| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028935 |
Definition |
Escherichia phage SUSP2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Ounavirinae; Suspvirus. |
DB of origin |
REFSEQ |
Length |
88698 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
131 |
%GC |
40.15 |
Number of singletons |
3 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009210985.1 | NC_028935_p31 | hypothetical protein | phrog_600 | unknown function | unknown function | 1 | 22769 | 23320 |
| YP_009211040.1 | NC_028935_p86 | head maturation protease | phrog_53 | head maturation protease | head and packaging | 1 | 55618 | 56964 |
| YP_009210986.1 | NC_028935_p32 | polynucleotide kinase | phrog_3970 | polynucleotide kinase | other | 1 | 23313 | 23990 |
| YP_009211082.1 | NC_028935_p128 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 83699 | 86398 |
| YP_009211054.1 | NC_028935_p100 | hypothetical protein | phrog_196 | baseplate hub | tail | 1 | 66348 | 67325 |
| YP_009210990.1 | NC_028935_p36 | hypothetical protein | phrog_4391 | unknown function | unknown function | 1 | 25197 | 25466 |
| YP_009210997.1 | NC_028935_p43 | hypothetical protein | phrog_5089 | unknown function | unknown function | 1 | 28363 | 28620 |
| YP_009211075.1 | NC_028935_p121 | hypothetical protein | phrog_4652 | unknown function | unknown function | -1 | 79990 | 80577 |
| YP_009211057.1 | NC_028935_p103 | baseplate component | phrog_6 | baseplate wedge subunit | tail | 1 | 68367 | 69836 |
| YP_009210979.1 | NC_028935_p25 | ribose-phosphate pyrophosphokinase | phrog_619 | ribose-phosphate pyrophosphokinase | other | 1 | 15747 | 16628 |
| YP_009210960.1 | NC_028935_p6 | exodeoxyribonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 3563 | 4603 |
| YP_009211062.1 | NC_028935_p108 | hypothetical protein | phrog_402 | unknown function | unknown function | 1 | 74632 | 74829 |
| YP_009211014.1 | NC_028935_p60 | hypothetical protein | phrog_6279 | unknown function | unknown function | -1 | 37158 | 37247 |
| YP_009211047.1 | NC_028935_p93 | structural protein | phrog_205 | tail sheath | tail | 1 | 60423 | 61775 |
| YP_009211037.1 | NC_028935_p83 | hypothetical protein | phrog_113 | portal protein | head and packaging | 1 | 53309 | 54775 |
| YP_009210987.1 | NC_028935_p33 | hypothetical protein | phrog_2267 | unknown function | unknown function | 1 | 24003 | 24467 |
| YP_009210974.1 | NC_028935_p20 | hypothetical protein | phrog_5082 | unknown function | unknown function | 1 | 13992 | 14309 |
| YP_009210994.1 | NC_028935_p40 | phosphatase | phrog_335 | phosphatase | other | 1 | 26146 | 26928 |
| YP_009210984.1 | NC_028935_p30 | rIIb | phrog_609 | RIIB lysis inhibitor | lysis | 1 | 21559 | 22668 |
| YP_009210959.1 | NC_028935_p5 | hypothetical protein | phrog_3877 | unknown function | unknown function | 1 | 2583 | 3500 |
| YP_009211027.1 | NC_028935_p73 | hypothetical protein | phrog_5064 | unknown function | unknown function | -1 | 43120 | 43353 |
| YP_009211036.1 | NC_028935_p82 | terminase large subunit | phrog_979 | terminase large subunit | head and packaging | 1 | 51690 | 53291 |
| YP_009210981.1 | NC_028935_p27 | hypothetical protein | phrog_4262 | unknown function | unknown function | 1 | 18555 | 18890 |
| YP_009210969.1 | NC_028935_p15 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 10364 | 10606 |
| YP_009210982.1 | NC_028935_p28 | hypothetical protein | phrog_3931 | unknown function | unknown function | 1 | 18872 | 19054 |
| YP_009210971.1 | NC_028935_p17 | anaerobic nucleoside diphosphate reductase | phrog_487 | NrdD-like anaerobic ribonucleotide reductase large subunit | moron, auxiliary metabolic gene and host takeover | 1 | 10852 | 12993 |
| YP_009210980.1 | NC_028935_p26 | nicotinate phosphoribosyltransferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | 1 | 16675 | 18501 |
| YP_009211033.1 | NC_028935_p79 | hypothetical protein | phrog_2143 | unknown function | unknown function | 1 | 49319 | 49876 |
| YP_009211009.1 | NC_028935_p55 | hypothetical protein | phrog_4559 | unknown function | unknown function | 1 | 33461 | 33709 |
| YP_009210996.1 | NC_028935_p42 | hypothetical protein | phrog_4495 | unknown function | unknown function | 1 | 27895 | 28275 |
| YP_009211034.1 | NC_028935_p80 | hypothetical protein | phrog_2114 | unknown function | unknown function | 1 | 50334 | 51068 |
| YP_009211044.1 | NC_028935_p90 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | 1 | 59016 | 59450 |
| YP_009211066.1 | NC_028935_p112 | hypothetical protein | phrog_2993 | unknown function | unknown function | -1 | 76680 | 76949 |
| YP_009211002.1 | NC_028935_p48 | hypothetical protein | phrog_4327 | unknown function | unknown function | 1 | 30377 | 30781 |
| YP_009210999.1 | NC_028935_p45 | hypothetical protein | phrog_4401 | unknown function | unknown function | 1 | 29309 | 29605 |
| YP_009210970.1 | NC_028935_p16 | hypothetical protein | phrog_4532 | unknown function | unknown function | 1 | 10599 | 10805 |
| YP_009211039.1 | NC_028935_p85 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 55275 | 55607 |
| YP_009211005.1 | NC_028935_p51 | hypothetical protein | phrog_4640 | unknown function | unknown function | 1 | 31825 | 32061 |
| YP_009210973.1 | NC_028935_p19 | anaerobic NTP reductase small subunit | phrog_626 | anaerobic ribonucleotide reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 13544 | 14029 |
| YP_009211018.1 | NC_028935_p64 | hypothetical protein | phrog_4109 | unknown function | unknown function | -1 | 38715 | 39305 |
| YP_009210963.1 | NC_028935_p9 | hypothetical protein | phrog_2144 | MazG-like pyrophosphatase | other | 1 | 5307 | 6062 |
| YP_009211052.1 | NC_028935_p98 | hypothetical protein | phrog_3721 | unknown function | unknown function | 1 | 65210 | 66007 |
| YP_009211074.1 | NC_028935_p120 | hypothetical protein | phrog_5926 | unknown function | unknown function | -1 | 79547 | 79987 |
| YP_009211051.1 | NC_028935_p97 | tape measure protein | phrog_4036 | tail length tape measure protein | tail | 1 | 62970 | 65210 |
| YP_009210961.1 | NC_028935_p7 | NAD synthetase | phrog_447 | NAD synthetase | other | 1 | 4593 | 5093 |
| YP_009211064.1 | NC_028935_p110 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 75240 | 76136 |
| YP_009211020.1 | NC_028935_p66 | hypothetical protein | phrog_4385 | unknown function | unknown function | -1 | 39642 | 39935 |
| YP_009211019.1 | NC_028935_p65 | hypothetical protein | phrog_4040 | unknown function | unknown function | -1 | 39305 | 39649 |
| YP_009211041.1 | NC_028935_p87 | hypothetical protein | phrog_4146 | tail protease | other | 1 | 56977 | 57354 |
| YP_009211038.1 | NC_028935_p84 | hypothetical protein | phrog_3977 | unknown function | unknown function | 1 | 54775 | 55275 |
| YP_009210964.1 | NC_028935_p10 | hypothetical protein | phrog_4007 | unknown function | unknown function | 1 | 6043 | 6366 |
| YP_009210977.1 | NC_028935_p23 | hypothetical protein | phrog_3500 | unknown function | unknown function | 1 | 14948 | 15463 |
| YP_009210989.1 | NC_028935_p35 | hypothetical protein | phrog_1152 | Rz-like spanin | lysis | 1 | 24690 | 25037 |
| YP_009211042.1 | NC_028935_p88 | major capsid protein | phrog_29 | major head protein | head and packaging | 1 | 57385 | 58494 |
| YP_009211003.1 | NC_028935_p49 | hypothetical protein | phrog_9030 | unknown function | unknown function | 1 | 30869 | 31117 |
| YP_009211032.1 | NC_028935_p78 | hypothetical protein | phrog_10765 | unknown function | unknown function | 1 | 49061 | 49273 |
| YP_009210995.1 | NC_028935_p41 | hypothetical protein | phrog_5293 | unknown function | unknown function | 1 | 27430 | 27636 |
| YP_009211078.1 | NC_028935_p124 | hypothetical protein | phrog_4427 | unknown function | unknown function | -1 | 82450 | 82656 |
| YP_009210956.1 | NC_028935_p2 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 185 | 2176 |
| YP_009211069.1 | NC_028935_p115 | hypothetical protein | phrog_9143 | unknown function | unknown function | -1 | 77465 | 77965 |
| YP_009211017.1 | NC_028935_p63 | hypothetical protein | phrog_5380 | unknown function | unknown function | -1 | 37950 | 38636 |
| YP_009210972.1 | NC_028935_p18 | hypothetical protein | phrog_4382 | unknown function | unknown function | 1 | 13149 | 13547 |
| YP_009211049.1 | NC_028935_p95 | hypothetical protein | phrog_1613 | tail assembly chaperone | tail | 1 | 62318 | 62728 |
| YP_009210993.1 | NC_028935_p39 | hypothetical protein | phrog_2210 | unknown function | unknown function | 1 | 25944 | 26144 |
| YP_009211000.1 | NC_028935_p46 | hypothetical protein | phrog_4375 | unknown function | unknown function | 1 | 29599 | 29922 |
| YP_009210983.1 | NC_028935_p29 | rIIa | phrog_612 | RIIA lysis inhibitor | lysis | 1 | 19113 | 21479 |
| YP_009211024.1 | NC_028935_p70 | tail protein | phrog_3995 | tail protein | tail | -1 | 41239 | 42123 |
| YP_009211046.1 | NC_028935_p92 | hypothetical protein | phrog_4082 | unknown function | unknown function | 1 | 59823 | 60422 |
| YP_009211004.1 | NC_028935_p50 | hypothetical protein | phrog_3303 | unknown function | unknown function | 1 | 31204 | 31761 |
| YP_009211015.1 | NC_028935_p61 | hypothetical protein | phrog_4343 | unknown function | unknown function | -1 | 37229 | 37735 |
| YP_009211006.1 | NC_028935_p52 | hypothetical protein | phrog_31746 | unknown function | unknown function | 1 | 32138 | 32284 |
| YP_009211077.1 | NC_028935_p123 | hypothetical protein | phrog_5768 | unknown function | unknown function | -1 | 82262 | 82453 |
| YP_009211022.1 | NC_028935_p68 | hypothetical protein | phrog_4266 | unknown function | unknown function | -1 | 40323 | 40733 |
| YP_009211012.1 | NC_028935_p58 | hypothetical protein | phrog_7193 | unknown function | unknown function | -1 | 36458 | 36874 |
| YP_009211011.1 | NC_028935_p57 | hypothetical protein | phrog_4713 | unknown function | unknown function | -1 | 35994 | 36461 |
| YP_009211080.1 | NC_028935_p126 | hypothetical protein | phrog_4230 | unknown function | unknown function | -1 | 82897 | 83109 |
| YP_009210955.1 | NC_028935_p1 | hypothetical protein | phrog_4469 | unknown function | unknown function | 1 | 1 | 192 |
| YP_009211072.1 | NC_028935_p118 | hypothetical protein | phrog_4473 | unknown function | unknown function | -1 | 78603 | 78806 |
| YP_009211067.1 | NC_028935_p113 | hypothetical protein | singleton | unknown function | unknown function | -1 | 76946 | 77152 |
| YP_009210962.1 | NC_028935_p8 | hypothetical protein | phrog_4442 | unknown function | unknown function | 1 | 5080 | 5307 |
| YP_009211045.1 | NC_028935_p91 | hypothetical protein | phrog_2874 | unknown function | unknown function | 1 | 59447 | 59848 |
| YP_009211081.1 | NC_028935_p127 | homing endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 83161 | 83688 |
| YP_009211008.1 | NC_028935_p54 | hypothetical protein | phrog_4725 | unknown function | unknown function | 1 | 32876 | 33403 |
| YP_009210998.1 | NC_028935_p44 | hypothetical protein | phrog_4190 | unknown function | unknown function | 1 | 28708 | 29220 |
| YP_009211050.1 | NC_028935_p96 | hypothetical protein | phrog_4963 | tail assembly chaperone | tail | 1 | 62731 | 62970 |
| YP_009211085.1 | NC_028935_p131 | deoxynucleotide monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 87944 | 88687 |
| YP_009211070.1 | NC_028935_p116 | hypothetical protein | phrog_4116 | unknown function | unknown function | -1 | 77950 | 78309 |
| YP_009211083.1 | NC_028935_p129 | hypothetical protein | phrog_4039 | unknown function | unknown function | 1 | 86656 | 87078 |
| YP_009210991.1 | NC_028935_p37 | hypothetical protein | phrog_26590 | unknown function | unknown function | 1 | 25468 | 25641 |
| YP_009211071.1 | NC_028935_p117 | transcriptional regulatory protein | phrog_1373 | transcriptional regulator | transcription regulation | -1 | 78311 | 78610 |
| YP_009211076.1 | NC_028935_p122 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 81159 | 82262 |
| YP_009210978.1 | NC_028935_p24 | hypothetical protein | phrog_4726 | unknown function | unknown function | 1 | 15456 | 15734 |
| YP_009211084.1 | NC_028935_p130 | minor tail protein | phrog_4251 | minor tail protein | tail | 1 | 87080 | 87883 |
| YP_009211013.1 | NC_028935_p59 | hypothetical protein | phrog_4457 | unknown function | unknown function | -1 | 36927 | 37154 |
| YP_009211010.1 | NC_028935_p56 | hypothetical protein | phrog_4330 | unknown function | unknown function | -1 | 35377 | 35988 |
| YP_009211055.1 | NC_028935_p101 | hypothetical protein | phrog_11 | baseplate spike | tail | 1 | 67346 | 67948 |
| YP_009211058.1 | NC_028935_p104 | hypothetical protein | phrog_4017 | baseplate protein | tail | 1 | 69839 | 70696 |
| YP_009211068.1 | NC_028935_p114 | hypothetical protein | singleton | unknown function | unknown function | -1 | 77161 | 77463 |
| YP_009211073.1 | NC_028935_p119 | hypothetical protein | phrog_4332 | unknown function | unknown function | -1 | 78808 | 79188 |
| YP_009211060.1 | NC_028935_p106 | tail fiber protein | phrog_2097 | tail fiber protein | tail | 1 | 71013 | 72161 |
| YP_009210968.1 | NC_028935_p14 | ribonucleoside triphosphate reductase small subunit | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 9291 | 10364 |
| YP_009210957.1 | NC_028935_p3 | hypothetical protein | phrog_4982 | unknown function | unknown function | 1 | 2151 | 2429 |
| YP_009210967.1 | NC_028935_p13 | hypothetical protein | phrog_2652 | unknown function | unknown function | 1 | 9019 | 9294 |
| YP_009211059.1 | NC_028935_p105 | hypothetical protein | phrog_4141 | unknown function | unknown function | 1 | 70696 | 71010 |
| YP_009211061.1 | NC_028935_p107 | tail fiber protein | phrog_4277 | tail fiber protein | tail | 1 | 72204 | 74552 |
| YP_009211021.1 | NC_028935_p67 | hypothetical protein | phrog_4348 | unknown function | unknown function | -1 | 39935 | 40330 |
| YP_009211053.1 | NC_028935_p99 | hypothetical protein | phrog_349 | virion structural protein | head and packaging | 1 | 66007 | 66348 |
| YP_009211063.1 | NC_028935_p109 | holin | phrog_4038 | unknown function | unknown function | 1 | 74826 | 75200 |
| YP_009211035.1 | NC_028935_p81 | hypothetical protein | phrog_4397 | unknown function | unknown function | 1 | 51468 | 51668 |
| YP_009210965.1 | NC_028935_p11 | hypothetical protein | phrog_3358 | unknown function | unknown function | 1 | 6359 | 6694 |
| YP_009211043.1 | NC_028935_p89 | hypothetical protein | phrog_1732 | unknown function | unknown function | 1 | 58516 | 58968 |
| YP_009210992.1 | NC_028935_p38 | hypothetical protein | phrog_4453 | unknown function | unknown function | 1 | 25625 | 25951 |
| YP_009211029.1 | NC_028935_p75 | hypothetical protein | phrog_4114 | unknown function | unknown function | 1 | 43745 | 44116 |
| YP_009211025.1 | NC_028935_p71 | hypothetical protein | phrog_4463 | unknown function | unknown function | -1 | 42116 | 42490 |
| YP_009211001.1 | NC_028935_p47 | hypothetical protein | phrog_3436 | unknown function | unknown function | 1 | 30016 | 30288 |
| YP_009210975.1 | NC_028935_p21 | hypothetical protein | phrog_4425 | unknown function | unknown function | 1 | 14327 | 14572 |
| YP_009211048.1 | NC_028935_p94 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | 1 | 61791 | 62237 |
| YP_009210966.1 | NC_028935_p12 | ribonucleoside triphosphate reductase large subunit | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 6747 | 8981 |
| YP_009210988.1 | NC_028935_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24519 | 24677 |
| YP_009211007.1 | NC_028935_p53 | hypothetical protein | phrog_4318 | unknown function | unknown function | 1 | 32333 | 32674 |
| YP_009210976.1 | NC_028935_p22 | hypothetical protein | phrog_4462 | unknown function | unknown function | 1 | 14584 | 14895 |
| YP_009211031.1 | NC_028935_p77 | hypothetical protein | phrog_38494 | unknown function | unknown function | 1 | 46064 | 46234 |
| YP_009211065.1 | NC_028935_p111 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | -1 | 76138 | 76683 |
| YP_009211030.1 | NC_028935_p76 | hypothetical protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 44197 | 45612 |
| YP_009211016.1 | NC_028935_p62 | hypothetical protein | phrog_4459 | unknown function | unknown function | -1 | 37732 | 37953 |
| YP_009211023.1 | NC_028935_p69 | lysin | phrog_7 | endolysin | lysis | -1 | 40772 | 41236 |
| YP_009211056.1 | NC_028935_p102 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | 1 | 67948 | 68367 |
| YP_009211026.1 | NC_028935_p72 | hypothetical protein | phrog_4034 | unknown function | unknown function | -1 | 42536 | 43126 |
| YP_009211079.1 | NC_028935_p125 | hypothetical protein | phrog_3474 | unknown function | unknown function | -1 | 82666 | 82878 |
| YP_009211028.1 | NC_028935_p74 | hypothetical protein | phrog_8138 | unknown function | unknown function | -1 | 43335 | 43496 |
| YP_009210958.1 | NC_028935_p4 | hypothetical protein | phrog_4424 | unknown function | unknown function | 1 | 2426 | 2563 |