | 70113 | 70304 |
| YP_009208681.1 | NC_028908_p29 | hypothetical protein | phrog_19202 | unknown function | unknown function | 1 | 11789 | 11974 |
| YP_009208711.1 | NC_028908_p59 | hypothetical protein | phrog_2130 | unknown function | unknown function | -1 | 51090 | 51806 |
| YP_009208677.1 | NC_028908_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9823 | 10278 |
| YP_009208729.1 | NC_028908_p77 | hypothetical protein | singleton | unknown function | unknown function | 1 | 71010 | 71411 |
| YP_009208673.1 | NC_028908_p21 | HNH endonuclease | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 8689 | 9027 |
| YP_009208698.1 | NC_028908_p46 | hypothetical protein | phrog_4521 | unknown function | unknown function | 1 | 28119 | 28394 |
| YP_009208656.1 | NC_028908_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1628 | 1774 |
| YP_009208695.1 | NC_028908_p43 | hypothetical protein | phrog_4881 | unknown function | unknown function | 1 | 24525 | 25046 |
| YP_009208688.1 | NC_028908_p36 | hypothetical protein | phrog_23639 | unknown function | unknown function | 1 | 16309 | 16509 |
| YP_009208685.1 | NC_028908_p33 | hypothetical protein | phrog_27287 | unknown function | unknown function | 1 | 14274 | 14435 |
| YP_009208675.1 | NC_028908_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9340 | 9594 |
| YP_009208665.1 | NC_028908_p13 | hypothetical protein | phrog_2072 | unknown function | unknown function | 1 | 3736 | 4119 |
| YP_009208666.1 | NC_028908_p14 | hypothetical protein | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 4142 | 4969 |
| YP_009208682.1 | NC_028908_p30 | hypothetical protein | phrog_13631 | unknown function | unknown function | 1 | 11978 | 12340 |
| YP_009208679.1 | NC_028908_p27 | hypothetical protein | phrog_21163 | unknown function | unknown function | 1 | 10465 | 10686 |
| YP_009208653.1 | NC_028908_p1 | hypothetical protein | phrog_5020 | unknown function | unknown function | 1 | 141 | 461 |
| YP_009208717.1 | NC_028908_p65 | N-acetylmuramidase | phrog_315 | endolysin | lysis | -1 | 57608 | 58240 |
| YP_009208676.1 | NC_028908_p24 | hypothetical protein | phrog_22234 | unknown function | unknown function | 1 | 9578 | 9841 |
| YP_009208731.1 | NC_028908_p79 | hypothetical protein | phrog_23882 | unknown function | unknown function | 1 | 71715 | 71999 |
| YP_009208678.1 | NC_028908_p26 | hypothetical protein | phrog_34899 | unknown function | unknown function | 1 | 10275 | 10463 |
| YP_009208714.1 | NC_028908_p62 | hypothetical protein | phrog_2346 | unknown function | unknown function | -1 | 54439 | 54813 |
| YP_009208722.1 | NC_028908_p70 | hypothetical protein | singleton | unknown function | unknown function | -1 | 64462 | 66606 |
| YP_009208724.1 | NC_028908_p72 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 67322 | 68932 |
| YP_009208692.1 | NC_028908_p40 | hypothetical protein | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 20727 | 22319 |