| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028946 |
Definition |
Mycobacterium phage Dante, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
REFSEQ |
Length |
59652 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
105 |
%GC |
61.79 |
Number of singletons |
5 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009212645.1 | NC_028946_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2255 | 3625 |
| YP_009212646.1 | NC_028946_p4 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3612 | 4367 |
| YP_009212698.1 | NC_028946_p56 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 38338 | 38619 |
| YP_009212699.1 | NC_028946_p57 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 38616 | 38963 |
| YP_009212696.1 | NC_028946_p54 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 37263 | 38090 |
| YP_009212726.1 | NC_028946_p84 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 51687 | 51980 |
| YP_009212740.1 | NC_028946_p98 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 55573 | 55734 |
| YP_009212736.1 | NC_028946_p94 | hypothetical protein | phrog_6481 | unknown function | unknown function | 1 | 54525 | 54734 |
| YP_009212742.1 | NC_028946_p100 | hypothetical protein | phrog_9361 | methyltransferase | other | 1 | 56284 | 56820 |
| YP_009212667.1 | NC_028946_p25 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25141 | 25338 |
| YP_009212673.1 | NC_028946_p31 | lysin B | phrog_102 | endolysin | lysis | 1 | 27637 | 28638 |
| YP_009212672.1 | NC_028946_p30 | lysin A | phrog_700 | endolysin | lysis | 1 | 26366 | 27637 |
| YP_009212684.1 | NC_028946_p42 | integrase | phrog_1 | integrase | integration and excision | 1 | 31713 | 33014 |
| YP_009212737.1 | NC_028946_p95 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 54734 | 54931 |
| YP_009212735.1 | NC_028946_p93 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54204 | 54518 |
| YP_009212652.1 | NC_028946_p10 | head-to-tail connector | phrog_813 | head-tail adaptor | connector | 1 | 7112 | 7516 |
| YP_009212702.1 | NC_028946_p60 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 39936 | 40220 |
| YP_009212680.1 | NC_028946_p38 | PLA2-like domain protein | phrog_3693 | unknown function | unknown function | -1 | 30752 | 30886 |
| YP_009212720.1 | NC_028946_p78 | hypothetical protein | phrog_1546 | unknown function | unknown function | 1 | 50103 | 50483 |
| YP_009212694.1 | NC_028946_p52 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 36848 | 37039 |
| YP_009212657.1 | NC_028946_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13045 | 14754 |
| YP_009212714.1 | NC_028946_p72 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47804 | 48244 |
| YP_009212655.1 | NC_028946_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8563 | 9114 |
| YP_009212713.1 | NC_028946_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47629 | 47811 |
| YP_009212686.1 | NC_028946_p44 | hypothetical protein | phrog_7613 | unknown function | unknown function | -1 | 33658 | 33804 |
| YP_009212677.1 | NC_028946_p35 | DnaQ-like exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29502 | 30323 |
| YP_009212653.1 | NC_028946_p11 | major tail protein | phrog_476 | major tail protein | tail | 1 | 7626 | 8435 |
| YP_009212660.1 | NC_028946_p18 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17416 | 19953 |
| YP_009212683.1 | NC_028946_p41 | hypothetical protein | phrog_22547 | unknown function | unknown function | 1 | 31373 | 31531 |
| YP_009212724.1 | NC_028946_p82 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | 1 | 51218 | 51511 |
| YP_009212706.1 | NC_028946_p64 | hypothetical protein | phrog_2632 | unknown function | unknown function | 1 | 40964 | 41224 |
| YP_009212656.1 | NC_028946_p14 | tapemeasure | phrog_1942 | tail length tape measure protein | tail | 1 | 9517 | 13044 |
| YP_009212654.1 | NC_028946_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8563 | 9499 |
| YP_009212715.1 | NC_028946_p73 | HNH endonuclease | phrog_14314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48234 | 48875 |
| YP_009212681.1 | NC_028946_p39 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 30886 | 31035 |
| YP_009212700.1 | NC_028946_p58 | WhiB | phrog_1333 | unknown function | unknown function | 1 | 38963 | 39457 |
| YP_009212659.1 | NC_028946_p17 | minir tail protein | phrog_732 | minor tail protein | tail | 1 | 16571 | 17419 |
| YP_009212722.1 | NC_028946_p80 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 50620 | 50814 |
| YP_009212729.1 | NC_028946_p87 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 52413 | 52553 |
| YP_009212644.1 | NC_028946_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 587 | 2224 |
| YP_009212741.1 | NC_028946_p99 | hypothetical protein | phrog_3297 | kinase | other | 1 | 55775 | 56278 |
| YP_009212666.1 | NC_028946_p24 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 24282 | 25136 |
| YP_009212725.1 | NC_028946_p83 | hypothetical protein | phrog_20071 | unknown function | unknown function | 1 | 51508 | 51690 |
| YP_009212717.1 | NC_028946_p75 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 49464 | 49727 |
| YP_009212712.1 | NC_028946_p70 | DNA methylase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 44090 | 47632 |
| YP_009212669.1 | NC_028946_p27 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 25789 | 25938 |
| YP_009212685.1 | NC_028946_p43 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 33091 | 33543 |
| YP_009212716.1 | NC_028946_p74 | hypothetical protein | phrog_3926 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 48875 | 49249 |
| YP_009212662.1 | NC_028946_p20 | hypothetical protein | phrog_2106 | minor tail protein | tail | 1 | 21833 | 22999 |
| YP_009212718.1 | NC_028946_p76 | hypothetical protein | phrog_7196 | unknown function | unknown function | 1 | 49724 | 49915 |
| YP_009212743.1 | NC_028946_p101 | glycosyltransferase | phrog_9549 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 56825 | 57499 |
| YP_009212734.1 | NC_028946_p92 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 53536 | 54207 |
| YP_009212728.1 | NC_028946_p86 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 52237 | 52416 |
| YP_009212674.1 | NC_028946_p32 | holin | phrog_443 | holin | lysis | 1 | 28654 | 28887 |
| YP_009212710.1 | NC_028946_p68 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 43688 | 43840 |
| YP_009212668.1 | NC_028946_p26 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25486 | 25782 |
| YP_009212744.1 | NC_028946_p102 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57514 | 57786 |
| YP_009212691.1 | NC_028946_p49 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 36138 | 36335 |
| YP_009212647.1 | NC_028946_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4452 | 5045 |
| YP_009212648.1 | NC_028946_p6 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5064 | 5885 |
| YP_009212708.1 | NC_028946_p66 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41796 | 42161 |
| YP_009212745.1 | NC_028946_p103 | N-acetylglucosaminyl transferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 57783 | 58406 |
| YP_009212727.1 | NC_028946_p85 | hypothetical protein | phrog_3472 | unknown function | unknown function | 1 | 51977 | 52240 |
| YP_009212697.1 | NC_028946_p55 | hypothetical protein | phrog_17015 | unknown function | unknown function | 1 | 38118 | 38255 |
| YP_009212671.1 | NC_028946_p29 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26136 | 26369 |
| YP_009212731.1 | NC_028946_p89 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 52666 | 52902 |
| YP_009212747.1 | NC_028946_p105 | HNH endonuclease | phrog_1271 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 58836 | 59579 |
| YP_009212649.1 | NC_028946_p7 | head-to-tail connector | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5894 | 6463 |
| YP_009212732.1 | NC_028946_p90 | hypothetical protein | phrog_6194 | unknown function | unknown function | 1 | 52899 | 53015 |
| YP_009212679.1 | NC_028946_p37 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 30622 | 30714 |
| YP_009212675.1 | NC_028946_p33 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 28884 | 29258 |
| YP_009212738.1 | NC_028946_p96 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 54928 | 55341 |
| YP_009212711.1 | NC_028946_p69 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43833 | 44093 |
| YP_009212709.1 | NC_028946_p67 | DNA methylase | phrog_116 | DNA methyltransferase | other | 1 | 42162 | 43691 |
| YP_009212650.1 | NC_028946_p8 | head-to-tail connector | phrog_763 | head-tail adaptor | connector | 1 | 6460 | 6789 |
| YP_009212682.1 | NC_028946_p40 | HTH DNA binding domain protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 31087 | 31281 |
| YP_009212730.1 | NC_028946_p88 | hypothetical protein | phrog_4126 | unknown function | unknown function | 1 | 52550 | 52669 |
| YP_009212665.1 | NC_028946_p23 | hypothetical protein | phrog_2012 | minor tail protein | tail | 1 | 23647 | 24285 |
| YP_009212664.1 | NC_028946_p22 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 23381 | 23635 |
| YP_009212692.1 | NC_028946_p50 | hypothetical protein | phrog_13720 | unknown function | unknown function | 1 | 36379 | 36570 |
| YP_009212746.1 | NC_028946_p104 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 58406 | 58750 |
| YP_009212695.1 | NC_028946_p53 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 37036 | 37266 |
| YP_009212690.1 | NC_028946_p48 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 35837 | 36052 |
| YP_009212693.1 | NC_028946_p51 | hypothetical protein | phrog_12427 | unknown function | unknown function | 1 | 36567 | 36851 |
| YP_009212739.1 | NC_028946_p97 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 55338 | 55580 |
| YP_009212661.1 | NC_028946_p19 | D-alanyl-D-alanine-carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19950 | 21836 |
| YP_009212658.1 | NC_028946_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14825 | 16534 |
| YP_009212643.1 | NC_028946_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 109 | 564 |
| YP_009212733.1 | NC_028946_p91 | hypothetical protein | phrog_3312 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 53012 | 53539 |
| YP_009212705.1 | NC_028946_p63 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 40737 | 40967 |
| YP_009212721.1 | NC_028946_p79 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 50480 | 50623 |
| YP_009212689.1 | NC_028946_p47 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 34836 | 35840 |
| YP_009212704.1 | NC_028946_p62 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 40579 | 40737 |
| YP_009212719.1 | NC_028946_p77 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 49912 | 50106 |
| YP_009212678.1 | NC_028946_p36 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30339 | 30629 |
| YP_009212651.1 | NC_028946_p9 | head-to-tail connector | phrog_1929 | head-tail connector protein | connector | 1 | 6796 | 7122 |
| YP_009212663.1 | NC_028946_p21 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23017 | 23358 |
| YP_009212703.1 | NC_028946_p61 | hypothetical protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40217 | 40582 |
| YP_009212707.1 | NC_028946_p65 | hypothetical protein | phrog_3290 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 41221 | 41799 |
| YP_009212723.1 | NC_028946_p81 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 50860 | 51231 |
| YP_009212676.1 | NC_028946_p34 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29255 | 29515 |
| YP_009212688.1 | NC_028946_p46 | HTH domain protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 34510 | 34779 |
| YP_009212687.1 | NC_028946_p45 | hypothetical protein | phrog_2838 | transcriptional repressor | transcription regulation | -1 | 33807 | 34409 |
| YP_009212670.1 | NC_028946_p28 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 25935 | 26069 |
| YP_009212701.1 | NC_028946_p59 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 39454 | 39939 |