Genomic map of Mycobacterium phage Dante (NC_028946)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028946
Definition
Mycobacterium phage Dante, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
REFSEQ
Length
59652
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
105
%GC
61.79
Number of singletons
5
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009212645.1 NC_028946_p3 portal protein phrog_104 portal protein head and packaging 1 2255 3625
YP_009212646.1 NC_028946_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3612 4367
YP_009212698.1 NC_028946_p56 hypothetical protein phrog_1849 unknown function unknown function 1 38338 38619
YP_009212699.1 NC_028946_p57 hypothetical protein phrog_658 unknown function unknown function 1 38616 38963
YP_009212696.1 NC_028946_p54 hypothetical protein phrog_1797 unknown function unknown function 1 37263 38090
YP_009212726.1 NC_028946_p84 hypothetical protein phrog_722 unknown function unknown function 1 51687 51980
YP_009212740.1 NC_028946_p98 hypothetical protein phrog_2057 unknown function unknown function 1 55573 55734
YP_009212736.1 NC_028946_p94 hypothetical protein phrog_6481 unknown function unknown function 1 54525 54734
YP_009212742.1 NC_028946_p100 hypothetical protein phrog_9361 methyltransferase other 1 56284 56820
YP_009212667.1 NC_028946_p25 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25141 25338
YP_009212673.1 NC_028946_p31 lysin B phrog_102 endolysin lysis 1 27637 28638
YP_009212672.1 NC_028946_p30 lysin A phrog_700 endolysin lysis 1 26366 27637
YP_009212684.1 NC_028946_p42 integrase phrog_1 integrase integration and excision 1 31713 33014
YP_009212737.1 NC_028946_p95 hypothetical protein phrog_1694 unknown function unknown function 1 54734 54931
YP_009212735.1 NC_028946_p93 hypothetical protein singleton unknown function unknown function 1 54204 54518
YP_009212652.1 NC_028946_p10 head-to-tail connector phrog_813 head-tail adaptor connector 1 7112 7516
YP_009212702.1 NC_028946_p60 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 39936 40220
YP_009212680.1 NC_028946_p38 PLA2-like domain protein phrog_3693 unknown function unknown function -1 30752 30886
YP_009212720.1 NC_028946_p78 hypothetical protein phrog_1546 unknown function unknown function 1 50103 50483
YP_009212694.1 NC_028946_p52 hypothetical protein phrog_1816 unknown function unknown function 1 36848 37039
YP_009212657.1 NC_028946_p15 minor tail protein phrog_106 minor tail protein tail 1 13045 14754
YP_009212714.1 NC_028946_p72 hypothetical protein singleton unknown function unknown function 1 47804 48244
YP_009212655.1 NC_028946_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8563 9114
YP_009212713.1 NC_028946_p71 hypothetical protein singleton unknown function unknown function 1 47629 47811
YP_009212686.1 NC_028946_p44 hypothetical protein phrog_7613 unknown function unknown function -1 33658 33804
YP_009212677.1 NC_028946_p35 DnaQ-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29502 30323
YP_009212653.1 NC_028946_p11 major tail protein phrog_476 major tail protein tail 1 7626 8435
YP_009212660.1 NC_028946_p18 minor tail protein phrog_346 minor tail protein tail 1 17416 19953
YP_009212683.1 NC_028946_p41 hypothetical protein phrog_22547 unknown function unknown function 1 31373 31531
YP_009212724.1 NC_028946_p82 hypothetical protein phrog_1573 DNA methyltransferase other 1 51218 51511
YP_009212706.1 NC_028946_p64 hypothetical protein phrog_2632 unknown function unknown function 1 40964 41224
YP_009212656.1 NC_028946_p14 tapemeasure phrog_1942 tail length tape measure protein tail 1 9517 13044
YP_009212654.1 NC_028946_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8563 9499
YP_009212715.1 NC_028946_p73 HNH endonuclease phrog_14314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 48234 48875
YP_009212681.1 NC_028946_p39 hypothetical protein phrog_2437 unknown function unknown function -1 30886 31035
YP_009212700.1 NC_028946_p58 WhiB phrog_1333 unknown function unknown function 1 38963 39457
YP_009212659.1 NC_028946_p17 minir tail protein phrog_732 minor tail protein tail 1 16571 17419
YP_009212722.1 NC_028946_p80 hypothetical protein phrog_647 unknown function unknown function 1 50620 50814
YP_009212729.1 NC_028946_p87 hypothetical protein phrog_1545 unknown function unknown function 1 52413 52553
YP_009212644.1 NC_028946_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 587 2224
YP_009212741.1 NC_028946_p99 hypothetical protein phrog_3297 kinase other 1 55775 56278
YP_009212666.1 NC_028946_p24 hypothetical protein phrog_754 minor tail protein tail 1 24282 25136
YP_009212725.1 NC_028946_p83 hypothetical protein phrog_20071 unknown function unknown function 1 51508 51690
YP_009212717.1 NC_028946_p75 hypothetical protein phrog_2080 unknown function unknown function 1 49464 49727
YP_009212712.1 NC_028946_p70 DNA methylase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 44090 47632
YP_009212669.1 NC_028946_p27 hypothetical protein phrog_932 unknown function unknown function 1 25789 25938
YP_009212685.1 NC_028946_p43 hypothetical protein phrog_1948 unknown function unknown function -1 33091 33543
YP_009212716.1 NC_028946_p74 hypothetical protein phrog_3926 replication initiation protein DNA, RNA and nucleotide metabolism 1 48875 49249
YP_009212662.1 NC_028946_p20 hypothetical protein phrog_2106 minor tail protein tail 1 21833 22999
YP_009212718.1 NC_028946_p76 hypothetical protein phrog_7196 unknown function unknown function 1 49724 49915
YP_009212743.1 NC_028946_p101 glycosyltransferase phrog_9549 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 56825 57499
YP_009212734.1 NC_028946_p92 hypothetical protein phrog_1467 unknown function unknown function 1 53536 54207
YP_009212728.1 NC_028946_p86 hypothetical protein phrog_1091 unknown function unknown function 1 52237 52416
YP_009212674.1 NC_028946_p32 holin phrog_443 holin lysis 1 28654 28887
YP_009212710.1 NC_028946_p68 hypothetical protein phrog_1311 unknown function unknown function 1 43688 43840
YP_009212668.1 NC_028946_p26 hypothetical protein phrog_411 unknown function unknown function 1 25486 25782
YP_009212744.1 NC_028946_p102 hypothetical protein singleton unknown function unknown function 1 57514 57786
YP_009212691.1 NC_028946_p49 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 36138 36335
YP_009212647.1 NC_028946_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4452 5045
YP_009212648.1 NC_028946_p6 major capsid protein phrog_267 major head protein head and packaging 1 5064 5885
YP_009212708.1 NC_028946_p66 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41796 42161
YP_009212745.1 NC_028946_p103 N-acetylglucosaminyl transferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 57783 58406
YP_009212727.1 NC_028946_p85 hypothetical protein phrog_3472 unknown function unknown function 1 51977 52240
YP_009212697.1 NC_028946_p55 hypothetical protein phrog_17015 unknown function unknown function 1 38118 38255
YP_009212671.1 NC_028946_p29 hypothetical protein phrog_747 unknown function unknown function 1 26136 26369
YP_009212731.1 NC_028946_p89 hypothetical protein phrog_2278 unknown function unknown function 1 52666 52902
YP_009212747.1 NC_028946_p105 HNH endonuclease phrog_1271 HNH endonuclease DNA, RNA and nucleotide metabolism 1 58836 59579
YP_009212649.1 NC_028946_p7 head-to-tail connector phrog_2377 head-tail adaptor Ad1 connector 1 5894 6463
YP_009212732.1 NC_028946_p90 hypothetical protein phrog_6194 unknown function unknown function 1 52899 53015
YP_009212679.1 NC_028946_p37 hypothetical protein phrog_1839 unknown function unknown function 1 30622 30714
YP_009212675.1 NC_028946_p33 hypothetical protein phrog_404 minor tail protein tail 1 28884 29258
YP_009212738.1 NC_028946_p96 hypothetical protein phrog_1186 unknown function unknown function 1 54928 55341
YP_009212711.1 NC_028946_p69 hypothetical protein singleton unknown function unknown function 1 43833 44093
YP_009212709.1 NC_028946_p67 DNA methylase phrog_116 DNA methyltransferase other 1 42162 43691
YP_009212650.1 NC_028946_p8 head-to-tail connector phrog_763 head-tail adaptor connector 1 6460 6789
YP_009212682.1 NC_028946_p40 HTH DNA binding domain protein phrog_66 excisionase and transcriptional regulator integration and excision -1 31087 31281
YP_009212730.1 NC_028946_p88 hypothetical protein phrog_4126 unknown function unknown function 1 52550 52669
YP_009212665.1 NC_028946_p23 hypothetical protein phrog_2012 minor tail protein tail 1 23647 24285
YP_009212664.1 NC_028946_p22 hypothetical protein phrog_2005 minor tail protein tail 1 23381 23635
YP_009212692.1 NC_028946_p50 hypothetical protein phrog_13720 unknown function unknown function 1 36379 36570
YP_009212746.1 NC_028946_p104 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 58406 58750
YP_009212695.1 NC_028946_p53 hypothetical protein phrog_780 unknown function unknown function 1 37036 37266
YP_009212690.1 NC_028946_p48 hypothetical protein phrog_2025 unknown function unknown function 1 35837 36052
YP_009212693.1 NC_028946_p51 hypothetical protein phrog_12427 unknown function unknown function 1 36567 36851
YP_009212739.1 NC_028946_p97 hypothetical protein phrog_1385 unknown function unknown function 1 55338 55580
YP_009212661.1 NC_028946_p19 D-alanyl-D-alanine-carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 19950 21836
YP_009212658.1 NC_028946_p16 minor tail protein phrog_110 minor tail protein tail 1 14825 16534
YP_009212643.1 NC_028946_p1 terminase small subunit phrog_226 minor tail protein tail 1 109 564
YP_009212733.1 NC_028946_p91 hypothetical protein phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 53012 53539
YP_009212705.1 NC_028946_p63 hypothetical protein phrog_1834 unknown function unknown function 1 40737 40967
YP_009212721.1 NC_028946_p79 hypothetical protein phrog_1311 unknown function unknown function 1 50480 50623
YP_009212689.1 NC_028946_p47 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 34836 35840
YP_009212704.1 NC_028946_p62 hypothetical protein phrog_2078 unknown function unknown function 1 40579 40737
YP_009212719.1 NC_028946_p77 hypothetical protein phrog_1943 unknown function unknown function 1 49912 50106
YP_009212678.1 NC_028946_p36 hypothetical protein phrog_1791 unknown function unknown function 1 30339 30629
YP_009212651.1 NC_028946_p9 head-to-tail connector phrog_1929 head-tail connector protein connector 1 6796 7122
YP_009212663.1 NC_028946_p21 hypothetical protein phrog_240 head protein head and packaging 1 23017 23358
YP_009212703.1 NC_028946_p61 hypothetical protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 40217 40582
YP_009212707.1 NC_028946_p65 hypothetical protein phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism 1 41221 41799
YP_009212723.1 NC_028946_p81 hypothetical protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 50860 51231
YP_009212676.1 NC_028946_p34 hypothetical protein phrog_2004 unknown function unknown function 1 29255 29515
YP_009212688.1 NC_028946_p46 HTH domain protein phrog_3 transcriptional repressor transcription regulation 1 34510 34779
YP_009212687.1 NC_028946_p45 hypothetical protein phrog_2838 transcriptional repressor transcription regulation -1 33807 34409
YP_009212670.1 NC_028946_p28 hypothetical protein phrog_1172 unknown function unknown function 1 25935 26069
YP_009212701.1 NC_028946_p59 hypothetical protein phrog_2096 unknown function unknown function 1 39454 39939