Genomic map of Paenibacillus phage Tripp (NC_028930)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028930
Definition
Paenibacillus phage Tripp, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Trippvirus; Paenibacillus virus Tripp.
DB of origin
REFSEQ
Length
54439
Host Name
Paenibacillus larvae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
92
%GC
48.31
Number of singletons
34
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009210586.1 NC_028930_p66 hypothetical protein phrog_4867 unknown function unknown function 1 40413 40745
YP_009210522.1 NC_028930_p2 hypothetical protein singleton unknown function unknown function 1 772 951
YP_009210526.1 NC_028930_p6 hypothetical protein singleton unknown function unknown function 1 5471 5584
YP_009210534.1 NC_028930_p14 hypothetical protein phrog_18210 unknown function unknown function 1 9367 9744
YP_009210563.1 NC_028930_p43 hypothetical protein singleton unknown function unknown function 1 27127 27453
YP_009210540.1 NC_028930_p20 holin phrog_199 holin lysis 1 17214 17630
YP_009210527.1 NC_028930_p7 scaffold protein phrog_2303 head scaffolding protein head and packaging 1 5587 6222
YP_009210599.1 NC_028930_p79 hypothetical protein phrog_17910 unknown function unknown function 1 46446 47321
YP_009210553.1 NC_028930_p33 repressor-like protein phrog_811 UmuD-like protein DNA, RNA and nucleotide metabolism -1 23130 23612
YP_009210559.1 NC_028930_p39 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 25589 26383
YP_009210602.1 NC_028930_p82 DNA methyltransferase phrog_3820 DNA methyltransferase other 1 48332 49522
YP_009210609.1 NC_028930_p89 hypothetical protein singleton unknown function unknown function 1 52776 52994
YP_009210562.1 NC_028930_p42 hypothetical protein singleton unknown function unknown function 1 26798 27100
YP_009210585.1 NC_028930_p65 DNA polymerase phrog_12241 DNA polymerase DNA, RNA and nucleotide metabolism 1 38756 40411
YP_009210564.1 NC_028930_p44 DNA binding-like protein phrog_12720 DNA binding protein DNA, RNA and nucleotide metabolism 1 27475 27801
YP_009210533.1 NC_028930_p13 hypothetical protein phrog_2175 protein with Ig domain other 1 8767 9315
YP_009210539.1 NC_028930_p19 hypothetical protein singleton unknown function unknown function 1 16789 17226
YP_009210600.1 NC_028930_p80 ATPase-like protein phrog_139 deoxynucleoside monophosphate kinase other 1 47305 47865
YP_009210572.1 NC_028930_p52 DNA replication protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 31148 31918
YP_009210545.1 NC_028930_p25 transposase phrog_33747 transposase integration and excision -1 19376 19606
YP_009210556.1 NC_028930_p36 excisionase-like protein phrog_15534 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 24192 24473
YP_009210590.1 NC_028930_p70 hypothetical protein phrog_1706 CRISPR/Cas system associated DNA, RNA and nucleotide metabolism 1 42854 43714
YP_009210541.1 NC_028930_p21 N-acetylmuramoyl-L-alanine amidase phrog_2742 endolysin lysis 1 17623 18492
YP_009210584.1 NC_028930_p64 hypothetical protein phrog_15694 unknown function unknown function 1 37808 38614
YP_009210532.1 NC_028930_p12 hypothetical protein phrog_10344 minor head protein head and packaging 1 8379 8753
YP_009210611.1 NC_028930_p91 hypothetical protein singleton unknown function unknown function 1 53153 53572
YP_009210598.1 NC_028930_p78 hypothetical protein phrog_1281 unknown function unknown function 1 45978 46442
YP_009210543.1 NC_028930_p23 transposase phrog_4716 transposase integration and excision -1 18845 19213
YP_009210587.1 NC_028930_p67 DNA polymerase phrog_10285 DNA polymerase DNA, RNA and nucleotide metabolism 1 40735 41901
YP_009210605.1 NC_028930_p85 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 50453 50686
YP_009210535.1 NC_028930_p15 hypothetical protein singleton unknown function unknown function 1 9867 10094
YP_009210525.1 NC_028930_p5 minor capsid protein phrog_4611 minor head protein head and packaging 1 4636 5496
YP_009210548.1 NC_028930_p28 hypothetical protein singleton unknown function unknown function -1 20607 20858
YP_009210565.1 NC_028930_p45 hypothetical protein singleton unknown function unknown function 1 27970 28218
YP_009210542.1 NC_028930_p22 hypothetical protein singleton unknown function unknown function 1 18653 18880
YP_009210569.1 NC_028930_p49 DNA methyltransferase-like protein phrog_1733 unknown function unknown function 1 29411 30262
YP_009210555.1 NC_028930_p35 DNA binding-like protein phrog_3 transcriptional repressor transcription regulation 1 23947 24168
YP_009210582.1 NC_028930_p62 hypothetical protein singleton unknown function unknown function 1 37227 37436
YP_009210529.1 NC_028930_p9 hypothetical protein phrog_10959 unknown function unknown function 1 7244 7627
YP_009210537.1 NC_028930_p17 tail protein phrog_202 distal tail protein Dit tail 1 13012 14469
YP_009210588.1 NC_028930_p68 hypothetical protein singleton unknown function unknown function 1 41902 42099
YP_009210547.1 NC_028930_p27 hypothetical protein singleton unknown function unknown function -1 19939 20571
YP_009210552.1 NC_028930_p32 integrase phrog_1 integrase integration and excision -1 21939 23117
YP_009210578.1 NC_028930_p58 hypothetical protein singleton unknown function unknown function 1 36298 36453
YP_009210596.1 NC_028930_p76 metallopeptidase phrog_9897 unknown function unknown function 1 45276 45665
YP_009210523.1 NC_028930_p3 terminase large subunit phrog_38 terminase large subunit head and packaging 1 1350 3116
YP_009210606.1 NC_028930_p86 HicB-like antitoxin phrog_497 toxin-antitoxin system HicB-like moron, auxiliary metabolic gene and host takeover 1 50752 51159
YP_009210554.1 NC_028930_p34 repressor-like domain protein singleton unknown function unknown function -1 23618 23770
YP_009210528.1 NC_028930_p8 major capsid protein phrog_212 major head protein head and packaging 1 6279 7229
YP_009210612.1 NC_028930_p92 DNA binding domain protein phrog_2538 terminase small subunit head and packaging 1 53562 53951
YP_009210550.1 NC_028930_p30 hypothetical protein phrog_34234 unknown function unknown function -1 21268 21654
YP_009210530.1 NC_028930_p10 hypothetical protein phrog_21832 unknown function unknown function 1 7628 7960
YP_009210558.1 NC_028930_p38 hypothetical protein phrog_10141 unknown function unknown function 1 24929 25567
YP_009210566.1 NC_028930_p46 hypothetical protein singleton unknown function unknown function 1 28249 28614
YP_009210604.1 NC_028930_p84 hypothetical protein phrog_13088 unknown function unknown function 1 49904 50362
YP_009210567.1 NC_028930_p47 hypothetical protein phrog_154 replication initiation protein DNA, RNA and nucleotide metabolism 1 28672 29043
YP_009210560.1 NC_028930_p40 hypothetical protein singleton unknown function unknown function 1 26380 26631
YP_009210570.1 NC_028930_p50 hypothetical protein singleton unknown function unknown function 1 30339 30863
YP_009210524.1 NC_028930_p4 portal protein phrog_533 portal protein head and packaging 1 3257 4639
YP_009210549.1 NC_028930_p29 hypothetical protein singleton unknown function unknown function -1 20894 21100
YP_009210579.1 NC_028930_p59 hypothetical protein phrog_1454 unknown function unknown function 1 36466 36681
YP_009210594.1 NC_028930_p74 hypothetical protein singleton unknown function unknown function 1 44828 44989
YP_009210536.1 NC_028930_p16 tape measure phrog_1533 tail length tape measure protein tail 1 10122 13010
YP_009210610.1 NC_028930_p90 hypothetical protein singleton unknown function unknown function 1 52984 53151
YP_009210580.1 NC_028930_p60 hypothetical protein singleton unknown function unknown function 1 36678 36797
YP_009210583.1 NC_028930_p63 hypothetical protein singleton unknown function unknown function 1 37447 37815
YP_009210607.1 NC_028930_p87 hypothetical protein phrog_27153 unknown function unknown function 1 51334 51600
YP_009210574.1 NC_028930_p54 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 33304 34254
YP_009210551.1 NC_028930_p31 hypothetical protein singleton unknown function unknown function -1 21753 21875
YP_009210591.1 NC_028930_p71 resolvase singleton unknown function unknown function 1 43992 44222
YP_009210592.1 NC_028930_p72 hypothetical protein singleton unknown function unknown function 1 44219 44392
YP_009210573.1 NC_028930_p53 helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 31915 33291
YP_009210577.1 NC_028930_p57 single-stranded DNA-binding protein phrog_20486 DNA binding protein DNA, RNA and nucleotide metabolism 1 35547 36284
YP_009210593.1 NC_028930_p73 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 44460 44798
YP_009210603.1 NC_028930_p83 SigK-like protein phrog_3512 sigma factor transcription regulation 1 49510 49914
YP_009210601.1 NC_028930_p81 hypothetical protein phrog_18159 unknown function unknown function -1 47822 48205
YP_009210608.1 NC_028930_p88 hypothetical protein phrog_9501 unknown function unknown function 1 51597 52433
YP_009210575.1 NC_028930_p55 hypothetical protein phrog_24888 unknown function unknown function 1 34307 34870
YP_009210595.1 NC_028930_p75 hypothetical protein phrog_26793 unknown function unknown function 1 45040 45261
YP_009210531.1 NC_028930_p11 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 7957 8382
YP_009210521.1 NC_028930_p1 hypothetical protein singleton unknown function unknown function 1 572 646
YP_009210581.1 NC_028930_p61 hypothetical protein phrog_5018 unknown function unknown function 1 36826 37239
YP_009210568.1 NC_028930_p48 hypothetical protein phrog_6154 unknown function unknown function 1 29027 29395
YP_009210557.1 NC_028930_p37 hypothetical protein singleton unknown function unknown function 1 24586 24888
YP_009210561.1 NC_028930_p41 hypothetical protein singleton unknown function unknown function 1 26628 26801
YP_009210571.1 NC_028930_p51 hypothetical protein singleton unknown function unknown function 1 30874 31146
YP_009210597.1 NC_028930_p77 hypothetical protein singleton unknown function unknown function 1 45667 45984
YP_009210589.1 NC_028930_p69 DNA polymerase III phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 42096 42710
YP_009210544.1 NC_028930_p24 transposase phrog_6657 unknown function unknown function -1 19234 19606
YP_009210576.1 NC_028930_p56 hypothetical protein singleton unknown function unknown function 1 34933 35460
YP_009210546.1 NC_028930_p26 hypothetical protein singleton unknown function unknown function 1 19644 19883
YP_009210538.1 NC_028930_p18 minor tail protein phrog_12312 virion structural protein head and packaging 1 14471 16792