Genomic map of Mycobacterium phage Enkosi (NC_028936)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028936
Definition
Mycobacterium phage Enkosi, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
REFSEQ
Length
59052
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
67.18
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009211113.1 NC_028936_p28 holin phrog_565 holin lysis 1 26747 27205
YP_009211135.1 NC_028936_p50 hypothetical protein phrog_1956 unknown function unknown function 1 40358 40645
YP_009211114.1 NC_028936_p29 hypothetical protein phrog_3413 unknown function unknown function 1 27202 27549
YP_009211105.1 NC_028936_p20 minor tail protein phrog_1697 minor tail protein tail 1 18463 18939
YP_009211151.1 NC_028936_p66 hypothetical protein phrog_7536 unknown function unknown function 1 50755 50931
YP_009211132.1 NC_028936_p47 HTH DNA binding protein phrog_2286 unknown function unknown function 1 38838 39656
YP_009211108.1 NC_028936_p23 minor tail protein phrog_746 minor tail protein tail 1 20414 22900
YP_009211126.1 NC_028936_p41 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 36742 37140
YP_009211094.1 NC_028936_p9 major capsid protein phrog_10 major head protein head and packaging 1 7225 8145
YP_009211099.1 NC_028936_p14 major tail protein phrog_117 major tail protein tail 1 9777 10388
YP_009211103.1 NC_028936_p18 minor tail protein phrog_106 minor tail protein tail 1 15554 16696
YP_009211157.1 NC_028936_p72 hypothetical protein phrog_3665 unknown function unknown function 1 55031 55189
YP_009211091.1 NC_028936_p6 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 3784 6339
YP_009211130.1 NC_028936_p45 hypothetical protein phrog_2654 unknown function unknown function 1 38465 38641
YP_009211092.1 NC_028936_p7 hypothetical protein phrog_1757 unknown function unknown function 1 6336 6524
YP_009211112.1 NC_028936_p27 lysin B phrog_102 endolysin lysis 1 25978 26736
YP_009211138.1 NC_028936_p53 hypothetical protein phrog_3492 unknown function unknown function 1 42092 42286
YP_009211123.1 NC_028936_p38 transporter-like protein phrog_2034 unknown function unknown function -1 32314 33684
YP_009211101.1 NC_028936_p16 tail assembly chaperone phrog_1861 unknown function unknown function 1 10504 10920
YP_009211097.1 NC_028936_p12 head-to-tail connector phrog_387 neck protein connector 1 8985 9266
YP_009211137.1 NC_028936_p52 hypothetical protein phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 41208 42095
YP_009211164.1 NC_028936_p79 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 58687 58992
YP_009211100.1 NC_028936_p15 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 10504 11327
YP_009211141.1 NC_028936_p56 hypothetical protein phrog_1911 unknown function unknown function 1 42937 43458
YP_009211144.1 NC_028936_p59 DNA primase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 44207 46804
YP_009211107.1 NC_028936_p22 minor tail protein phrog_1736 minor tail protein tail 1 20111 20413
YP_009211125.1 NC_028936_p40 hypothetical protein phrog_950 unknown function unknown function -1 35793 36695
YP_009211118.1 NC_028936_p33 hypothetical protein phrog_11692 unknown function unknown function 1 29526 29681
YP_009211116.1 NC_028936_p31 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 27784 28920
YP_009211139.1 NC_028936_p54 hypothetical protein singleton unknown function unknown function 1 42534 42737
YP_009211121.1 NC_028936_p36 hypothetical protein phrog_4716 transposase integration and excision -1 31388 32227
YP_009211102.1 NC_028936_p17 tape measure protein phrog_971 endolysin lysis 1 11327 15460
YP_009211117.1 NC_028936_p32 hypothetical protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29116 29529
YP_009211156.1 NC_028936_p71 hypothetical protein phrog_2493 unknown function unknown function 1 54478 55038
YP_009211146.1 NC_028936_p61 hypothetical protein phrog_3478 unknown function unknown function 1 47941 48351
YP_009211106.1 NC_028936_p21 minor tail protein phrog_1565 minor tail protein tail 1 19023 20105
YP_009211154.1 NC_028936_p69 RctB RNA ligase phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 52645 53838
YP_009211110.1 NC_028936_p25 hypothetical protein phrog_240 head protein head and packaging 1 23944 24318
YP_009211095.1 NC_028936_p10 head-to-tail connector phrog_137 head-tail adaptor Ad1 connector 1 8266 8649
YP_009211155.1 NC_028936_p70 hypothetical protein phrog_2822 unknown function unknown function 1 53841 54485
YP_009211133.1 NC_028936_p48 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 39653 39922
YP_009211162.1 NC_028936_p77 DNA binding domain protein phrog_4095 unknown function unknown function 1 57382 58083
YP_009211124.1 NC_028936_p39 integrase phrog_1 integrase integration and excision 1 34589 35683
YP_009211134.1 NC_028936_p49 hypothetical protein phrog_2781 unknown function unknown function 1 39919 40344
YP_009211147.1 NC_028936_p62 hypothetical protein phrog_908 unknown function unknown function 1 48348 49529
YP_009211098.1 NC_028936_p13 head-to-tail connector phrog_123 tail terminator connector 1 9269 9688
YP_009211089.1 NC_028936_p4 terminase large subunit phrog_2 terminase large subunit head and packaging 1 847 2271
YP_009211129.1 NC_028936_p44 hypothetical protein phrog_6733 unknown function unknown function 1 38238 38468
YP_009211150.1 NC_028936_p65 hypothetical protein phrog_2287 unknown function unknown function 1 50166 50666
YP_009211086.1 NC_028936_p1 hypothetical protein singleton unknown function unknown function 1 75 353
YP_009211096.1 NC_028936_p11 head-to-tail connector phrog_763 head-tail adaptor connector 1 8651 9004
YP_009211145.1 NC_028936_p60 hypothetical protein phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47238 47948
YP_009211111.1 NC_028936_p26 lysin A phrog_317 endolysin lysis 1 24344 25981
YP_009211149.1 NC_028936_p64 hypothetical protein phrog_1338 unknown function unknown function 1 49769 50041
YP_009211153.1 NC_028936_p68 hypothetical protein singleton unknown function unknown function 1 51794 52522
YP_009211120.1 NC_028936_p35 hypothetical protein phrog_1279 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 30629 31555
YP_009211136.1 NC_028936_p51 DnaQ exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40660 41211
YP_009211093.1 NC_028936_p8 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 6589 7137
YP_009211088.1 NC_028936_p3 terminase small subunit phrog_1459 terminase small subunit head and packaging 1 636 863
YP_009211142.1 NC_028936_p57 NrdH glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 43554 43799
YP_009211160.1 NC_028936_p75 YcfA-like family protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 56398 56613
YP_009211143.1 NC_028936_p58 HNH endonuclease phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43796 44167
YP_009211119.1 NC_028936_p34 hypothetical protein phrog_2433 unknown function unknown function 1 29822 30511
YP_009211104.1 NC_028936_p19 minor tail protein phrog_110 minor tail protein tail 1 16697 18463
YP_009211131.1 NC_028936_p46 hypothetical protein phrog_3903 unknown function unknown function 1 38638 38841
YP_009211090.1 NC_028936_p5 portal protein phrog_104 portal protein head and packaging 1 2268 3839
YP_009211128.1 NC_028936_p43 hypothetical protein phrog_2908 unknown function unknown function 1 37869 38174
YP_009211159.1 NC_028936_p74 hypothetical protein phrog_5243 unknown function unknown function 1 56075 56275
YP_009211163.1 NC_028936_p78 hypothetical protein phrog_4561 unknown function unknown function 1 58467 58685
YP_009211109.1 NC_028936_p24 minor tail protein phrog_416 minor tail protein tail 1 22900 23907
YP_009211087.1 NC_028936_p2 hypothetical protein phrog_2622 unknown function unknown function 1 443 643
YP_009211158.1 NC_028936_p73 hypothetical protein phrog_7638 unknown function unknown function 1 55422 55967
YP_009211161.1 NC_028936_p76 hypothetical protein phrog_16962 unknown function unknown function 1 56853 57272
YP_009211127.1 NC_028936_p42 HTH DNA binding protein phrog_1702 transcriptional repressor transcription regulation 1 37403 37597
YP_009211148.1 NC_028936_p63 hypothetical protein phrog_4269 unknown function unknown function 1 49536 49772
YP_009211140.1 NC_028936_p55 hypothetical protein phrog_2388 unknown function unknown function 1 42734 42853
YP_009211152.1 NC_028936_p67 hypothetical protein phrog_2342 unknown function unknown function 1 50928 51797
YP_009211115.1 NC_028936_p30 hypothetical protein phrog_1738 unknown function unknown function 1 27546 27797
YP_009211122.1 NC_028936_p37 hypothetical protein singleton unknown function unknown function 1 31970 32239