Genomic map of Polaribacter phage P12002L (NC_028924)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028924
Definition
Polaribacter phage P12002L, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Incheonvrus.
DB of origin
REFSEQ
Length
48689
Host Name
Polaribacter
Host domain
Bacteria
Is prophage?
undef
Number of proteins
82
%GC
28.93
Number of singletons
5
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009209685.1 NC_028924_p25 hypothetical protein phrog_32987 unknown function unknown function 1 15356 15982
YP_009209730.1 NC_028924_p70 hypothetical protein phrog_37893 unknown function unknown function -1 43946 44158
YP_009209696.1 NC_028924_p36 DNA methyltransferase phrog_67 DNA methyltransferase other -1 30078 30848
YP_009209715.1 NC_028924_p55 hypothetical protein singleton unknown function unknown function -1 38950 39099
YP_009209666.1 NC_028924_p6 hypothetical protein phrog_38150 unknown function unknown function 1 1965 2288
YP_009209688.1 NC_028924_p28 hypothetical protein phrog_26672 virion structural protein head and packaging 1 21577 23616
YP_009209681.1 NC_028924_p21 hypothetical protein phrog_31902 unknown function unknown function 1 12109 13032
YP_009209703.1 NC_028924_p43 hypothetical protein phrog_26016 unknown function unknown function -1 32933 33700
YP_009209721.1 NC_028924_p61 hypothetical protein phrog_4763 unknown function unknown function -1 41006 41779
YP_009209695.1 NC_028924_p35 DNA methyltransferase phrog_67 DNA methyltransferase other -1 29248 29973
YP_009209694.1 NC_028924_p34 hypothetical protein singleton unknown function unknown function 1 28524 29165
YP_009209690.1 NC_028924_p30 hypothetical protein phrog_16200 unknown function unknown function 1 26628 26915
YP_009209716.1 NC_028924_p56 hypothetical protein phrog_26093 unknown function unknown function -1 39253 39480
YP_009209678.1 NC_028924_p18 hypothetical protein phrog_32171 unknown function unknown function 1 10779 11414
YP_009209717.1 NC_028924_p57 hypothetical protein phrog_31388 unknown function unknown function -1 39530 39664
YP_009209699.1 NC_028924_p39 hypothetical protein singleton unknown function unknown function 1 32098 32271
YP_009209741.1 NC_028924_p81 hypothetical protein phrog_5149 unknown function unknown function -1 47485 47706
YP_009209692.1 NC_028924_p32 hypothetical protein phrog_1768 endolysin lysis 1 27531 27917
YP_009209665.1 NC_028924_p5 hypothetical protein phrog_8898 unknown function unknown function 1 1757 1984
YP_009209682.1 NC_028924_p22 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 13184 13696
YP_009209723.1 NC_028924_p63 hypothetical protein phrog_34476 unknown function unknown function -1 42463 42600
YP_009209728.1 NC_028924_p68 hypothetical protein phrog_30727 unknown function unknown function -1 43380 43541
YP_009209662.1 NC_028924_p2 hypothetical protein phrog_38100 unknown function unknown function 1 1035 1154
YP_009209702.1 NC_028924_p42 hypothetical protein phrog_30810 unknown function unknown function -1 32693 32917
YP_009209712.1 NC_028924_p52 hypothetical protein phrog_35066 unknown function unknown function -1 36951 37199
YP_009209675.1 NC_028924_p15 hypothetical protein phrog_31824 unknown function unknown function 1 8588 8890
YP_009209687.1 NC_028924_p27 hypothetical protein phrog_15220 virion structural protein head and packaging 1 19349 21577
YP_009209671.1 NC_028924_p11 hypothetical protein phrog_36519 unknown function unknown function 1 4609 4782
YP_009209698.1 NC_028924_p38 DNA methyltransferase phrog_67 DNA methyltransferase other -1 31326 32126
YP_009209739.1 NC_028924_p79 hypothetical protein phrog_29413 unknown function unknown function -1 46947 47177
YP_009209713.1 NC_028924_p53 DNA modification protein phrog_1384 Mom-like DNA modification protein other -1 37305 38015
YP_009209725.1 NC_028924_p65 hypothetical protein phrog_28818 unknown function unknown function -1 42827 42970
YP_009209707.1 NC_028924_p47 hypothetical protein singleton unknown function unknown function -1 35372 35503
YP_009209700.1 NC_028924_p40 hypothetical protein phrog_37969 unknown function unknown function -1 32279 32455
YP_009209732.1 NC_028924_p72 hypothetical protein phrog_33541 unknown function unknown function -1 44835 45125
YP_009209734.1 NC_028924_p74 hypothetical protein phrog_35829 unknown function unknown function -1 45442 45774
YP_009209727.1 NC_028924_p67 hypothetical protein phrog_37861 unknown function unknown function -1 43246 43383
YP_009209742.1 NC_028924_p82 hypothetical protein phrog_38475 unknown function unknown function -1 47961 48107
YP_009209669.1 NC_028924_p9 hypothetical protein phrog_36127 unknown function unknown function 1 4201 4401
YP_009209670.1 NC_028924_p10 hypothetical protein phrog_236 nucleotide kinase other 1 4402 4596
YP_009209735.1 NC_028924_p75 hypothetical protein phrog_36701 unknown function unknown function -1 45787 45957
YP_009209679.1 NC_028924_p19 hypothetical protein phrog_29973 unknown function unknown function 1 11368 11901
YP_009209738.1 NC_028924_p78 hypothetical protein phrog_32790 unknown function unknown function -1 46585 46914
YP_009209686.1 NC_028924_p26 tail length tape measure protein phrog_18891 tail length tape measure protein tail 1 15972 19346
YP_009209705.1 NC_028924_p45 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other -1 34489 34893
YP_009209704.1 NC_028924_p44 replication protein phrog_678 replication initiation O-like DNA, RNA and nucleotide metabolism -1 33707 34375
YP_009209667.1 NC_028924_p7 hypothetical protein phrog_34347 unknown function unknown function 1 2257 2454
YP_009209740.1 NC_028924_p80 hypothetical protein phrog_36493 unknown function unknown function -1 47239 47427
YP_009209676.1 NC_028924_p16 hypothetical protein phrog_30432 unknown function unknown function 1 8902 9720
YP_009209714.1 NC_028924_p54 DNA methylase phrog_56 DNA methyltransferase other -1 38118 38816
YP_009209724.1 NC_028924_p64 hypothetical protein phrog_36835 unknown function unknown function -1 42587 42796
YP_009209672.1 NC_028924_p12 hypothetical protein phrog_24909 unknown function unknown function 1 4794 5108
YP_009209731.1 NC_028924_p71 hypothetical protein phrog_29067 unknown function unknown function -1 44162 44821
YP_009209684.1 NC_028924_p24 hypothetical protein phrog_28770 unknown function unknown function -1 14812 15093
YP_009209691.1 NC_028924_p31 hypothetical protein phrog_29276 unknown function unknown function 1 26905 27528
YP_009209673.1 NC_028924_p13 terminase large subunit phrog_2 terminase large subunit head and packaging 1 5260 6801
YP_009209711.1 NC_028924_p51 NinG recombination protein phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism -1 36311 36973
YP_009209718.1 NC_028924_p58 hypothetical protein phrog_30067 unknown function unknown function -1 39708 39995
YP_009209710.1 NC_028924_p50 hypothetical protein phrog_35267 unknown function unknown function -1 35863 36309
YP_009209736.1 NC_028924_p76 hypothetical protein phrog_37806 unknown function unknown function -1 46027 46332
YP_009209663.1 NC_028924_p3 hypothetical protein phrog_8898 unknown function unknown function 1 1289 1474
YP_009209668.1 NC_028924_p8 A1 protein phrog_1745 DNA transfer protein other 1 2580 4142
YP_009209680.1 NC_028924_p20 hypothetical protein phrog_33709 unknown function unknown function 1 11903 12106
YP_009209720.1 NC_028924_p60 hypothetical protein phrog_31081 unknown function unknown function -1 40567 40896
YP_009209674.1 NC_028924_p14 hypothetical protein phrog_7376 portal protein head and packaging 1 6898 8610
YP_009209722.1 NC_028924_p62 hypothetical protein phrog_37405 unknown function unknown function -1 41784 42449
YP_009209729.1 NC_028924_p69 hypothetical protein phrog_9957 unknown function unknown function -1 43542 43931
YP_009209726.1 NC_028924_p66 hypothetical protein phrog_29709 unknown function unknown function -1 42974 43183
YP_009209737.1 NC_028924_p77 hypothetical protein phrog_28041 unknown function unknown function -1 46340 46573
YP_009209733.1 NC_028924_p73 hypothetical protein phrog_33157 unknown function unknown function -1 45130 45339
YP_009209706.1 NC_028924_p46 chromosome replication initiation protein DnaA phrog_30669 replication initiation protein DNA, RNA and nucleotide metabolism -1 34903 35382
YP_009209677.1 NC_028924_p17 hypothetical protein phrog_7231 virion structural protein head and packaging 1 9755 10777
YP_009209701.1 NC_028924_p41 hypothetical protein phrog_34143 unknown function unknown function -1 32486 32638
YP_009209697.1 NC_028924_p37 hypothetical protein singleton unknown function unknown function -1 30965 31255
YP_009209709.1 NC_028924_p49 hypothetical protein phrog_35617 unknown function unknown function -1 35675 35863
YP_009209708.1 NC_028924_p48 hypothetical protein phrog_31779 unknown function unknown function -1 35470 35700
YP_009209661.1 NC_028924_p1 terminase small subunit phrog_51 terminase small subunit head and packaging 1 88 726
YP_009209683.1 NC_028924_p23 hypothetical protein phrog_6195 tail protein tail 1 13709 14215
YP_009209693.1 NC_028924_p33 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 28031 28516
YP_009209719.1 NC_028924_p59 HNH endonuclease phrog_2118 HNH endonuclease DNA, RNA and nucleotide metabolism -1 40062 40502
YP_009209664.1 NC_028924_p4 hypothetical protein phrog_38647 unknown function unknown function 1 1477 1692
YP_009209689.1 NC_028924_p29 hypothetical protein phrog_29238 unknown function unknown function 1 23617 26610