Genomic map of Escherichia phage SUSP2 (NC_028935)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028935
Definition
Escherichia phage SUSP2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Suspvirus.
DB of origin
REFSEQ
Length
88698
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
131
%GC
40.15
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009210985.1 NC_028935_p31 hypothetical protein phrog_600 unknown function unknown function 1 22769 23320
YP_009211040.1 NC_028935_p86 head maturation protease phrog_53 head maturation protease head and packaging 1 55618 56964
YP_009210986.1 NC_028935_p32 polynucleotide kinase phrog_3970 polynucleotide kinase other 1 23313 23990
YP_009211082.1 NC_028935_p128 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 83699 86398
YP_009211054.1 NC_028935_p100 hypothetical protein phrog_196 baseplate hub tail 1 66348 67325
YP_009210990.1 NC_028935_p36 hypothetical protein phrog_4391 unknown function unknown function 1 25197 25466
YP_009210997.1 NC_028935_p43 hypothetical protein phrog_5089 unknown function unknown function 1 28363 28620
YP_009211075.1 NC_028935_p121 hypothetical protein phrog_4652 unknown function unknown function -1 79990 80577
YP_009211057.1 NC_028935_p103 baseplate component phrog_6 baseplate wedge subunit tail 1 68367 69836
YP_009210979.1 NC_028935_p25 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other 1 15747 16628
YP_009210960.1 NC_028935_p6 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 3563 4603
YP_009211062.1 NC_028935_p108 hypothetical protein phrog_402 unknown function unknown function 1 74632 74829
YP_009211014.1 NC_028935_p60 hypothetical protein phrog_6279 unknown function unknown function -1 37158 37247
YP_009211047.1 NC_028935_p93 structural protein phrog_205 tail sheath tail 1 60423 61775
YP_009211037.1 NC_028935_p83 hypothetical protein phrog_113 portal protein head and packaging 1 53309 54775
YP_009210987.1 NC_028935_p33 hypothetical protein phrog_2267 unknown function unknown function 1 24003 24467
YP_009210974.1 NC_028935_p20 hypothetical protein phrog_5082 unknown function unknown function 1 13992 14309
YP_009210994.1 NC_028935_p40 phosphatase phrog_335 phosphatase other 1 26146 26928
YP_009210984.1 NC_028935_p30 rIIb phrog_609 RIIB lysis inhibitor lysis 1 21559 22668
YP_009210959.1 NC_028935_p5 hypothetical protein phrog_3877 unknown function unknown function 1 2583 3500
YP_009211027.1 NC_028935_p73 hypothetical protein phrog_5064 unknown function unknown function -1 43120 43353
YP_009211036.1 NC_028935_p82 terminase large subunit phrog_979 terminase large subunit head and packaging 1 51690 53291
YP_009210981.1 NC_028935_p27 hypothetical protein phrog_4262 unknown function unknown function 1 18555 18890
YP_009210969.1 NC_028935_p15 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 10364 10606
YP_009210982.1 NC_028935_p28 hypothetical protein phrog_3931 unknown function unknown function 1 18872 19054
YP_009210971.1 NC_028935_p17 anaerobic nucleoside diphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 10852 12993
YP_009210980.1 NC_028935_p26 nicotinate phosphoribosyltransferase phrog_448 nicotinamide phosphoribosyl transferase other 1 16675 18501
YP_009211033.1 NC_028935_p79 hypothetical protein phrog_2143 unknown function unknown function 1 49319 49876
YP_009211009.1 NC_028935_p55 hypothetical protein phrog_4559 unknown function unknown function 1 33461 33709
YP_009210996.1 NC_028935_p42 hypothetical protein phrog_4495 unknown function unknown function 1 27895 28275
YP_009211034.1 NC_028935_p80 hypothetical protein phrog_2114 unknown function unknown function 1 50334 51068
YP_009211044.1 NC_028935_p90 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 59016 59450
YP_009211066.1 NC_028935_p112 hypothetical protein phrog_2993 unknown function unknown function -1 76680 76949
YP_009211002.1 NC_028935_p48 hypothetical protein phrog_4327 unknown function unknown function 1 30377 30781
YP_009210999.1 NC_028935_p45 hypothetical protein phrog_4401 unknown function unknown function 1 29309 29605
YP_009210970.1 NC_028935_p16 hypothetical protein phrog_4532 unknown function unknown function 1 10599 10805
YP_009211039.1 NC_028935_p85 hypothetical protein phrog_240 head protein head and packaging 1 55275 55607
YP_009211005.1 NC_028935_p51 hypothetical protein phrog_4640 unknown function unknown function 1 31825 32061
YP_009210973.1 NC_028935_p19 anaerobic NTP reductase small subunit phrog_626 anaerobic ribonucleotide reductase small subunit DNA, RNA and nucleotide metabolism 1 13544 14029
YP_009211018.1 NC_028935_p64 hypothetical protein phrog_4109 unknown function unknown function -1 38715 39305
YP_009210963.1 NC_028935_p9 hypothetical protein phrog_2144 MazG-like pyrophosphatase other 1 5307 6062
YP_009211052.1 NC_028935_p98 hypothetical protein phrog_3721 unknown function unknown function 1 65210 66007
YP_009211074.1 NC_028935_p120 hypothetical protein phrog_5926 unknown function unknown function -1 79547 79987
YP_009211051.1 NC_028935_p97 tape measure protein phrog_4036 tail length tape measure protein tail 1 62970 65210
YP_009210961.1 NC_028935_p7 NAD synthetase phrog_447 NAD synthetase other 1 4593 5093
YP_009211064.1 NC_028935_p110 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 75240 76136
YP_009211020.1 NC_028935_p66 hypothetical protein phrog_4385 unknown function unknown function -1 39642 39935
YP_009211019.1 NC_028935_p65 hypothetical protein phrog_4040 unknown function unknown function -1 39305 39649
YP_009211041.1 NC_028935_p87 hypothetical protein phrog_4146 tail protease other 1 56977 57354
YP_009211038.1 NC_028935_p84 hypothetical protein phrog_3977 unknown function unknown function 1 54775 55275
YP_009210964.1 NC_028935_p10 hypothetical protein phrog_4007 unknown function unknown function 1 6043 6366
YP_009210977.1 NC_028935_p23 hypothetical protein phrog_3500 unknown function unknown function 1 14948 15463
YP_009210989.1 NC_028935_p35 hypothetical protein phrog_1152 Rz-like spanin lysis 1 24690 25037
YP_009211042.1 NC_028935_p88 major capsid protein phrog_29 major head protein head and packaging 1 57385 58494
YP_009211003.1 NC_028935_p49 hypothetical protein phrog_9030 unknown function unknown function 1 30869 31117
YP_009211032.1 NC_028935_p78 hypothetical protein phrog_10765 unknown function unknown function 1 49061 49273
YP_009210995.1 NC_028935_p41 hypothetical protein phrog_5293 unknown function unknown function 1 27430 27636
YP_009211078.1 NC_028935_p124 hypothetical protein phrog_4427 unknown function unknown function -1 82450 82656
YP_009210956.1 NC_028935_p2 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 185 2176
YP_009211069.1 NC_028935_p115 hypothetical protein phrog_9143 unknown function unknown function -1 77465 77965
YP_009211017.1 NC_028935_p63 hypothetical protein phrog_5380 unknown function unknown function -1 37950 38636
YP_009210972.1 NC_028935_p18 hypothetical protein phrog_4382 unknown function unknown function 1 13149 13547
YP_009211049.1 NC_028935_p95 hypothetical protein phrog_1613 tail assembly chaperone tail 1 62318 62728
YP_009210993.1 NC_028935_p39 hypothetical protein phrog_2210 unknown function unknown function 1 25944 26144
YP_009211000.1 NC_028935_p46 hypothetical protein phrog_4375 unknown function unknown function 1 29599 29922
YP_009210983.1 NC_028935_p29 rIIa phrog_612 RIIA lysis inhibitor lysis 1 19113 21479
YP_009211024.1 NC_028935_p70 tail protein phrog_3995 tail protein tail -1 41239 42123
YP_009211046.1 NC_028935_p92 hypothetical protein phrog_4082 unknown function unknown function 1 59823 60422
YP_009211004.1 NC_028935_p50 hypothetical protein phrog_3303 unknown function unknown function 1 31204 31761
YP_009211015.1 NC_028935_p61 hypothetical protein phrog_4343 unknown function unknown function -1 37229 37735
YP_009211006.1 NC_028935_p52 hypothetical protein phrog_31746 unknown function unknown function 1 32138 32284
YP_009211077.1 NC_028935_p123 hypothetical protein phrog_5768 unknown function unknown function -1 82262 82453
YP_009211022.1 NC_028935_p68 hypothetical protein phrog_4266 unknown function unknown function -1 40323 40733
YP_009211012.1 NC_028935_p58 hypothetical protein phrog_7193 unknown function unknown function -1 36458 36874
YP_009211011.1 NC_028935_p57 hypothetical protein phrog_4713 unknown function unknown function -1 35994 36461
YP_009211080.1 NC_028935_p126 hypothetical protein phrog_4230 unknown function unknown function -1 82897 83109
YP_009210955.1 NC_028935_p1 hypothetical protein phrog_4469 unknown function unknown function 1 1 192
YP_009211072.1 NC_028935_p118 hypothetical protein phrog_4473 unknown function unknown function -1 78603 78806
YP_009211067.1 NC_028935_p113 hypothetical protein singleton unknown function unknown function -1 76946 77152
YP_009210962.1 NC_028935_p8 hypothetical protein phrog_4442 unknown function unknown function 1 5080 5307
YP_009211045.1 NC_028935_p91 hypothetical protein phrog_2874 unknown function unknown function 1 59447 59848
YP_009211081.1 NC_028935_p127 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 83161 83688
YP_009211008.1 NC_028935_p54 hypothetical protein phrog_4725 unknown function unknown function 1 32876 33403
YP_009210998.1 NC_028935_p44 hypothetical protein phrog_4190 unknown function unknown function 1 28708 29220
YP_009211050.1 NC_028935_p96 hypothetical protein phrog_4963 tail assembly chaperone tail 1 62731 62970
YP_009211085.1 NC_028935_p131 deoxynucleotide monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other 1 87944 88687
YP_009211070.1 NC_028935_p116 hypothetical protein phrog_4116 unknown function unknown function -1 77950 78309
YP_009211083.1 NC_028935_p129 hypothetical protein phrog_4039 unknown function unknown function 1 86656 87078
YP_009210991.1 NC_028935_p37 hypothetical protein phrog_26590 unknown function unknown function 1 25468 25641
YP_009211071.1 NC_028935_p117 transcriptional regulatory protein phrog_1373 transcriptional regulator transcription regulation -1 78311 78610
YP_009211076.1 NC_028935_p122 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 81159 82262
YP_009210978.1 NC_028935_p24 hypothetical protein phrog_4726 unknown function unknown function 1 15456 15734
YP_009211084.1 NC_028935_p130 minor tail protein phrog_4251 minor tail protein tail 1 87080 87883
YP_009211013.1 NC_028935_p59 hypothetical protein phrog_4457 unknown function unknown function -1 36927 37154
YP_009211010.1 NC_028935_p56 hypothetical protein phrog_4330 unknown function unknown function -1 35377 35988
YP_009211055.1 NC_028935_p101 hypothetical protein phrog_11 baseplate spike tail 1 67346 67948
YP_009211058.1 NC_028935_p104 hypothetical protein phrog_4017 baseplate protein tail 1 69839 70696
YP_009211068.1 NC_028935_p114 hypothetical protein singleton unknown function unknown function -1 77161 77463
YP_009211073.1 NC_028935_p119 hypothetical protein phrog_4332 unknown function unknown function -1 78808 79188
YP_009211060.1 NC_028935_p106 tail fiber protein phrog_2097 tail fiber protein tail 1 71013 72161
YP_009210968.1 NC_028935_p14 ribonucleoside triphosphate reductase small subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 9291 10364
YP_009210957.1 NC_028935_p3 hypothetical protein phrog_4982 unknown function unknown function 1 2151 2429
YP_009210967.1 NC_028935_p13 hypothetical protein phrog_2652 unknown function unknown function 1 9019 9294
YP_009211059.1 NC_028935_p105 hypothetical protein phrog_4141 unknown function unknown function 1 70696 71010
YP_009211061.1 NC_028935_p107 tail fiber protein phrog_4277 tail fiber protein tail 1 72204 74552
YP_009211021.1 NC_028935_p67 hypothetical protein phrog_4348 unknown function unknown function -1 39935 40330
YP_009211053.1 NC_028935_p99 hypothetical protein phrog_349 virion structural protein head and packaging 1 66007 66348
YP_009211063.1 NC_028935_p109 holin phrog_4038 unknown function unknown function 1 74826 75200
YP_009211035.1 NC_028935_p81 hypothetical protein phrog_4397 unknown function unknown function 1 51468 51668
YP_009210965.1 NC_028935_p11 hypothetical protein phrog_3358 unknown function unknown function 1 6359 6694
YP_009211043.1 NC_028935_p89 hypothetical protein phrog_1732 unknown function unknown function 1 58516 58968
YP_009210992.1 NC_028935_p38 hypothetical protein phrog_4453 unknown function unknown function 1 25625 25951
YP_009211029.1 NC_028935_p75 hypothetical protein phrog_4114 unknown function unknown function 1 43745 44116
YP_009211025.1 NC_028935_p71 hypothetical protein phrog_4463 unknown function unknown function -1 42116 42490
YP_009211001.1 NC_028935_p47 hypothetical protein phrog_3436 unknown function unknown function 1 30016 30288
YP_009210975.1 NC_028935_p21 hypothetical protein phrog_4425 unknown function unknown function 1 14327 14572
YP_009211048.1 NC_028935_p94 hypothetical protein phrog_280 virion structural protein head and packaging 1 61791 62237
YP_009210966.1 NC_028935_p12 ribonucleoside triphosphate reductase large subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 6747 8981
YP_009210988.1 NC_028935_p34 hypothetical protein singleton unknown function unknown function 1 24519 24677
YP_009211007.1 NC_028935_p53 hypothetical protein phrog_4318 unknown function unknown function 1 32333 32674
YP_009210976.1 NC_028935_p22 hypothetical protein phrog_4462 unknown function unknown function 1 14584 14895
YP_009211031.1 NC_028935_p77 hypothetical protein phrog_38494 unknown function unknown function 1 46064 46234
YP_009211065.1 NC_028935_p111 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 76138 76683
YP_009211030.1 NC_028935_p76 hypothetical protein phrog_850 RNA-binding protein DNA, RNA and nucleotide metabolism 1 44197 45612
YP_009211016.1 NC_028935_p62 hypothetical protein phrog_4459 unknown function unknown function -1 37732 37953
YP_009211023.1 NC_028935_p69 lysin phrog_7 endolysin lysis -1 40772 41236
YP_009211056.1 NC_028935_p102 hypothetical protein phrog_120 baseplate wedge subunit tail 1 67948 68367
YP_009211026.1 NC_028935_p72 hypothetical protein phrog_4034 unknown function unknown function -1 42536 43126
YP_009211079.1 NC_028935_p125 hypothetical protein phrog_3474 unknown function unknown function -1 82666 82878
YP_009211028.1 NC_028935_p74 hypothetical protein phrog_8138 unknown function unknown function -1 43335 43496
YP_009210958.1 NC_028935_p4 hypothetical protein phrog_4424 unknown function unknown function 1 2426 2563