Genomic map of Pseudomonas phage DL54 (NC_028919)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028919
Definition
Pseudomonas phage DL54, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Bruynoghevirus; unclassified Bruynoghevirus.
DB of origin
REFSEQ
Length
45673
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
71
%GC
52.39
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009209380.1 NC_028919_p62 hypothetical protein phrog_10516 unknown function unknown function -1 42146 42391
YP_009209387.1 NC_028919_p69 hypothetical protein phrog_9596 unknown function unknown function -1 43840 44028
YP_009209347.1 NC_028919_p29 homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 23609 24058
YP_009209321.1 NC_028919_p3 terminase large subunit phrog_2 terminase large subunit head and packaging 1 2035 3483
YP_009209323.1 NC_028919_p5 hypothetical protein phrog_8161 unknown function unknown function 1 5633 5848
YP_009209368.1 NC_028919_p50 hypothetical protein phrog_3815 COOH.NH2 ligase other -1 36465 37265
YP_009209386.1 NC_028919_p68 hypothetical protein phrog_10887 unknown function unknown function -1 43703 43843
YP_009209322.1 NC_028919_p4 portal (connector) protein phrog_1216 portal protein head and packaging 1 3483 5603
YP_009209370.1 NC_028919_p52 hypothetical protein phrog_9504 unknown function unknown function -1 38237 39199
YP_009209385.1 NC_028919_p67 hypothetical protein phrog_12073 unknown function unknown function -1 43341 43523
YP_009209338.1 NC_028919_p20 hypothetical protein phrog_8295 virion structural protein head and packaging 1 18700 19587
YP_009209337.1 NC_028919_p19 hypothetical protein phrog_6958 virion structural protein head and packaging 1 15521 18688
YP_009209383.1 NC_028919_p65 hypothetical protein phrog_14185 unknown function unknown function -1 42699 42974
YP_009209369.1 NC_028919_p51 hypothetical protein phrog_7973 unknown function unknown function -1 37262 38218
YP_009209342.1 NC_028919_p24 hypothetical protein phrog_9960 unknown function unknown function -1 20571 20789
YP_009209381.1 NC_028919_p63 hypothetical protein phrog_11682 unknown function unknown function -1 42400 42546
YP_009209349.1 NC_028919_p31 hypothetical protein phrog_5033 endolysin; inhibits RNA polymerase lysis -1 24314 24724
YP_009209325.1 NC_028919_p7 capsid and scaffold protein phrog_1328 major head protein head and packaging 1 6859 7812
YP_009209333.1 NC_028919_p15 hypothetical protein phrog_7642 unknown function unknown function 1 12115 12549
YP_009209355.1 NC_028919_p37 hypothetical protein phrog_9555 unknown function unknown function -1 28114 28275
YP_009209326.1 NC_028919_p8 hypothetical protein phrog_3982 unknown function unknown function 1 7861 8181
YP_009209377.1 NC_028919_p59 hypothetical protein phrog_4955 unknown function unknown function -1 41457 41708
YP_009209367.1 NC_028919_p49 hypothetical protein phrog_4877 unknown function unknown function -1 35903 36472
YP_009209335.1 NC_028919_p17 hypothetical protein phrog_27875 unknown function unknown function 1 13601 13831
YP_009209374.1 NC_028919_p56 hypothetical protein phrog_29336 unknown function unknown function -1 40469 40687
YP_009209345.1 NC_028919_p27 hypothetical protein phrog_7967 unknown function unknown function -1 21733 22713
YP_009209340.1 NC_028919_p22 hypothetical protein phrog_8402 unknown function unknown function -1 20165 20371
YP_009209328.1 NC_028919_p10 hypothetical protein phrog_402 unknown function unknown function 1 8822 9013
YP_009209348.1 NC_028919_p30 hypothetical protein phrog_8565 unknown function unknown function -1 24058 24342
YP_009209363.1 NC_028919_p45 hypothetical protein phrog_2599 ribosomal protein S6 glutaminyl transferase moron, auxiliary metabolic gene and host takeover -1 31962 32846
YP_009209351.1 NC_028919_p33 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 25419 27056
YP_009209334.1 NC_028919_p16 hypothetical protein phrog_7477 unknown function unknown function 1 12530 13471
YP_009209382.1 NC_028919_p64 hypothetical protein phrog_16829 unknown function unknown function -1 42533 42688
YP_009209379.1 NC_028919_p61 hypothetical protein phrog_9861 unknown function unknown function -1 41875 42141
YP_009209364.1 NC_028919_p46 hypothetical protein phrog_9335 unknown function unknown function -1 32977 33198
YP_009209361.1 NC_028919_p43 hypothetical protein phrog_8197 unknown function unknown function -1 31187 31564
YP_009209331.1 NC_028919_p13 hypothetical protein phrog_3287 virion structural protein head and packaging 1 9891 11432
YP_009209324.1 NC_028919_p6 capsid and scaffold protein phrog_3927 head scaffolding protein head and packaging 1 5848 6840
YP_009209352.1 NC_028919_p34 hypothetical protein phrog_9754 unknown function unknown function -1 27057 27254
YP_009209341.1 NC_028919_p23 hypothetical protein phrog_2251 unknown function unknown function -1 20358 20567
YP_009209378.1 NC_028919_p60 hypothetical protein phrog_8294 unknown function unknown function -1 41705 41875
YP_009209384.1 NC_028919_p66 hypothetical protein phrog_8365 unknown function unknown function -1 42976 43209
YP_009209362.1 NC_028919_p44 hypothetical protein phrog_2520 gamma-glutamyl cyclotransferase moron, auxiliary metabolic gene and host takeover -1 31564 31962
YP_009209365.1 NC_028919_p47 hypothetical protein phrog_4736 L-glutamine-D-fructose-6-phosphate aminotransferase other -1 33208 34740
YP_009209350.1 NC_028919_p32 helix-destabilizing protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24795 25349
YP_009209329.1 NC_028919_p11 hypothetical protein phrog_8140 unknown function unknown function 1 8997 9245
YP_009209376.1 NC_028919_p58 hypothetical protein phrog_8299 unknown function unknown function -1 41032 41457
YP_009209327.1 NC_028919_p9 hypothetical protein phrog_2941 virion structural protein head and packaging 1 8185 8811
YP_009209389.1 NC_028919_p71 hypothetical protein phrog_14276 unknown function unknown function -1 44617 44922
YP_009209320.1 NC_028919_p2 baseplate hub protein phrog_7 endolysin lysis 1 1637 2035
YP_009209371.1 NC_028919_p53 hypothetical protein phrog_23893 unknown function unknown function -1 39270 39398
YP_009209344.1 NC_028919_p26 hypothetical protein phrog_14437 endonuclease DNA, RNA and nucleotide metabolism -1 21540 21779
YP_009209332.1 NC_028919_p14 hypothetical protein phrog_8092 unknown function unknown function 1 11429 12118
YP_009209346.1 NC_028919_p28 DNA polymerase I phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 22694 23524
YP_009209375.1 NC_028919_p57 hypothetical protein phrog_11110 unknown function unknown function -1 40689 40901
YP_009209354.1 NC_028919_p36 hypothetical protein phrog_7045 holin lysis -1 27845 28123
YP_009209330.1 NC_028919_p12 tail fibers protein phrog_5795 tail protein tail 1 9235 9882
YP_009209358.1 NC_028919_p40 hypothetical protein phrog_4590 unknown function unknown function -1 28706 29002
YP_009209339.1 NC_028919_p21 hypothetical protein phrog_8259 unknown function unknown function 1 19602 19958
YP_009209388.1 NC_028919_p70 hypothetical protein phrog_1448 unknown function unknown function -1 44131 44613
YP_009209319.1 NC_028919_p1 hypothetical protein phrog_51 terminase small subunit head and packaging 1 1147 1605
YP_009209366.1 NC_028919_p48 hypothetical protein phrog_7631 amidoligase enzyme other -1 34752 35927
YP_009209343.1 NC_028919_p25 hypothetical protein phrog_221 metallo-phosphoesterase other -1 20786 21547
YP_009209357.1 NC_028919_p39 hypothetical protein phrog_12255 unknown function unknown function -1 28437 28670
YP_009209373.1 NC_028919_p55 hypothetical protein phrog_23984 unknown function unknown function -1 40244 40462
YP_009209359.1 NC_028919_p41 DNA polymerase phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 28984 29493
YP_009209336.1 NC_028919_p18 hypothetical protein phrog_7725 virion structural protein head and packaging 1 13856 15370
YP_009209353.1 NC_028919_p35 hypothetical protein phrog_7819 tail length tape measure protein tail -1 27259 27768
YP_009209372.1 NC_028919_p54 hypothetical protein phrog_200 lipoprotein other -1 39410 40234
YP_009209360.1 NC_028919_p42 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 29477 31186
YP_009209356.1 NC_028919_p38 hypothetical protein phrog_9813 unknown function unknown function -1 28265 28456