Genomic map of Achromobacter phage phiAxp-3 (NC_028908)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028908
Definition
Achromobacter phage phiAxp-3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Jwalphavirus.
DB of origin
REFSEQ
Length
72825
Host Name
Achromobacter xylosoxidans
Host domain
Bacteria
Is prophage?
undef
Number of proteins
80
%GC
55.2
Number of singletons
15
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009208674.1 NC_028908_p22 hypothetical protein singleton unknown function unknown function 1 9024 9290
YP_009208709.1 NC_028908_p57 hypothetical protein phrog_2220 unknown function unknown function -1 47459 50110
YP_009208700.1 NC_028908_p48 DNA primase phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 29429 31576
YP_009208691.1 NC_028908_p39 hypothetical protein phrog_2979 RIIA lysis inhibitor lysis 1 18162 20717
YP_009208732.1 NC_028908_p80 hypothetical protein singleton unknown function unknown function 1 71996 72328
YP_009208658.1 NC_028908_p6 hypothetical protein phrog_24111 unknown function unknown function 1 1934 2284
YP_009208689.1 NC_028908_p37 hypothetical protein phrog_26767 unknown function unknown function 1 16724 17191
YP_009208657.1 NC_028908_p5 hypothetical protein singleton unknown function unknown function 1 1767 1937
YP_009208660.1 NC_028908_p8 hypothetical protein singleton unknown function unknown function 1 2574 2759
YP_009208710.1 NC_028908_p58 hypothetical protein phrog_2050 virion structural protein head and packaging -1 50114 51013
YP_009208705.1 NC_028908_p53 hypothetical protein phrog_19025 unknown function unknown function 1 34252 34431
YP_009208704.1 NC_028908_p52 hypothetical protein phrog_18842 unknown function unknown function 1 33792 34235
YP_009208662.1 NC_028908_p10 hypothetical protein phrog_5005 unknown function unknown function 1 3061 3300
YP_009208728.1 NC_028908_p76 hypothetical protein phrog_7213 unknown function unknown function 1 70440 70751
YP_009208672.1 NC_028908_p20 hypothetical protein phrog_24167 unknown function unknown function 1 7916 8689
YP_009208671.1 NC_028908_p19 hypothetical protein phrog_31180 unknown function unknown function 1 7674 7901
YP_009208703.1 NC_028908_p51 hypothetical protein phrog_18320 unknown function unknown function 1 33368 33781
YP_009208701.1 NC_028908_p49 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 31640 32407
YP_009208702.1 NC_028908_p50 single-stranded DNA-binding protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 32450 33217
YP_009208659.1 NC_028908_p7 hypothetical protein phrog_24239 unknown function unknown function 1 2281 2571
YP_009208723.1 NC_028908_p71 hypothetical protein phrog_2125 virion structural protein head and packaging -1 66610 67314
YP_009208670.1 NC_028908_p18 kappa-carrageenase precursor phrog_215 structural protein with Ig domain head and packaging 1 6814 7587
YP_009208663.1 NC_028908_p11 hypothetical protein phrog_464 unknown function unknown function 1 3297 3623
YP_009208730.1 NC_028908_p78 hypothetical protein singleton unknown function unknown function 1 71401 71718
YP_009208697.1 NC_028908_p45 hypothetical protein phrog_5974 unknown function unknown function 1 27712 28116
YP_009208712.1 NC_028908_p60 hypothetical protein phrog_1357 major head protein head and packaging -1 51873 53096
YP_009208720.1 NC_028908_p68 hypothetical protein phrog_16150 tail assembly protein tail -1 58909 60186
YP_009208694.1 NC_028908_p42 DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 23208 24515
YP_009208716.1 NC_028908_p64 hypothetical protein singleton unknown function unknown function -1 57162 57485
YP_009208687.1 NC_028908_p35 hypothetical protein phrog_25795 unknown function unknown function 1 15776 16309
YP_009208721.1 NC_028908_p69 160 kDa protein phrog_15324 tail sheath and receptor binding protein tail -1 60206 64393
YP_009208668.1 NC_028908_p16 hypothetical protein singleton unknown function unknown function 1 5256 5435
YP_009208661.1 NC_028908_p9 hypothetical protein phrog_2510 unknown function unknown function 1 2752 3057
YP_009208725.1 NC_028908_p73 hypothetical protein phrog_2109 unknown function unknown function -1 68925 69605
YP_009208707.1 NC_028908_p55 hypothetical protein phrog_6126 virion structural protein head and packaging -1 44849 46900
YP_009208696.1 NC_028908_p44 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 25055 27715
YP_009208715.1 NC_028908_p63 portal protein phrog_1216 portal protein head and packaging -1 54824 57106
YP_009208684.1 NC_028908_p32 DCTP deaminase phrog_1663 dCTP deaminase DNA, RNA and nucleotide metabolism 1 13479 13976
YP_009208708.1 NC_028908_p56 hypothetical protein phrog_16623 unknown function unknown function -1 46913 47446
YP_009208693.1 NC_028908_p41 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other 1 22695 23153
YP_009208699.1 NC_028908_p47 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 28440 29432
YP_009208654.1 NC_028908_p2 hypothetical protein phrog_4099 unknown function unknown function 1 640 1065
YP_009208718.1 NC_028908_p66 hypothetical protein phrog_1356 holin lysis -1 58203 58490
YP_009208667.1 NC_028908_p15 hypothetical protein singleton unknown function unknown function 1 4966 5253
YP_009208706.1 NC_028908_p54 virion RNA polymerase phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 34464 44750
YP_009208680.1 NC_028908_p28 hypothetical protein phrog_1297 ATPase other 1 10704 11786
YP_009208719.1 NC_028908_p67 hypothetical protein phrog_5211 unknown function unknown function -1 58469 58804
YP_009208683.1 NC_028908_p31 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 12325 13482
YP_009208690.1 NC_028908_p38 thymidilate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 17188 18099
YP_009208686.1 NC_028908_p34 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 15442 15765
YP_009208713.1 NC_028908_p61 tape measure protein phrog_2120 tail length tape measure protein tail -1 53109 54413
YP_009208726.1 NC_028908_p74 hypothetical protein phrog_3934 unknown function unknown function -1 69649 70116
YP_009208664.1 NC_028908_p12 hypothetical protein singleton unknown function unknown function 1 3620 3739
YP_009208669.1 NC_028908_p17 hypothetical protein phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 5462 6676
YP_009208655.1 NC_028908_p3 hypothetical protein phrog_9995 unknown function unknown function 1 1229 1606
YP_009208727.1 NC_028908_p75 hypothetical protein singleton unknown function unknown function -1 70113 70304
YP_009208681.1 NC_028908_p29 hypothetical protein phrog_19202 unknown function unknown function 1 11789 11974
YP_009208711.1 NC_028908_p59 hypothetical protein phrog_2130 unknown function unknown function -1 51090 51806
YP_009208677.1 NC_028908_p25 hypothetical protein singleton unknown function unknown function 1 9823 10278
YP_009208729.1 NC_028908_p77 hypothetical protein singleton unknown function unknown function 1 71010 71411
YP_009208673.1 NC_028908_p21 HNH endonuclease phrog_1872 endonuclease DNA, RNA and nucleotide metabolism 1 8689 9027
YP_009208698.1 NC_028908_p46 hypothetical protein phrog_4521 unknown function unknown function 1 28119 28394
YP_009208656.1 NC_028908_p4 hypothetical protein singleton unknown function unknown function 1 1628 1774
YP_009208695.1 NC_028908_p43 hypothetical protein phrog_4881 unknown function unknown function 1 24525 25046
YP_009208688.1 NC_028908_p36 hypothetical protein phrog_23639 unknown function unknown function 1 16309 16509
YP_009208685.1 NC_028908_p33 hypothetical protein phrog_27287 unknown function unknown function 1 14274 14435
YP_009208675.1 NC_028908_p23 hypothetical protein singleton unknown function unknown function 1 9340 9594
YP_009208665.1 NC_028908_p13 hypothetical protein phrog_2072 unknown function unknown function 1 3736 4119
YP_009208666.1 NC_028908_p14 hypothetical protein phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 4142 4969
YP_009208682.1 NC_028908_p30 hypothetical protein phrog_13631 unknown function unknown function 1 11978 12340
YP_009208679.1 NC_028908_p27 hypothetical protein phrog_21163 unknown function unknown function 1 10465 10686
YP_009208653.1 NC_028908_p1 hypothetical protein phrog_5020 unknown function unknown function 1 141 461
YP_009208717.1 NC_028908_p65 N-acetylmuramidase phrog_315 endolysin lysis -1 57608 58240
YP_009208676.1 NC_028908_p24 hypothetical protein phrog_22234 unknown function unknown function 1 9578 9841
YP_009208731.1 NC_028908_p79 hypothetical protein phrog_23882 unknown function unknown function 1 71715 71999
YP_009208678.1 NC_028908_p26 hypothetical protein phrog_34899 unknown function unknown function 1 10275 10463
YP_009208714.1 NC_028908_p62 hypothetical protein phrog_2346 unknown function unknown function -1 54439 54813
YP_009208722.1 NC_028908_p70 hypothetical protein singleton unknown function unknown function -1 64462 66606
YP_009208724.1 NC_028908_p72 hypothetical protein phrog_38 terminase large subunit head and packaging -1 67322 68932
YP_009208692.1 NC_028908_p40 hypothetical protein phrog_2886 RIIB lysis inhibitor lysis 1 20727 22319