Genomic map of Mycobacterium phage Kratio (NC_028947)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028947
Definition
Mycobacterium phage Kratio, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
REFSEQ
Length
62738
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
99
%GC
65.66
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009212823.1 NC_028947_p76 hypothetical protein phrog_8324 unknown function unknown function 1 51094 51327
YP_009212794.1 NC_028947_p47 hypothetical protein phrog_1956 unknown function unknown function 1 37190 37468
YP_009212761.1 NC_028947_p14 major tail subunit phrog_117 major tail protein tail 1 10255 10866
YP_009212805.1 NC_028947_p58 hypothetical protein phrog_10696 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40754 41233
YP_009212763.1 NC_028947_p16 tail assembly chaperone phrog_1861 unknown function unknown function 1 10964 11455
YP_009212819.1 NC_028947_p72 hypothetical protein phrog_2342 unknown function unknown function 1 49330 50199
YP_009212750.1 NC_028947_p3 hypothetical protein phrog_1459 terminase small subunit head and packaging 1 736 1095
YP_009212840.1 NC_028947_p93 hypothetical protein phrog_6842 unknown function unknown function 1 59262 59591
YP_009212772.1 NC_028947_p25 hypothetical protein phrog_416 minor tail protein tail 1 23714 24778
YP_009212826.1 NC_028947_p79 hypothetical protein phrog_2822 unknown function unknown function 1 52503 53210
YP_009212831.1 NC_028947_p84 hypothetical protein phrog_19470 unknown function unknown function 1 54632 54784
YP_009212748.1 NC_028947_p1 hypothetical protein phrog_10556 unknown function unknown function 1 54 302
YP_009212799.1 NC_028947_p52 hypothetical protein phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 38274 39134
YP_009212762.1 NC_028947_p15 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 10964 11850
YP_009212778.1 NC_028947_p31 hypothetical protein phrog_1738 unknown function unknown function 1 28395 28646
YP_009212835.1 NC_028947_p88 hypothetical protein phrog_9985 unknown function unknown function 1 56233 56511
YP_009212774.1 NC_028947_p27 lysin A phrog_317 endolysin lysis 1 25231 26865
YP_009212814.1 NC_028947_p67 hypothetical protein singleton unknown function unknown function 1 47750 48187
YP_009212829.1 NC_028947_p82 hypothetical protein phrog_980 unknown function unknown function 1 54079 54366
YP_009212837.1 NC_028947_p90 hypothetical protein phrog_2433 unknown function unknown function 1 57046 57732
YP_009212782.1 NC_028947_p35 hypothetical protein phrog_21189 hydrolase other -1 30771 30902
YP_009212836.1 NC_028947_p89 hypothetical protein phrog_10190 DNA binding protein DNA, RNA and nucleotide metabolism 1 56513 56911
YP_009212832.1 NC_028947_p85 hypothetical protein phrog_19954 unknown function unknown function 1 54819 54986
YP_009212780.1 NC_028947_p33 hypothetical protein phrog_1042 unknown function unknown function 1 29847 30071
YP_009212760.1 NC_028947_p13 head-to-tail connector protein phrog_123 tail terminator connector 1 9789 10211
YP_009212758.1 NC_028947_p11 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 9192 9554
YP_009212795.1 NC_028947_p48 hypothetical protein phrog_10462 unknown function unknown function 1 37465 37620
YP_009212834.1 NC_028947_p87 hypothetical protein phrog_20186 unknown function unknown function 1 55989 56168
YP_009212803.1 NC_028947_p56 hypothetical protein phrog_1911 unknown function unknown function 1 39821 40396
YP_009212766.1 NC_028947_p19 minor tail subunit phrog_110 minor tail protein tail 1 17226 18998
YP_009212839.1 NC_028947_p92 hypothetical protein phrog_7638 unknown function unknown function 1 58177 59052
YP_009212817.1 NC_028947_p70 hypothetical protein phrog_11424 unknown function unknown function 1 48852 49022
YP_009212812.1 NC_028947_p65 hypothetical protein singleton unknown function unknown function 1 47196 47399
YP_009212764.1 NC_028947_p17 tapemeasure phrog_971 endolysin lysis 1 11868 15977
YP_009212789.1 NC_028947_p42 hypothetical protein phrog_11593 unknown function unknown function 1 34940 35092
YP_009212798.1 NC_028947_p51 hypothetical protein phrog_1498 unknown function unknown function 1 38110 38277
YP_009212790.1 NC_028947_p43 hypothetical protein phrog_2286 unknown function unknown function 1 35184 35939
YP_009212844.1 NC_028947_p97 hypothetical protein phrog_10342 DNA binding protein DNA, RNA and nucleotide metabolism 1 60761 61168
YP_009212845.1 NC_028947_p98 hypothetical protein phrog_10816 unknown function unknown function 1 62139 62321
YP_009212813.1 NC_028947_p66 hypothetical protein phrog_2287 unknown function unknown function 1 47514 47717
YP_009212791.1 NC_028947_p44 hypothetical protein phrog_2781 unknown function unknown function 1 35977 36582
YP_009212842.1 NC_028947_p95 hypothetical protein phrog_6135 unknown function unknown function 1 59965 60222
YP_009212809.1 NC_028947_p62 RusA phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 45599 45964
YP_009212771.1 NC_028947_p24 hypothetical protein phrog_10753 unknown function unknown function 1 23411 23695
YP_009212753.1 NC_028947_p6 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4082 6760
YP_009212756.1 NC_028947_p9 major capsid protein phrog_10 major head protein head and packaging 1 7731 8651
YP_009212838.1 NC_028947_p91 hypothetical protein phrog_2974 unknown function unknown function 1 57815 58060
YP_009212825.1 NC_028947_p78 hypothetical protein phrog_3167 unknown function unknown function 1 52141 52503
YP_009212781.1 NC_028947_p34 hypothetical protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 30195 30653
YP_009212785.1 NC_028947_p38 hypothetical protein phrog_950 unknown function unknown function -1 32701 33552
YP_009212770.1 NC_028947_p23 minor tail subunit phrog_346 minor tail protein tail 1 20891 23401
YP_009212824.1 NC_028947_p77 hypothetical protein phrog_9980 unknown function unknown function 1 51397 51987
YP_009212800.1 NC_028947_p53 hypothetical protein phrog_10500 unknown function unknown function 1 39131 39355
YP_009212759.1 NC_028947_p12 head-to-tail connector protein phrog_387 neck protein connector 1 9526 9792
YP_009212787.1 NC_028947_p40 hypothetical protein phrog_1702 transcriptional repressor transcription regulation 1 34179 34565
YP_009212818.1 NC_028947_p71 hypothetical protein phrog_38067 unknown function unknown function 1 49058 49333
YP_009212768.1 NC_028947_p21 minor tail subunit phrog_1565 minor tail protein tail 1 19505 20590
YP_009212806.1 NC_028947_p59 hypothetical protein phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41230 41610
YP_009212777.1 NC_028947_p30 hypothetical protein phrog_404 minor tail protein tail 1 28069 28398
YP_009212807.1 NC_028947_p60 hypothetical protein phrog_10729 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 41641 43806
YP_009212749.1 NC_028947_p2 hypothetical protein phrog_2293 unknown function unknown function 1 299 511
YP_009212830.1 NC_028947_p83 hypothetical protein phrog_3665 unknown function unknown function 1 54363 54506
YP_009212811.1 NC_028947_p64 hypothetical protein phrog_33883 unknown function unknown function 1 46855 47166
YP_009212776.1 NC_028947_p29 holin phrog_565 holin lysis 1 27620 28072
YP_009212816.1 NC_028947_p69 hypothetical protein singleton unknown function unknown function 1 48508 48810
YP_009212752.1 NC_028947_p5 portal protein phrog_104 portal protein head and packaging 1 2527 4065
YP_009212754.1 NC_028947_p7 hypothetical protein phrog_1757 unknown function unknown function 1 6757 6957
YP_009212793.1 NC_028947_p46 hypothetical protein phrog_9124 unknown function unknown function 1 36969 37193
YP_009212841.1 NC_028947_p94 hypothetical protein singleton unknown function unknown function 1 59697 59918
YP_009212783.1 NC_028947_p36 integrase phrog_95 integrase integration and excision 1 30972 32417
YP_009212804.1 NC_028947_p57 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 40509 40757
YP_009212786.1 NC_028947_p39 hypothetical protein phrog_1746 transcriptional repressor transcription regulation -1 33681 34085
YP_009212767.1 NC_028947_p20 hypothetical protein phrog_1697 minor tail protein tail 1 18999 19508
YP_009212779.1 NC_028947_p32 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28633 29847
YP_009212775.1 NC_028947_p28 lysin B phrog_102 endolysin lysis 1 26874 27623
YP_009212788.1 NC_028947_p41 hypothetical protein phrog_2908 unknown function unknown function 1 34572 34862
YP_009212757.1 NC_028947_p10 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 8728 9192
YP_009212796.1 NC_028947_p49 hypothetical protein phrog_4832 unknown function unknown function 1 37643 37807
YP_009212773.1 NC_028947_p26 hypothetical protein phrog_240 head protein head and packaging 1 24805 25203
YP_009212815.1 NC_028947_p68 hypothetical protein phrog_5505 unknown function unknown function 1 48265 48474
YP_009212822.1 NC_028947_p75 hypothetical protein phrog_3868 unknown function unknown function 1 50738 51097
YP_009212784.1 NC_028947_p37 hypothetical protein phrog_24177 unknown function unknown function 1 32535 32681
YP_009212821.1 NC_028947_p74 hypothetical protein phrog_2869 unknown function unknown function 1 50516 50725
YP_009212755.1 NC_028947_p8 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 7091 7657
YP_009212769.1 NC_028947_p22 hypothetical protein phrog_1736 minor tail protein tail 1 20590 20907
YP_009212828.1 NC_028947_p81 hypothetical protein phrog_2493 unknown function unknown function 1 53417 54088
YP_009212792.1 NC_028947_p45 hypothetical protein phrog_301 secreted protein other 1 36625 36966
YP_009212827.1 NC_028947_p80 hypothetical protein singleton unknown function unknown function 1 53212 53424
YP_009212833.1 NC_028947_p86 queuine tRNA-ribosyltransferase phrog_1279 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 55038 55922
YP_009212846.1 NC_028947_p99 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 62318 62623
YP_009212802.1 NC_028947_p55 hypothetical protein phrog_2388 unknown function unknown function 1 39561 39740
YP_009212765.1 NC_028947_p18 minor tail subunit phrog_106 minor tail protein tail 1 16054 17184
YP_009212797.1 NC_028947_p50 hypothetical protein phrog_2870 unknown function unknown function 1 37838 38113
YP_009212751.1 NC_028947_p4 terminase phrog_2 terminase large subunit head and packaging 1 1088 2515
YP_009212843.1 NC_028947_p96 hypothetical protein phrog_8588 unknown function unknown function 1 60324 60626
YP_009212820.1 NC_028947_p73 hypothetical protein phrog_5135 unknown function unknown function 1 50196 50531
YP_009212801.1 NC_028947_p54 hypothetical protein phrog_1581 unknown function unknown function 1 39352 39564
YP_009212810.1 NC_028947_p63 hypothetical protein phrog_908 unknown function unknown function 1 45964 46821
YP_009212808.1 NC_028947_p61 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 43803 45518