Genomic map of Propionibacterium phage PAC1 (NC_028967)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028967
Definition
Propionibacterium phage PAC1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; unclassified Pahexavirus.
DB of origin
REFSEQ
Length
29605
Host Name
Propionibacterium acnes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
42
%GC
54.04
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009214905.1 NC_028967_p30 hypothetical protein phrog_2304 DNA primase DNA, RNA and nucleotide metabolism -1 21289 21690
YP_009214876.1 NC_028967_p1 hypothetical protein phrog_1897 terminase small subunit head and packaging 1 2 373
YP_009214880.1 NC_028967_p5 head assembly scaffold phrog_1879 head scaffolding protein head and packaging 1 4072 4626
YP_009214902.1 NC_028967_p27 hypothetical protein phrog_2548 unknown function unknown function -1 19610 20176
YP_009214900.1 NC_028967_p25 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism -1 18386 19432
YP_009214916.1 NC_028967_p41 hypothetical protein phrog_919 unknown function unknown function -1 26681 26989
YP_009214911.1 NC_028967_p36 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism -1 24759 25118
YP_009214913.1 NC_028967_p38 hypothetical protein phrog_1884 unknown function unknown function -1 25424 25651
YP_009214906.1 NC_028967_p31 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 21650 22006
YP_009214895.1 NC_028967_p20 holin phrog_443 holin lysis 1 16375 16770
YP_009214892.1 NC_028967_p17 minor tail protein phrog_1958 minor tail protein tail 1 14423 14662
YP_009214887.1 NC_028967_p12 tail assembly chaperone phrog_4075 tail assembly chaperone tail 1 7816 8498
YP_009214877.1 NC_028967_p2 hypothetical protein phrog_9 terminase large subunit head and packaging 1 373 1884
YP_009214881.1 NC_028967_p6 capsid protein phrog_10 major head protein head and packaging 1 4633 5580
YP_009214917.1 NC_028967_p42 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 29241 29543
YP_009214897.1 NC_028967_p22 hypothetical protein phrog_1729 unknown function unknown function -1 17355 17753
YP_009214879.1 NC_028967_p4 hypothetical protein phrog_193 head maturation protease head and packaging 1 3213 3968
YP_009214888.1 NC_028967_p13 tape measure protein phrog_58 tail length tape measure protein tail 1 8506 11388
YP_009214884.1 NC_028967_p9 hypothetical protein phrog_387 neck protein connector 1 6441 6731
YP_009214909.1 NC_028967_p34 hypothetical protein phrog_1890 unknown function unknown function -1 23417 23821
YP_009214914.1 NC_028967_p39 hypothetical protein phrog_1908 unknown function unknown function -1 25676 26209
YP_009214890.1 NC_028967_p15 protease phrog_110 minor tail protein tail 1 12353 13510
YP_009214903.1 NC_028967_p28 hypothetical protein phrog_1881 unknown function unknown function -1 20173 20736
YP_009214896.1 NC_028967_p21 hypothetical protein phrog_2092 unknown function unknown function -1 16859 17350
YP_009214901.1 NC_028967_p26 hypothetical protein phrog_1923 unknown function unknown function -1 19429 19572
YP_009214894.1 NC_028967_p19 endolysin phrog_670 endolysin lysis 1 15505 16362
YP_009214885.1 NC_028967_p10 hypothetical protein phrog_1892 minor tail protein tail 1 6815 7099
YP_009214899.1 NC_028967_p24 hypothetical protein phrog_1340 unknown function unknown function -1 18056 18376
YP_009214883.1 NC_028967_p8 hypothetical protein phrog_501 head closure Hc1 connector 1 6087 6434
YP_009214893.1 NC_028967_p18 minor tail protein phrog_1806 collagen like minor tail tail 1 14666 15463
YP_009214891.1 NC_028967_p16 minor tail protein phrog_1910 lectin other 1 13530 14348
YP_009214915.1 NC_028967_p40 hypothetical protein phrog_919 unknown function unknown function -1 26330 26641
YP_009214898.1 NC_028967_p23 hypothetical protein phrog_1947 unknown function unknown function -1 17757 18041
YP_009214910.1 NC_028967_p35 exonuclease phrog_1870 exonuclease DNA, RNA and nucleotide metabolism -1 23818 24759
YP_009214907.1 NC_028967_p32 DNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 22006 22869
YP_009214904.1 NC_028967_p29 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 20781 21452
YP_009214912.1 NC_028967_p37 hypothetical protein phrog_1937 unknown function unknown function -1 25224 25427
YP_009214882.1 NC_028967_p7 hypothetical protein phrog_1290 head-tail adaptor connector 1 5606 6085
YP_009214878.1 NC_028967_p3 portal protein phrog_104 portal protein head and packaging 1 1881 3206
YP_009214886.1 NC_028967_p11 major tail subunit phrog_117 major tail protein tail 1 7147 7788
YP_009214889.1 NC_028967_p14 hypothetical protein phrog_106 minor tail protein tail 1 11404 12345
YP_009214908.1 NC_028967_p33 hypothetical protein phrog_1288 unknown function unknown function -1 22910 23377