Genomic map of Mannheimia phage vB_MhS_1152AP2 (NC_028956)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028956
Definition
Mannheimia phage vB_MhS_1152AP2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
52139
Host Name
Mannheimia haemolytica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
41.09
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009213773.1 NC_028956_p15 hypothetical protein phrog_313 Tail assembly chaperone tail 1 10391 10792
YP_009213803.1 NC_028956_p45 hypothetical protein phrog_16197 unknown function unknown function -1 35632 36582
YP_009213784.1 NC_028956_p26 hypothetical protein phrog_22303 unknown function unknown function 1 25349 25498
YP_009213796.1 NC_028956_p38 hypothetical protein phrog_7561 unknown function unknown function 1 32058 32246
YP_009213779.1 NC_028956_p21 minor tail protein K phrog_30 minor tail protein tail 1 16056 16787
YP_009213763.1 NC_028956_p5 hypothetical protein phrog_3514 unknown function unknown function 1 4766 4984
YP_009213762.1 NC_028956_p4 head morphogenesis protein phrog_7625 head morphogenesis head and packaging 1 3105 4766
YP_009213777.1 NC_028956_p19 tail length tape measure protein phrog_339 tail length tape measure protein tail 1 12302 15328
YP_009213814.1 NC_028956_p56 hypothetical protein phrog_4293 unknown function unknown function -1 42362 42742
YP_009213806.1 NC_028956_p48 hypothetical protein phrog_18413 unknown function unknown function -1 37417 37776
YP_009213782.1 NC_028956_p24 host specificity protein J phrog_31 central tail fiber J tail 1 17649 24698
YP_009213804.1 NC_028956_p46 hypothetical protein phrog_17268 unknown function unknown function -1 36595 36807
YP_009213820.1 NC_028956_p62 helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 45244 46605
YP_009213828.1 NC_028956_p70 antitermination protein Q phrog_943 anti-termination protein Q-like transcription regulation 1 49123 49596
YP_009213834.1 NC_028956_p76 lytic protein Rz phrog_214 Rz-like spanin lysis 1 51220 51570
YP_009213766.1 NC_028956_p8 hypothetical protein phrog_247 major head protein head and packaging 1 6316 7263
YP_009213783.1 NC_028956_p25 hypothetical protein phrog_14212 unknown function unknown function 1 24821 25114
YP_009213815.1 NC_028956_p57 CI repressor phrog_4 transcriptional repressor transcription regulation -1 42793 43452
YP_009213781.1 NC_028956_p23 tail assembly protein I phrog_32 tail assembly protein tail 1 17056 17646
YP_009213770.1 NC_028956_p12 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 8464 8877
YP_009213817.1 NC_028956_p59 CII protein phrog_725 CII-like regulator transcription regulation 1 43809 44069
YP_009213785.1 NC_028956_p27 hypothetical protein phrog_18203 unknown function unknown function 1 25491 25802
YP_009213805.1 NC_028956_p47 hypothetical protein phrog_13811 unknown function unknown function -1 36941 37420
YP_009213793.1 NC_028956_p35 antirepressor protein Ant phrog_245 anti-repressor Ant transcription regulation -1 30135 30836
YP_009213768.1 NC_028956_p10 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 7663 8100
YP_009213808.1 NC_028956_p50 hypothetical protein phrog_20537 unknown function unknown function -1 38855 39091
YP_009213835.1 NC_028956_p77 lytic protein Rz1 phrog_456 Rz-like spanin lysis 1 51575 51748
YP_009213811.1 NC_028956_p53 plasmid maintenance system killer HigA phrog_1381 plasmid antitoxin with HTH domain moron, auxiliary metabolic gene and host takeover 1 40279 40584
YP_009213780.1 NC_028956_p22 hypothetical protein phrog_13775 unknown function unknown function 1 16928 17053
YP_009213788.1 NC_028956_p30 hypothetical protein phrog_6098 unknown function unknown function 1 27442 27621
YP_009213759.1 NC_028956_p1 terminase, small subunit phrog_51 terminase small subunit head and packaging 1 1 525
YP_009213837.1 NC_028956_p79 hypothetical protein phrog_8452 unknown function unknown function 1 51970 52125
YP_009213772.1 NC_028956_p14 hypothetical protein phrog_290 minor tail protein tail 1 9279 10301
YP_009213760.1 NC_028956_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 509 1741
YP_009213774.1 NC_028956_p16 hypothetical protein phrog_4966 unknown function unknown function 1 10807 11133
YP_009213829.1 NC_028956_p71 hypothetical protein phrog_25131 unknown function unknown function 1 49794 49910
YP_009213833.1 NC_028956_p75 endolysin phrog_7 endolysin lysis 1 50678 51247
YP_009213778.1 NC_028956_p20 minor tail protein L phrog_18 minor tail protein tail 1 15336 16052
YP_009213799.1 NC_028956_p41 hypothetical protein phrog_7704 unknown function unknown function -1 32898 33425
YP_009213790.1 NC_028956_p32 hypothetical protein phrog_8896 excisionase integration and excision -1 28963 29184
YP_009213791.1 NC_028956_p33 hypothetical protein phrog_1229 unknown function unknown function -1 29234 29617
YP_009213787.1 NC_028956_p29 hypothetical protein phrog_16984 unknown function unknown function -1 26537 27127
YP_009213812.1 NC_028956_p54 transposase phrog_157 transposase integration and excision -1 40722 41762
YP_009213771.1 NC_028956_p13 hypothetical protein phrog_179 tail terminator connector 1 8877 9269
YP_009213818.1 NC_028956_p60 hypothetical protein phrog_12173 unknown function unknown function 1 44233 44403
YP_009213830.1 NC_028956_p72 hypothetical protein phrog_11765 unknown function unknown function 1 49916 50101
YP_009213819.1 NC_028956_p61 replication protein O phrog_5810 replication initiation protein DNA, RNA and nucleotide metabolism 1 44378 45247
YP_009213767.1 NC_028956_p9 hypothetical protein phrog_8214 Arc-like repressor transcription regulation 1 7323 7673
YP_009213810.1 NC_028956_p52 plasmid maintenance system killer HigB phrog_3066 toxin of TA system moron, auxiliary metabolic gene and host takeover 1 39995 40270
YP_009213794.1 NC_028956_p36 hypothetical protein phrog_3887 transcriptional regulator transcription regulation 1 31381 31596
YP_009213776.1 NC_028956_p18 hypothetical protein singleton unknown function unknown function 1 11545 11982
YP_009213826.1 NC_028956_p68 hypothetical protein phrog_12212 unknown function unknown function 1 48449 48571
YP_009213775.1 NC_028956_p17 minor tail protein M phrog_14 minor tail protein tail 1 11135 11458
YP_009213761.1 NC_028956_p3 portal protein phrog_145 portal protein head and packaging 1 1754 3157
YP_009213789.1 NC_028956_p31 integrase phrog_1 integrase integration and excision -1 27901 28941
YP_009213802.1 NC_028956_p44 recombinase phrog_10056 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 34797 35591
YP_009213824.1 NC_028956_p66 hypothetical protein phrog_11301 unknown function unknown function 1 47984 48196
YP_009213797.1 NC_028956_p39 hypothetical protein phrog_1992 MazG-like pyrophosphatase other -1 32250 32714
YP_009213792.1 NC_028956_p34 hypothetical protein phrog_17752 unknown function unknown function -1 29705 29881
YP_009213765.1 NC_028956_p7 hypothetical protein phrog_784 unknown function unknown function 1 5516 6250
YP_009213801.1 NC_028956_p43 exonuclease phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 34165 34800
YP_009213807.1 NC_028956_p49 hypothetical protein phrog_18123 unknown function unknown function -1 37780 38286
YP_009213800.1 NC_028956_p42 pyruvate kinase phrog_9552 kinase other -1 33503 33955
YP_009213823.1 NC_028956_p65 hypothetical protein phrog_319 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 47428 47934
YP_009213827.1 NC_028956_p69 NinG protein phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 48564 49133
YP_009213786.1 NC_028956_p28 hypothetical protein phrog_12690 unknown function unknown function -1 25949 26467
YP_009213798.1 NC_028956_p40 hypothetical protein phrog_14017 unknown function unknown function -1 32698 32901
YP_009213764.1 NC_028956_p6 hypothetical protein phrog_990 metal-dependent phosphohydrolase other 1 4985 5398
YP_009213832.1 NC_028956_p74 holin phrog_20 holin lysis 1 50440 50685
YP_009213769.1 NC_028956_p11 hypothetical protein phrog_161 head closure Hc1 connector 1 8100 8471
YP_009213813.1 NC_028956_p55 hypothetical protein phrog_12015 unknown function unknown function -1 41872 42357
YP_009213831.1 NC_028956_p73 hypothetical protein phrog_19968 unknown function unknown function 1 50127 50297
YP_009213809.1 NC_028956_p51 hypothetical protein phrog_12192 unknown function unknown function -1 39473 39769
YP_009213822.1 NC_028956_p64 hypothetical protein phrog_8506 unknown function unknown function 1 47229 47444
YP_009213836.1 NC_028956_p78 hypothetical protein phrog_26315 unknown function unknown function -1 51761 51946
YP_009213816.1 NC_028956_p58 Cro repressor phrog_3 transcriptional repressor transcription regulation 1 43582 43788
YP_009213825.1 NC_028956_p67 hypothetical protein phrog_12445 unknown function unknown function 1 48242 48436
YP_009213821.1 NC_028956_p63 methyltransferase phrog_359 DNA methyltransferase other 1 46602 47138
YP_009213795.1 NC_028956_p37 hypothetical protein phrog_32500 unknown function unknown function -1 31636 31866