Genomic map of Mycobacterium phage Turj99 (NC_028941)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028941
Definition
Mycobacterium phage Turj99, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
51161
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
86
%GC
63.74
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009211747.1 NC_028941_p35 hypothetical protein phrog_411 unknown function unknown function 1 28874 29158
YP_009211798.1 NC_028941_p86 hypothetical protein phrog_828 unknown function unknown function -1 50560 50763
YP_009211730.1 NC_028941_p18 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13470 13865
YP_009211781.1 NC_028941_p69 hypothetical protein phrog_1584 unknown function unknown function -1 45023 45346
YP_009211756.1 NC_028941_p44 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34287 34778
YP_009211786.1 NC_028941_p74 hypothetical protein phrog_1720 unknown function unknown function -1 47010 47279
YP_009211728.1 NC_028941_p16 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 12659 13108
YP_009211797.1 NC_028941_p85 hypothetical protein phrog_2212 unknown function unknown function -1 50367 50450
YP_009211783.1 NC_028941_p71 hypothetical protein phrog_357 transcriptional repressor transcription regulation -1 45780 46466
YP_009211754.1 NC_028941_p42 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32163 33989
YP_009211788.1 NC_028941_p76 hypothetical protein phrog_5429 DNA repair protein DNA, RNA and nucleotide metabolism -1 47476 47985
YP_009211734.1 NC_028941_p22 tail assembly chaperone protein phrog_330 tail assembly chaperone tail 1 15197 15673
YP_009211714.1 NC_028941_p2 hypothetical protein phrog_226 minor tail protein tail 1 929 1369
YP_009211793.1 NC_028941_p81 hypothetical protein phrog_18281 unknown function unknown function -1 48903 49115
YP_009211780.1 NC_028941_p68 hypothetical protein phrog_13709 unknown function unknown function -1 44811 45026
YP_009211743.1 NC_028941_p31 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 25705 27183
YP_009211794.1 NC_028941_p82 hypothetical protein phrog_3414 unknown function unknown function -1 49182 49466
YP_009211777.1 NC_028941_p65 helix-turn-helix DNA binding domain protein phrog_2184 unknown function unknown function -1 43463 43783
YP_009211744.1 NC_028941_p32 hypothetical protein phrog_644 unknown function unknown function 1 27276 27596
YP_009211758.1 NC_028941_p46 hypothetical protein phrog_3283 unknown function unknown function -1 34954 35202
YP_009211737.1 NC_028941_p25 minor tail protein phrog_1543 minor tail protein tail 1 20678 20860
YP_009211762.1 NC_028941_p50 hypothetical protein phrog_221 metallo-phosphoesterase other -1 36279 37997
YP_009211736.1 NC_028941_p24 minor tail protein phrog_106 minor tail protein tail 1 18602 20659
YP_009211724.1 NC_028941_p12 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9878 10759
YP_009211784.1 NC_028941_p72 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46554 46853
YP_009211732.1 NC_028941_p20 major tail protein phrog_117 major tail protein tail 1 14324 15175
YP_009211729.1 NC_028941_p17 hypothetical protein phrog_320 head closure Hc1 connector 1 13108 13470
YP_009211770.1 NC_028941_p58 hypothetical protein phrog_14414 unknown function unknown function -1 41434 41634
YP_009211755.1 NC_028941_p43 hypothetical protein phrog_1781 unknown function unknown function -1 34026 34256
YP_009211746.1 NC_028941_p34 hypothetical protein phrog_12500 minor tail protein tail 1 27794 28738
YP_009211719.1 NC_028941_p7 hypothetical protein phrog_747 unknown function unknown function 1 4086 4343
YP_009211739.1 NC_028941_p27 hypothetical protein phrog_352 minor tail protein tail 1 22700 23146
YP_009211715.1 NC_028941_p3 hypothetical protein phrog_2830 unknown function unknown function 1 1541 1753
YP_009211716.1 NC_028941_p4 hypothetical protein phrog_1197 tail protein tail 1 2014 3084
YP_009211723.1 NC_028941_p11 portal protein phrog_104 portal protein head and packaging 1 8439 9881
YP_009211761.1 NC_028941_p49 recombination directionality factor phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36134 36274
YP_009211768.1 NC_028941_p56 hypothetical protein phrog_397 unknown function unknown function -1 40753 40896
YP_009211718.1 NC_028941_p6 structural protein phrog_1718 tail protein tail 1 3818 4078
YP_009211767.1 NC_028941_p55 hypothetical protein phrog_5801 unknown function unknown function -1 40682 40765
YP_009211749.1 NC_028941_p37 hypothetical protein phrog_1966 unknown function unknown function -1 30986 31258
YP_009211740.1 NC_028941_p28 hypothetical protein phrog_981 minor tail protein tail 1 23158 23490
YP_009211722.1 NC_028941_p10 terminase phrog_9 terminase large subunit head and packaging 1 6754 8442
YP_009211791.1 NC_028941_p79 hypothetical protein phrog_2093 unknown function unknown function -1 48334 48462
YP_009211727.1 NC_028941_p15 hypothetical protein phrog_1857 head-tail connector protein connector 1 12423 12659
YP_009211735.1 NC_028941_p23 tape measure protein phrog_305 tail length tape measure protein tail 1 16107 18578
YP_009211760.1 NC_028941_p48 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35350 36141
YP_009211779.1 NC_028941_p67 RecB exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43996 44832
YP_009211751.1 NC_028941_p39 hypothetical protein phrog_1860 unknown function unknown function -1 31434 31529
YP_009211731.1 NC_028941_p19 hypothetical protein phrog_123 tail terminator connector 1 13869 14315
YP_009211795.1 NC_028941_p83 hypothetical protein phrog_2985 unknown function unknown function -1 49736 49891
YP_009211733.1 NC_028941_p21 hypothetical protein phrog_393 tail assembly chaperone tail 1 15197 16095
YP_009211741.1 NC_028941_p29 hypothetical protein phrog_1397 unknown function unknown function 1 23487 23834
YP_009211773.1 NC_028941_p61 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42063 42884
YP_009211745.1 NC_028941_p33 hypothetical protein phrog_1560 unknown function unknown function 1 27606 27797
YP_009211790.1 NC_028941_p78 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 48170 48337
YP_009211792.1 NC_028941_p80 hypothetical protein phrog_932 unknown function unknown function -1 48484 48633
YP_009211720.1 NC_028941_p8 lysin A phrog_317 endolysin lysis 1 4343 5776
YP_009211789.1 NC_028941_p77 hypothetical protein phrog_1155 unknown function unknown function -1 47982 48170
YP_009211753.1 NC_028941_p41 hypothetical protein phrog_383 unknown function unknown function -1 31786 32142
YP_009211778.1 NC_028941_p66 helix-turn-helix DNA binding domain protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 43787 43969
YP_009211763.1 NC_028941_p51 hypothetical protein phrog_1503 unknown function unknown function -1 37994 38173
YP_009211759.1 NC_028941_p47 hypothetical protein phrog_499 unknown function unknown function -1 35192 35353
YP_009211775.1 NC_028941_p63 hypothetical protein phrog_1705 unknown function unknown function -1 43057 43176
YP_009211742.1 NC_028941_p30 hypothetical protein phrog_346 minor tail protein tail 1 23859 25712
YP_009211717.1 NC_028941_p5 structural protein phrog_553 minor tail protein tail 1 3094 3804
YP_009211725.1 NC_028941_p13 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10817 11329
YP_009211748.1 NC_028941_p36 integrase phrog_95 integrase integration and excision 1 29282 30865
YP_009211713.1 NC_028941_p1 WhiB/HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 598 894
YP_009211782.1 NC_028941_p70 hypothetical protein phrog_1809 unknown function unknown function -1 45343 45738
YP_009211785.1 NC_028941_p73 hypothetical protein phrog_8497 unknown function unknown function -1 46846 47013
YP_009211774.1 NC_028941_p62 hypothetical protein phrog_2507 unknown function unknown function -1 42884 43060
YP_009211726.1 NC_028941_p14 major capsid protein phrog_10 major head protein head and packaging 1 11339 12337
YP_009211771.1 NC_028941_p59 hypothetical protein phrog_1019 unknown function unknown function -1 41714 41800
YP_009211796.1 NC_028941_p84 hypothetical protein phrog_10288 unknown function unknown function -1 50099 50338
YP_009211738.1 NC_028941_p26 minor tail protein phrog_110 minor tail protein tail 1 20860 22662
YP_009211772.1 NC_028941_p60 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 41797 42063
YP_009211757.1 NC_028941_p45 hypothetical protein phrog_14562 unknown function unknown function -1 34775 34954
YP_009211752.1 NC_028941_p40 hypothetical protein phrog_1971 unknown function unknown function -1 31526 31789
YP_009211787.1 NC_028941_p75 hypothetical protein phrog_1387 unknown function unknown function -1 47276 47479
YP_009211769.1 NC_028941_p57 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 40915 41394
YP_009211721.1 NC_028941_p9 lysin B phrog_102 endolysin lysis 1 5766 6734
YP_009211764.1 NC_028941_p52 primase phrog_1167 phosphofructokinase other -1 38170 38730
YP_009211765.1 NC_028941_p53 intein-containing topoisomerase primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38694 40268
YP_009211776.1 NC_028941_p64 hypothetical protein phrog_520 unknown function unknown function -1 43173 43466
YP_009211766.1 NC_028941_p54 hypothetical protein phrog_1783 unknown function unknown function -1 40521 40685
YP_009211750.1 NC_028941_p38 hypothetical protein phrog_2035 unknown function unknown function -1 31255 31437