Genomic map of Streptomyces phage SF3 (NC_028952)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028952
Definition
Streptomyces phage SF3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
60934
Host Name
Streptomyces flavovirens
Host domain
Bacteria
Is prophage?
undef
Number of proteins
90
%GC
69.11
Number of singletons
24
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009213210.1 NC_028952_p83 protein of an unannotated phage phrog_758 head morphogenesis head and packaging 1 55948 56844
YP_009213145.1 NC_028952_p18 protein of an unannotated phage phrog_1887 tail protein tail 1 14539 15684
YP_009213174.1 NC_028952_p47 protein of an unannotated phage phrog_27988 unknown function unknown function 1 33675 33947
YP_009213199.1 NC_028952_p72 protein of an unannotated phage singleton unknown function unknown function 1 48073 48510
YP_009213202.1 NC_028952_p75 protein of an unannotated phage phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 49993 50292
YP_009213137.1 NC_028952_p10 protein of an unannotated phage phrog_501 head closure Hc1 connector 1 7392 7745
YP_009213136.1 NC_028952_p9 protein of an unannotated phage phrog_137 head-tail adaptor Ad1 connector 1 6952 7395
YP_009213151.1 NC_028952_p24 protein of an unannotated phage phrog_2658 hol-like chemotaxis other 1 20528 20860
YP_009213144.1 NC_028952_p17 protein of an unannotated phage phrog_11649 tail protein tail 1 13649 14539
YP_009213190.1 NC_028952_p63 protein of an unannotated phage singleton unknown function unknown function 1 42366 42692
YP_009213187.1 NC_028952_p60 protein of an unannotated phage singleton unknown function unknown function 1 40923 41120
YP_009213189.1 NC_028952_p62 protein of an unannotated phage phrog_826 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41503 42369
YP_009213128.1 NC_028952_p1 protein of an unannotated phage phrog_226 minor tail protein tail 1 16 426
YP_009213130.1 NC_028952_p3 protein of an unannotated phage phrog_104 portal protein head and packaging 1 2124 3551
YP_009213176.1 NC_028952_p49 protein of an unannotated phage phrog_16191 unknown function unknown function 1 34777 35838
YP_009213203.1 NC_028952_p76 protein of an unannotated phage phrog_8643 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 50587 51171
YP_009213164.1 NC_028952_p37 protein of an unannotated phage phrog_761 thymidylate kinase other 1 27677 28327
YP_009213155.1 NC_028952_p28 protein of an unannotated phage phrog_36104 unknown function unknown function 1 23343 23537
YP_009213178.1 NC_028952_p51 protein of an unannotated phage phrog_22421 unknown function unknown function 1 36644 37099
YP_009213150.1 NC_028952_p23 protein of an unannotated phage phrog_443 holin lysis 1 20233 20484
YP_009213212.1 NC_028952_p85 protein of an unannotated phage singleton unknown function unknown function 1 57346 57642
YP_009213208.1 NC_028952_p81 protein of an unannotated phage phrog_146 portal protein head and packaging 1 54647 55672
YP_009213149.1 NC_028952_p22 protein of an unannotated phage phrog_880 endolysin lysis 1 19359 20186
YP_009213129.1 NC_028952_p2 protein of an unannotated phage phrog_9 terminase large subunit head and packaging 1 441 2099
YP_009213196.1 NC_028952_p69 protein of an unannotated phage phrog_29416 unknown function unknown function 1 46345 47619
YP_009213173.1 NC_028952_p46 protein of an unannotated phage phrog_23328 unknown function unknown function 1 33136 33678
YP_009213186.1 NC_028952_p59 protein of an unannotated phage singleton unknown function unknown function 1 40399 40926
YP_009213165.1 NC_028952_p38 protein of an unannotated phage singleton unknown function unknown function 1 28324 28755
YP_009213139.1 NC_028952_p12 protein of an unannotated phage phrog_123 tail terminator connector 1 8026 8427
YP_009213154.1 NC_028952_p27 protein of an unannotated phage phrog_28759 unknown function unknown function 1 23077 23346
YP_009213207.1 NC_028952_p80 protein of an unannotated phage singleton unknown function unknown function -1 53709 54161
YP_009213156.1 NC_028952_p29 protein of an unannotated phage phrog_12213 unknown function unknown function 1 23534 24052
YP_009213142.1 NC_028952_p15 protein of an unannotated phage phrog_5813 tail assembly chaperone tail 1 9637 10065
YP_009213162.1 NC_028952_p35 protein of an unannotated phage singleton unknown function unknown function 1 25382 26221
YP_009213134.1 NC_028952_p7 protein of an unannotated phage phrog_29 major head protein head and packaging 1 5580 6626
YP_009213185.1 NC_028952_p58 protein of an unannotated phage singleton unknown function unknown function 1 40199 40402
YP_009213175.1 NC_028952_p48 protein of an unannotated phage phrog_298 exonuclease DNA, RNA and nucleotide metabolism 1 33944 34774
YP_009213198.1 NC_028952_p71 protein of an unannotated phage singleton unknown function unknown function 1 47817 47996
YP_009213191.1 NC_028952_p64 protein of an unannotated phage singleton unknown function unknown function 1 42689 42814
YP_009213211.1 NC_028952_p84 protein of an unannotated phage singleton unknown function unknown function -1 56884 57198
YP_009213152.1 NC_028952_p25 protein of an unannotated phage phrog_1806 collagen like minor tail tail 1 20908 21546
YP_009213157.1 NC_028952_p30 protein of an unannotated phage phrog_32738 unknown function unknown function 1 24201 24683
YP_009213197.1 NC_028952_p70 protein of an unannotated phage singleton unknown function unknown function 1 47651 47743
YP_009213194.1 NC_028952_p67 protein of an unannotated phage singleton unknown function unknown function -1 44375 44590
YP_009213166.1 NC_028952_p39 protein of an unannotated phage phrog_1 integrase integration and excision -1 29387 30592
YP_009213158.1 NC_028952_p31 protein of an unannotated phage phrog_35981 unknown function unknown function 1 24668 24781
YP_009213141.1 NC_028952_p14 protein of an unannotated phage phrog_5010 tail assembly chaperone tail 1 9269 9592
YP_009213170.1 NC_028952_p43 protein of an unannotated phage phrog_66 excisionase and transcriptional regulator integration and excision 1 32113 32337
YP_009213135.1 NC_028952_p8 protein of an unannotated phage phrog_6587 head-tail connector protein connector 1 6623 6946
YP_009213200.1 NC_028952_p73 protein of an unannotated phage phrog_23672 unknown function unknown function 1 49506 49766
YP_009213146.1 NC_028952_p19 protein of an unannotated phage phrog_25601 unknown function unknown function 1 15686 16612
YP_009213183.1 NC_028952_p56 protein of an unannotated phage phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 38788 39564
YP_009213132.1 NC_028952_p5 protein of an unannotated phage phrog_4708 head scaffolding protein head and packaging 1 4407 5156
YP_009213148.1 NC_028952_p21 protein of an unannotated phage phrog_7458 tail spike protein tail 1 17253 19277
YP_009213213.1 NC_028952_p86 protein of an unannotated phage singleton unknown function unknown function 1 57698 57847
YP_009213180.1 NC_028952_p53 protein of an unannotated phage phrog_35474 unknown function unknown function 1 37710 37985
YP_009213131.1 NC_028952_p4 protein of an unannotated phage phrog_1522 head maturation protease head and packaging 1 3544 4344
YP_009213177.1 NC_028952_p50 protein of an unannotated phage phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 35835 36647
YP_009213147.1 NC_028952_p20 protein of an unannotated phage phrog_22620 unknown function unknown function 1 16626 17243
YP_009213216.1 NC_028952_p89 protein of an unannotated phage phrog_9747 unknown function unknown function -1 60233 60691
YP_009213169.1 NC_028952_p42 protein of an unannotated phage phrog_8 transcriptional regulator transcription regulation -1 31162 31524
YP_009213159.1 NC_028952_p32 protein of an unannotated phage phrog_12354 transcriptional regulator transcription regulation 1 24774 25223
YP_009213209.1 NC_028952_p82 protein of an unannotated phage singleton unknown function unknown function -1 55695 55889
YP_009213188.1 NC_028952_p61 protein of an unannotated phage phrog_38209 unknown function unknown function 1 41153 41506
YP_009213215.1 NC_028952_p88 protein of an unannotated phage phrog_2 terminase large subunit head and packaging -1 58679 59956
YP_009213206.1 NC_028952_p79 protein of an unannotated phage phrog_760 unknown function unknown function -1 52167 53399
YP_009213161.1 NC_028952_p34 protein of an unannotated phage singleton unknown function unknown function 1 25319 25381
YP_009213163.1 NC_028952_p36 protein of an unannotated phage singleton unknown function unknown function 1 26181 27680
YP_009213140.1 NC_028952_p13 protein of an unannotated phage phrog_476 major tail protein tail 1 8500 9165
YP_009213195.1 NC_028952_p68 protein of an unannotated phage singleton unknown function unknown function 1 44674 46254
YP_009213172.1 NC_028952_p45 protein of an unannotated phage phrog_17827 unknown function unknown function 1 32771 33139
YP_009213153.1 NC_028952_p26 protein of an unannotated phage phrog_5823 transcriptional regulator transcription regulation 1 21757 22989
YP_009213201.1 NC_028952_p74 protein of an unannotated phage singleton unknown function unknown function 1 49841 49996
YP_009213168.1 NC_028952_p41 protein of an unannotated phage singleton unknown function unknown function 1 30962 31105
YP_009213160.1 NC_028952_p33 protein of an unannotated phage singleton unknown function unknown function -1 25247 25363
YP_009213167.1 NC_028952_p40 protein of an unannotated phage phrog_22170 unknown function unknown function -1 30712 30963
YP_009213133.1 NC_028952_p6 protein of an unannotated phage phrog_3583 head decoration head and packaging 1 5176 5565
YP_009213205.1 NC_028952_p78 protein of an unannotated phage phrog_766 head decoration head and packaging -1 51714 52163
YP_009213217.1 NC_028952_p90 protein of an unannotated phage singleton unknown function unknown function -1 60684 60932
YP_009213192.1 NC_028952_p65 protein of an unannotated phage phrog_2259 Rnase H DNA, RNA and nucleotide metabolism 1 42811 43368
YP_009213184.1 NC_028952_p57 protein of an unannotated phage phrog_8924 unknown function unknown function 1 39567 40202
YP_009213193.1 NC_028952_p66 protein of an unannotated phage phrog_7575 unknown function unknown function 1 43466 44308
YP_009213143.1 NC_028952_p16 protein of an unannotated phage phrog_971 endolysin lysis 1 10072 13644
YP_009213214.1 NC_028952_p87 protein of an unannotated phage phrog_4796 unknown function unknown function 1 58134 58682
YP_009213171.1 NC_028952_p44 protein of an unannotated phage phrog_36719 unknown function unknown function 1 32425 32778
YP_009213204.1 NC_028952_p77 protein of an unannotated phage singleton unknown function unknown function 1 51278 51349
YP_009213138.1 NC_028952_p11 protein of an unannotated phage phrog_387 neck protein connector 1 7748 8026
YP_009213182.1 NC_028952_p55 protein of an unannotated phage phrog_16156 unknown function unknown function 1 38425 38775
YP_009213179.1 NC_028952_p52 protein of an unannotated phage phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 37096 37713
YP_009213181.1 NC_028952_p54 protein of an unannotated phage phrog_15058 unknown function unknown function 1 37991 38428