| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028956 |
Definition |
Mannheimia phage vB_MhS_1152AP2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
52139 |
Host Name |
Mannheimia haemolytica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
79 |
%GC |
41.09 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009213773.1 | NC_028956_p15 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | 1 | 10391 | 10792 |
| YP_009213803.1 | NC_028956_p45 | hypothetical protein | phrog_16197 | unknown function | unknown function | -1 | 35632 | 36582 |
| YP_009213784.1 | NC_028956_p26 | hypothetical protein | phrog_22303 | unknown function | unknown function | 1 | 25349 | 25498 |
| YP_009213796.1 | NC_028956_p38 | hypothetical protein | phrog_7561 | unknown function | unknown function | 1 | 32058 | 32246 |
| YP_009213779.1 | NC_028956_p21 | minor tail protein K | phrog_30 | minor tail protein | tail | 1 | 16056 | 16787 |
| YP_009213763.1 | NC_028956_p5 | hypothetical protein | phrog_3514 | unknown function | unknown function | 1 | 4766 | 4984 |
| YP_009213762.1 | NC_028956_p4 | head morphogenesis protein | phrog_7625 | head morphogenesis | head and packaging | 1 | 3105 | 4766 |
| YP_009213777.1 | NC_028956_p19 | tail length tape measure protein | phrog_339 | tail length tape measure protein | tail | 1 | 12302 | 15328 |
| YP_009213814.1 | NC_028956_p56 | hypothetical protein | phrog_4293 | unknown function | unknown function | -1 | 42362 | 42742 |
| YP_009213806.1 | NC_028956_p48 | hypothetical protein | phrog_18413 | unknown function | unknown function | -1 | 37417 | 37776 |
| YP_009213782.1 | NC_028956_p24 | host specificity protein J | phrog_31 | central tail fiber J | tail | 1 | 17649 | 24698 |
| YP_009213804.1 | NC_028956_p46 | hypothetical protein | phrog_17268 | unknown function | unknown function | -1 | 36595 | 36807 |
| YP_009213820.1 | NC_028956_p62 | helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 45244 | 46605 |
| YP_009213828.1 | NC_028956_p70 | antitermination protein Q | phrog_943 | anti-termination protein Q-like | transcription regulation | 1 | 49123 | 49596 |
| YP_009213834.1 | NC_028956_p76 | lytic protein Rz | phrog_214 | Rz-like spanin | lysis | 1 | 51220 | 51570 |
| YP_009213766.1 | NC_028956_p8 | hypothetical protein | phrog_247 | major head protein | head and packaging | 1 | 6316 | 7263 |
| YP_009213783.1 | NC_028956_p25 | hypothetical protein | phrog_14212 | unknown function | unknown function | 1 | 24821 | 25114 |
| YP_009213815.1 | NC_028956_p57 | CI repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 42793 | 43452 |
| YP_009213781.1 | NC_028956_p23 | tail assembly protein I | phrog_32 | tail assembly protein | tail | 1 | 17056 | 17646 |
| YP_009213770.1 | NC_028956_p12 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 8464 | 8877 |
| YP_009213817.1 | NC_028956_p59 | CII protein | phrog_725 | CII-like regulator | transcription regulation | 1 | 43809 | 44069 |
| YP_009213785.1 | NC_028956_p27 | hypothetical protein | phrog_18203 | unknown function | unknown function | 1 | 25491 | 25802 |
| YP_009213805.1 | NC_028956_p47 | hypothetical protein | phrog_13811 | unknown function | unknown function | -1 | 36941 | 37420 |
| YP_009213793.1 | NC_028956_p35 | antirepressor protein Ant | phrog_245 | anti-repressor Ant | transcription regulation | -1 | 30135 | 30836 |
| YP_009213768.1 | NC_028956_p10 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 7663 | 8100 |
| YP_009213808.1 | NC_028956_p50 | hypothetical protein | phrog_20537 | unknown function | unknown function | -1 | 38855 | 39091 |
| YP_009213835.1 | NC_028956_p77 | lytic protein Rz1 | phrog_456 | Rz-like spanin | lysis | 1 | 51575 | 51748 |
| YP_009213811.1 | NC_028956_p53 | plasmid maintenance system killer HigA | phrog_1381 | plasmid antitoxin with HTH domain | moron, auxiliary metabolic gene and host takeover | 1 | 40279 | 40584 |
| YP_009213780.1 | NC_028956_p22 | hypothetical protein | phrog_13775 | unknown function | unknown function | 1 | 16928 | 17053 |
| YP_009213788.1 | NC_028956_p30 | hypothetical protein | phrog_6098 | unknown function | unknown function | 1 | 27442 | 27621 |
| YP_009213759.1 | NC_028956_p1 | terminase, small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 1 | 525 |
| YP_009213837.1 | NC_028956_p79 | hypothetical protein | phrog_8452 | unknown function | unknown function | 1 | 51970 | 52125 |
| YP_009213772.1 | NC_028956_p14 | hypothetical protein | phrog_290 | minor tail protein | tail | 1 | 9279 | 10301 |
| YP_009213760.1 | NC_028956_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 509 | 1741 |
| YP_009213774.1 | NC_028956_p16 | hypothetical protein | phrog_4966 | unknown function | unknown function | 1 | 10807 | 11133 |
| YP_009213829.1 | NC_028956_p71 | hypothetical protein | phrog_25131 | unknown function | unknown function | 1 | 49794 | 49910 |
| YP_009213833.1 | NC_028956_p75 | endolysin | phrog_7 | endolysin | lysis | 1 | 50678 | 51247 |
| YP_009213778.1 | NC_028956_p20 | minor tail protein L | phrog_18 | minor tail protein | tail | 1 | 15336 | 16052 |
| YP_009213799.1 | NC_028956_p41 | hypothetical protein | phrog_7704 | unknown function | unknown function | -1 | 32898 | 33425 |
| YP_009213790.1 | NC_028956_p32 | hypothetical protein | phrog_8896 | excisionase | integration and excision | -1 | 28963 | 29184 |
| YP_009213791.1 | NC_028956_p33 | hypothetical protein | phrog_1229 | unknown function | unknown function | -1 | 29234 | 29617 |
| YP_009213787.1 | NC_028956_p29 | hypothetical protein | phrog_16984 | unknown function | unknown function | -1 | 26537 | 27127 |
| YP_009213812.1 | NC_028956_p54 | transposase | phrog_157 | transposase | integration and excision | -1 | 40722 | 41762 |
| YP_009213771.1 | NC_028956_p13 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 8877 | 9269 |
| YP_009213818.1 | NC_028956_p60 | hypothetical protein | phrog_12173 | unknown function | unknown function | 1 | 44233 | 44403 |
| YP_009213830.1 | NC_028956_p72 | hypothetical protein | phrog_11765 | unknown function | unknown function | 1 | 49916 | 50101 |
| YP_009213819.1 | NC_028956_p61 | replication protein O | phrog_5810 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 44378 | 45247 |
| YP_009213767.1 | NC_028956_p9 | hypothetical protein | phrog_8214 | Arc-like repressor | transcription regulation | 1 | 7323 | 7673 |
| YP_009213810.1 | NC_028956_p52 | plasmid maintenance system killer HigB | phrog_3066 | toxin of TA system | moron, auxiliary metabolic gene and host takeover | 1 | 39995 | 40270 |
| YP_009213794.1 | NC_028956_p36 | hypothetical protein | phrog_3887 | transcriptional regulator | transcription regulation | 1 | 31381 | 31596 |
| YP_009213776.1 | NC_028956_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11545 | 11982 |
| YP_009213826.1 | NC_028956_p68 | hypothetical protein | phrog_12212 | unknown function | unknown function | 1 | 48449 | 48571 |
| YP_009213775.1 | NC_028956_p17 | minor tail protein M | phrog_14 | minor tail protein | tail | 1 | 11135 | 11458 |
| YP_009213761.1 | NC_028956_p3 | portal protein | phrog_145 | portal protein | head and packaging | 1 | 1754 | 3157 |
| YP_009213789.1 | NC_028956_p31 | integrase | phrog_1 | integrase | integration and excision | -1 | 27901 | 28941 |
| YP_009213802.1 | NC_028956_p44 | recombinase | phrog_10056 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 34797 | 35591 |
| YP_009213824.1 | NC_028956_p66 | hypothetical protein | phrog_11301 | unknown function | unknown function | 1 | 47984 | 48196 |
| YP_009213797.1 | NC_028956_p39 | hypothetical protein | phrog_1992 | MazG-like pyrophosphatase | other | -1 | 32250 | 32714 |
| YP_009213792.1 | NC_028956_p34 | hypothetical protein | phrog_17752 | unknown function | unknown function | -1 | 29705 | 29881 |
| YP_009213765.1 | NC_028956_p7 | hypothetical protein | phrog_784 | unknown function | unknown function | 1 | 5516 | 6250 |
| YP_009213801.1 | NC_028956_p43 | exonuclease | phrog_149 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 34165 | 34800 |
| YP_009213807.1 | NC_028956_p49 | hypothetical protein | phrog_18123 | unknown function | unknown function | -1 | 37780 | 38286 |
| YP_009213800.1 | NC_028956_p42 | pyruvate kinase | phrog_9552 | kinase | other | -1 | 33503 | 33955 |
| YP_009213823.1 | NC_028956_p65 | hypothetical protein | phrog_319 | NinB/ Orf homologous recombination mediator | DNA, RNA and nucleotide metabolism | 1 | 47428 | 47934 |
| YP_009213827.1 | NC_028956_p69 | NinG protein | phrog_171 | NinG/ Rap DNA junction specific endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48564 | 49133 |
| YP_009213786.1 | NC_028956_p28 | hypothetical protein | phrog_12690 | unknown function | unknown function | -1 | 25949 | 26467 |
| YP_009213798.1 | NC_028956_p40 | hypothetical protein | phrog_14017 | unknown function | unknown function | -1 | 32698 | 32901 |
| YP_009213764.1 | NC_028956_p6 | hypothetical protein | phrog_990 | metal-dependent phosphohydrolase | other | 1 | 4985 | 5398 |
| YP_009213832.1 | NC_028956_p74 | holin | phrog_20 | holin | lysis | 1 | 50440 | 50685 |
| YP_009213769.1 | NC_028956_p11 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 8100 | 8471 |
| YP_009213813.1 | NC_028956_p55 | hypothetical protein | phrog_12015 | unknown function | unknown function | -1 | 41872 | 42357 |
| YP_009213831.1 | NC_028956_p73 | hypothetical protein | phrog_19968 | unknown function | unknown function | 1 | 50127 | 50297 |
| YP_009213809.1 | NC_028956_p51 | hypothetical protein | phrog_12192 | unknown function | unknown function | -1 | 39473 | 39769 |
| YP_009213822.1 | NC_028956_p64 | hypothetical protein | phrog_8506 | unknown function | unknown function | 1 | 47229 | 47444 |
| YP_009213836.1 | NC_028956_p78 | hypothetical protein | phrog_26315 | unknown function | unknown function | -1 | 51761 | 51946 |
| YP_009213816.1 | NC_028956_p58 | Cro repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 43582 | 43788 |
| YP_009213825.1 | NC_028956_p67 | hypothetical protein | phrog_12445 | unknown function | unknown function | 1 | 48242 | 48436 |
| YP_009213821.1 | NC_028956_p63 | methyltransferase | phrog_359 | DNA methyltransferase | other | 1 | 46602 | 47138 |
| YP_009213795.1 | NC_028956_p37 | hypothetical protein | phrog_32500 | unknown function | unknown function | -1 | 31636 | 31866 |