Genomic map of Mycobacterium phage Serenity (NC_028932)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028932
Definition
Mycobacterium phage Serenity, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
52088
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
97
%GC
62.64
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009210690.1 NC_028932_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2328 2624
YP_009210712.1 NC_028932_p26 minor tail protein phrog_110 minor tail protein tail 1 19141 20931
YP_009210699.1 NC_028932_p13 hypothetical protein phrog_233 head scaffolding protein head and packaging 1 10524 11048
YP_009210703.1 NC_028932_p17 head-to-tail connector protein phrog_830 head-tail connector protein connector 1 12667 12861
YP_009210731.1 NC_028932_p45 helix-turn-helix DNA binding domain protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 30842 31249
YP_009210688.1 NC_028932_p2 hypothetical protein phrog_8314 unknown function unknown function 1 1073 2080
YP_009210761.1 NC_028932_p75 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43110 43976
YP_009210765.1 NC_028932_p79 hypothetical protein phrog_14127 unknown function unknown function -1 45496 45753
YP_009210779.1 NC_028932_p93 hypothetical protein phrog_519 unknown function unknown function -1 49592 49753
YP_009210769.1 NC_028932_p83 hypothetical protein phrog_1477 unknown function unknown function -1 46449 46580
YP_009210763.1 NC_028932_p77 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 44466 45017
YP_009210691.1 NC_028932_p5 hypothetical protein phrog_226 minor tail protein tail 1 2661 3128
YP_009210716.1 NC_028932_p30 hypothetical protein phrog_356 minor tail protein tail 1 23522 24121
YP_009210735.1 NC_028932_p49 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 32854 34902
YP_009210767.1 NC_028932_p81 hypothetical protein phrog_1875 unknown function unknown function -1 46016 46222
YP_009210773.1 NC_028932_p87 hypothetical protein phrog_828 unknown function unknown function -1 47767 47970
YP_009210776.1 NC_028932_p90 hypothetical protein phrog_586 unknown function unknown function -1 48730 49110
YP_009210756.1 NC_028932_p70 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41265 42071
YP_009210753.1 NC_028932_p67 hypothetical protein phrog_397 unknown function unknown function -1 40377 40640
YP_009210762.1 NC_028932_p76 hypothetical protein phrog_1562 unknown function unknown function -1 43973 44410
YP_009210713.1 NC_028932_p27 minor tail protein phrog_352 minor tail protein tail 1 20965 21450
YP_009210708.1 NC_028932_p22 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 14766 15589
YP_009210695.1 NC_028932_p9 lysin B phrog_102 endolysin lysis 1 5599 6363
YP_009210719.1 NC_028932_p33 integrase phrog_1 integrase integration and excision -1 24600 25724
YP_009210726.1 NC_028932_p40 hypothetical protein phrog_1545 unknown function unknown function -1 28092 28262
YP_009210755.1 NC_028932_p69 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 40847 41233
YP_009210780.1 NC_028932_p94 hypothetical protein phrog_5452 unknown function unknown function -1 49750 49962
YP_009210702.1 NC_028932_p16 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 12293 12670
YP_009210711.1 NC_028932_p25 minor tail protein phrog_106 minor tail protein tail 1 18134 19144
YP_009210700.1 NC_028932_p14 major capsid protein phrog_10 major head protein head and packaging 1 11078 12034
YP_009210778.1 NC_028932_p92 hypothetical protein phrog_3207 unknown function unknown function -1 49316 49582
YP_009210718.1 NC_028932_p32 hypothetical protein phrog_2570 unknown function unknown function 1 24393 24614
YP_009210782.1 NC_028932_p96 hypothetical protein phrog_1445 unknown function unknown function -1 50452 50529
YP_009210701.1 NC_028932_p15 head-to-tail connector protein phrog_748 head-tail connector protein connector 1 12104 12289
YP_009210738.1 NC_028932_p52 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35272 35976
YP_009210745.1 NC_028932_p59 hypothetical protein phrog_10918 unknown function unknown function -1 38686 38802
YP_009210715.1 NC_028932_p29 minor tail protein phrog_737 minor tail protein tail 1 21771 23522
YP_009210747.1 NC_028932_p61 hypothetical protein phrog_2187 unknown function unknown function -1 39267 39413
YP_009210777.1 NC_028932_p91 hypothetical protein phrog_1946 unknown function unknown function -1 49107 49307
YP_009210740.1 NC_028932_p54 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 36128 36898
YP_009210772.1 NC_028932_p86 hypothetical protein phrog_855 unknown function unknown function -1 47619 47747
YP_009210723.1 NC_028932_p37 hypothetical protein phrog_383 unknown function unknown function -1 27204 27587
YP_009210771.1 NC_028932_p85 hypothetical protein phrog_421 unknown function unknown function -1 46855 47616
YP_009210737.1 NC_028932_p51 hypothetical protein phrog_499 unknown function unknown function -1 35103 35288
YP_009210707.1 NC_028932_p21 major tail protein phrog_117 major tail protein tail 1 14023 14619
YP_009210775.1 NC_028932_p89 hypothetical protein phrog_3256 unknown function unknown function -1 48345 48704
YP_009210709.1 NC_028932_p23 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 14766 15170
YP_009210774.1 NC_028932_p88 hypothetical protein phrog_2223 unknown function unknown function -1 48038 48316
YP_009210754.1 NC_028932_p68 hypothetical protein phrog_542 unknown function unknown function -1 40698 40850
YP_009210736.1 NC_028932_p50 hypothetical protein phrog_2046 unknown function unknown function -1 34903 35106
YP_009210720.1 NC_028932_p34 hypothetical protein phrog_733 excisionase integration and excision 1 26135 26563
YP_009210741.1 NC_028932_p55 hypothetical protein phrog_1167 phosphofructokinase other -1 36895 37359
YP_009210698.1 NC_028932_p12 hypothetical protein phrog_193 head maturation protease head and packaging 1 9740 10471
YP_009210689.1 NC_028932_p3 hypothetical protein phrog_8551 unknown function unknown function 1 2080 2331
YP_009210705.1 NC_028932_p19 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 13229 13564
YP_009210744.1 NC_028932_p58 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37840 38472
YP_009210714.1 NC_028932_p28 minor tail protein phrog_404 minor tail protein tail 1 21447 21770
YP_009210768.1 NC_028932_p82 hypothetical protein phrog_5371 unknown function unknown function -1 46231 46452
YP_009210706.1 NC_028932_p20 head-to-tail connector protein phrog_123 tail terminator connector 1 13574 13993
YP_009210746.1 NC_028932_p60 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 38822 39280
YP_009210742.1 NC_028932_p56 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 37356 37628
YP_009210733.1 NC_028932_p47 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 31464 32189
YP_009210781.1 NC_028932_p95 hypothetical protein phrog_1392 unknown function unknown function -1 49971 50450
YP_009210694.1 NC_028932_p8 holin phrog_526 holin lysis 1 5207 5602
YP_009210722.1 NC_028932_p36 hypothetical protein phrog_229 MazG-like pyrophosphatase other -1 26860 27207
YP_009210725.1 NC_028932_p39 hypothetical protein phrog_3283 unknown function unknown function -1 27865 28092
YP_009210697.1 NC_028932_p11 portal protein phrog_104 portal protein head and packaging 1 8157 9614
YP_009210752.1 NC_028932_p66 hypothetical protein singleton unknown function unknown function -1 40282 40371
YP_009210727.1 NC_028932_p41 hypothetical protein phrog_896 unknown function unknown function -1 28262 28480
YP_009210692.1 NC_028932_p6 minor tail protein phrog_1260 minor tail protein tail 1 3205 4146
YP_009210717.1 NC_028932_p31 hypothetical protein phrog_2269 unknown function unknown function 1 24133 24345
YP_009210760.1 NC_028932_p74 hypothetical protein phrog_642 unknown function unknown function -1 42818 43102
YP_009210770.1 NC_028932_p84 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46580 46855
YP_009210734.1 NC_028932_p48 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 32324 32842
YP_009210730.1 NC_028932_p44 hypothetical protein phrog_2094 unknown function unknown function -1 30507 30842
YP_009210693.1 NC_028932_p7 lysin A phrog_317 endolysin lysis 1 4332 5210
YP_009210739.1 NC_028932_p53 hypothetical protein phrog_2436 unknown function unknown function -1 35973 36131
YP_009210749.1 NC_028932_p63 hypothetical protein phrog_289 GTP-binding domain other -1 39559 39936
YP_009210783.1 NC_028932_p97 hypothetical protein phrog_1676 unknown function unknown function -1 50559 50858
YP_009210748.1 NC_028932_p62 hypothetical protein phrog_1498 unknown function unknown function -1 39410 39562
YP_009210721.1 NC_028932_p35 excise phrog_66 excisionase and transcriptional regulator integration and excision -1 26672 26863
YP_009210764.1 NC_028932_p78 hypothetical protein phrog_2869 unknown function unknown function -1 45312 45494
YP_009210757.1 NC_028932_p71 hypothetical protein phrog_2903 unknown function unknown function -1 42073 42348
YP_009210751.1 NC_028932_p65 hypothetical protein phrog_10332 unknown function unknown function -1 40088 40282
YP_009210696.1 NC_028932_p10 terminase phrog_9 terminase large subunit head and packaging 1 6379 8160
YP_009210732.1 NC_028932_p46 hypothetical protein phrog_690 unknown function unknown function -1 31246 31452
YP_009210759.1 NC_028932_p73 hypothetical protein phrog_666 unknown function unknown function -1 42627 42821
YP_009210710.1 NC_028932_p24 tape measure protein phrog_305 tail length tape measure protein tail 1 15579 18095
YP_009210750.1 NC_028932_p64 hypothetical protein phrog_3369 unknown function unknown function -1 39933 40091
YP_009210729.1 NC_028932_p43 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28668 30497
YP_009210758.1 NC_028932_p72 hypothetical protein phrog_520 unknown function unknown function -1 42359 42637
YP_009210704.1 NC_028932_p18 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 12861 13229
YP_009210766.1 NC_028932_p80 hypothetical protein phrog_3963 unknown function unknown function -1 45750 46019
YP_009210687.1 NC_028932_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 403 1092
YP_009210743.1 NC_028932_p57 hypothetical protein phrog_18377 unknown function unknown function -1 37625 37840
YP_009210724.1 NC_028932_p38 hypothetical protein phrog_2099 unknown function unknown function -1 27584 27868
YP_009210728.1 NC_028932_p42 hypothetical protein phrog_30640 unknown function unknown function -1 28480 28668