| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028924 |
Definition |
Polaribacter phage P12002L, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Incheonvrus. |
DB of origin |
REFSEQ |
Length |
48689 |
Host Name |
Polaribacter |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
82 |
%GC |
28.93 |
Number of singletons |
5 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009209685.1 | NC_028924_p25 | hypothetical protein | phrog_32987 | unknown function | unknown function | 1 | 15356 | 15982 |
| YP_009209730.1 | NC_028924_p70 | hypothetical protein | phrog_37893 | unknown function | unknown function | -1 | 43946 | 44158 |
| YP_009209696.1 | NC_028924_p36 | DNA methyltransferase | phrog_67 | DNA methyltransferase | other | -1 | 30078 | 30848 |
| YP_009209715.1 | NC_028924_p55 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38950 | 39099 |
| YP_009209666.1 | NC_028924_p6 | hypothetical protein | phrog_38150 | unknown function | unknown function | 1 | 1965 | 2288 |
| YP_009209688.1 | NC_028924_p28 | hypothetical protein | phrog_26672 | virion structural protein | head and packaging | 1 | 21577 | 23616 |
| YP_009209681.1 | NC_028924_p21 | hypothetical protein | phrog_31902 | unknown function | unknown function | 1 | 12109 | 13032 |
| YP_009209703.1 | NC_028924_p43 | hypothetical protein | phrog_26016 | unknown function | unknown function | -1 | 32933 | 33700 |
| YP_009209721.1 | NC_028924_p61 | hypothetical protein | phrog_4763 | unknown function | unknown function | -1 | 41006 | 41779 |
| YP_009209695.1 | NC_028924_p35 | DNA methyltransferase | phrog_67 | DNA methyltransferase | other | -1 | 29248 | 29973 |
| YP_009209694.1 | NC_028924_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28524 | 29165 |
| YP_009209690.1 | NC_028924_p30 | hypothetical protein | phrog_16200 | unknown function | unknown function | 1 | 26628 | 26915 |
| YP_009209716.1 | NC_028924_p56 | hypothetical protein | phrog_26093 | unknown function | unknown function | -1 | 39253 | 39480 |
| YP_009209678.1 | NC_028924_p18 | hypothetical protein | phrog_32171 | unknown function | unknown function | 1 | 10779 | 11414 |
| YP_009209717.1 | NC_028924_p57 | hypothetical protein | phrog_31388 | unknown function | unknown function | -1 | 39530 | 39664 |
| YP_009209699.1 | NC_028924_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32098 | 32271 |
| YP_009209741.1 | NC_028924_p81 | hypothetical protein | phrog_5149 | unknown function | unknown function | -1 | 47485 | 47706 |
| YP_009209692.1 | NC_028924_p32 | hypothetical protein | phrog_1768 | endolysin | lysis | 1 | 27531 | 27917 |
| YP_009209665.1 | NC_028924_p5 | hypothetical protein | phrog_8898 | unknown function | unknown function | 1 | 1757 | 1984 |
| YP_009209682.1 | NC_028924_p22 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 13184 | 13696 |
| YP_009209723.1 | NC_028924_p63 | hypothetical protein | phrog_34476 | unknown function | unknown function | -1 | 42463 | 42600 |
| YP_009209728.1 | NC_028924_p68 | hypothetical protein | phrog_30727 | unknown function | unknown function | -1 | 43380 | 43541 |
| YP_009209662.1 | NC_028924_p2 | hypothetical protein | phrog_38100 | unknown function | unknown function | 1 | 1035 | 1154 |
| YP_009209702.1 | NC_028924_p42 | hypothetical protein | phrog_30810 | unknown function | unknown function | -1 | 32693 | 32917 |
| YP_009209712.1 | NC_028924_p52 | hypothetical protein | phrog_35066 | unknown function | unknown function | -1 | 36951 | 37199 |
| YP_009209675.1 | NC_028924_p15 | hypothetical protein | phrog_31824 | unknown function | unknown function | 1 | 8588 | 8890 |
| YP_009209687.1 | NC_028924_p27 | hypothetical protein | phrog_15220 | virion structural protein | head and packaging | 1 | 19349 | 21577 |
| YP_009209671.1 | NC_028924_p11 | hypothetical protein | phrog_36519 | unknown function | unknown function | 1 | 4609 | 4782 |
| YP_009209698.1 | NC_028924_p38 | DNA methyltransferase | phrog_67 | DNA methyltransferase | other | -1 | 31326 | 32126 |
| YP_009209739.1 | NC_028924_p79 | hypothetical protein | phrog_29413 | unknown function | unknown function | -1 | 46947 | 47177 |
| YP_009209713.1 | NC_028924_p53 | DNA modification protein | phrog_1384 | Mom-like DNA modification protein | other | -1 | 37305 | 38015 |
| YP_009209725.1 | NC_028924_p65 | hypothetical protein | phrog_28818 | unknown function | unknown function | -1 | 42827 | 42970 |
| YP_009209707.1 | NC_028924_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35372 | 35503 |
| YP_009209700.1 | NC_028924_p40 | hypothetical protein | phrog_37969 | unknown function | unknown function | -1 | 32279 | 32455 |
| YP_009209732.1 | NC_028924_p72 | hypothetical protein | phrog_33541 | unknown function | unknown function | -1 | 44835 | 45125 |
| YP_009209734.1 | NC_028924_p74 | hypothetical protein | phrog_35829 | unknown function | unknown function | -1 | 45442 | 45774 |
| YP_009209727.1 | NC_028924_p67 | hypothetical protein | phrog_37861 | unknown function | unknown function | -1 | 43246 | 43383 |
| YP_009209742.1 | NC_028924_p82 | hypothetical protein | phrog_38475 | unknown function | unknown function | -1 | 47961 | 48107 |
| YP_009209669.1 | NC_028924_p9 | hypothetical protein | phrog_36127 | unknown function | unknown function | 1 | 4201 | 4401 |
| YP_009209670.1 | NC_028924_p10 | hypothetical protein | phrog_236 | nucleotide kinase | other | 1 | 4402 | 4596 |
| YP_009209735.1 | NC_028924_p75 | hypothetical protein | phrog_36701 | unknown function | unknown function | -1 | 45787 | 45957 |
| YP_009209679.1 | NC_028924_p19 | hypothetical protein | phrog_29973 | unknown function | unknown function | 1 | 11368 | 11901 |
| YP_009209738.1 | NC_028924_p78 | hypothetical protein | phrog_32790 | unknown function | unknown function | -1 | 46585 | 46914 |
| YP_009209686.1 | NC_028924_p26 | tail length tape measure protein | phrog_18891 | tail length tape measure protein | tail | 1 | 15972 | 19346 |
| YP_009209705.1 | NC_028924_p45 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | -1 | 34489 | 34893 |
| YP_009209704.1 | NC_028924_p44 | replication protein | phrog_678 | replication initiation O-like | DNA, RNA and nucleotide metabolism | -1 | 33707 | 34375 |
| YP_009209667.1 | NC_028924_p7 | hypothetical protein | phrog_34347 | unknown function | unknown function | 1 | 2257 | 2454 |
| YP_009209740.1 | NC_028924_p80 | hypothetical protein | phrog_36493 | unknown function | unknown function | -1 | 47239 | 47427 |
| YP_009209676.1 | NC_028924_p16 | hypothetical protein | phrog_30432 | unknown function | unknown function | 1 | 8902 | 9720 |
| YP_009209714.1 | NC_028924_p54 | DNA methylase | phrog_56 | DNA methyltransferase | other | -1 | 38118 | 38816 |
| YP_009209724.1 | NC_028924_p64 | hypothetical protein | phrog_36835 | unknown function | unknown function | -1 | 42587 | 42796 |
| YP_009209672.1 | NC_028924_p12 | hypothetical protein | phrog_24909 | unknown function | unknown function | 1 | 4794 | 5108 |
| YP_009209731.1 | NC_028924_p71 | hypothetical protein | phrog_29067 | unknown function | unknown function | -1 | 44162 | 44821 |
| YP_009209684.1 | NC_028924_p24 | hypothetical protein | phrog_28770 | unknown function | unknown function | -1 | 14812 | 15093 |
| YP_009209691.1 | NC_028924_p31 | hypothetical protein | phrog_29276 | unknown function | unknown function | 1 | 26905 | 27528 |
| YP_009209673.1 | NC_028924_p13 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 5260 | 6801 |
| YP_009209711.1 | NC_028924_p51 | NinG recombination protein | phrog_171 | NinG/ Rap DNA junction specific endonuclease | DNA, RNA and nucleotide metabolism | -1 | 36311 | 36973 |
| YP_009209718.1 | NC_028924_p58 | hypothetical protein | phrog_30067 | unknown function | unknown function | -1 | 39708 | 39995 |
| YP_009209710.1 | NC_028924_p50 | hypothetical protein | phrog_35267 | unknown function | unknown function | -1 | 35863 | 36309 |
| YP_009209736.1 | NC_028924_p76 | hypothetical protein | phrog_37806 | unknown function | unknown function | -1 | 46027 | 46332 |
| YP_009209663.1 | NC_028924_p3 | hypothetical protein | phrog_8898 | unknown function | unknown function | 1 | 1289 | 1474 |
| YP_009209668.1 | NC_028924_p8 | A1 protein | phrog_1745 | DNA transfer protein | other | 1 | 2580 | 4142 |
| YP_009209680.1 | NC_028924_p20 | hypothetical protein | phrog_33709 | unknown function | unknown function | 1 | 11903 | 12106 |
| YP_009209720.1 | NC_028924_p60 | hypothetical protein | phrog_31081 | unknown function | unknown function | -1 | 40567 | 40896 |
| YP_009209674.1 | NC_028924_p14 | hypothetical protein | phrog_7376 | portal protein | head and packaging | 1 | 6898 | 8610 |
| YP_009209722.1 | NC_028924_p62 | hypothetical protein | phrog_37405 | unknown function | unknown function | -1 | 41784 | 42449 |
| YP_009209729.1 | NC_028924_p69 | hypothetical protein | phrog_9957 | unknown function | unknown function | -1 | 43542 | 43931 |
| YP_009209726.1 | NC_028924_p66 | hypothetical protein | phrog_29709 | unknown function | unknown function | -1 | 42974 | 43183 |
| YP_009209737.1 | NC_028924_p77 | hypothetical protein | phrog_28041 | unknown function | unknown function | -1 | 46340 | 46573 |
| YP_009209733.1 | NC_028924_p73 | hypothetical protein | phrog_33157 | unknown function | unknown function | -1 | 45130 | 45339 |
| YP_009209706.1 | NC_028924_p46 | chromosome replication initiation protein DnaA | phrog_30669 | replication initiation protein | DNA, RNA and nucleotide metabolism | -1 | 34903 | 35382 |
| YP_009209677.1 | NC_028924_p17 | hypothetical protein | phrog_7231 | virion structural protein | head and packaging | 1 | 9755 | 10777 |
| YP_009209701.1 | NC_028924_p41 | hypothetical protein | phrog_34143 | unknown function | unknown function | -1 | 32486 | 32638 |
| YP_009209697.1 | NC_028924_p37 | hypothetical protein | singleton | unknown function | unknown function | -1 | 30965 | 31255 |
| YP_009209709.1 | NC_028924_p49 | hypothetical protein | phrog_35617 | unknown function | unknown function | -1 | 35675 | 35863 |
| YP_009209708.1 | NC_028924_p48 | hypothetical protein | phrog_31779 | unknown function | unknown function | -1 | 35470 | 35700 |
| YP_009209661.1 | NC_028924_p1 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 88 | 726 |
| YP_009209683.1 | NC_028924_p23 | hypothetical protein | phrog_6195 | tail protein | tail | 1 | 13709 | 14215 |
| YP_009209693.1 | NC_028924_p33 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 28031 | 28516 |
| YP_009209719.1 | NC_028924_p59 | HNH endonuclease | phrog_2118 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 40062 | 40502 |
| YP_009209664.1 | NC_028924_p4 | hypothetical protein | phrog_38647 | unknown function | unknown function | 1 | 1477 | 1692 |
| YP_009209689.1 | NC_028924_p29 | hypothetical protein | phrog_29238 | unknown function | unknown function | 1 | 23617 | 26610 |