| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028976 |
Definition |
Streptomyces phage Izzy, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus. |
DB of origin |
REFSEQ |
Length |
50113 |
Host Name |
Streptomyces griseus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
75 |
%GC |
65.91 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009215428.1 | NC_028976_p50 | serine integrase | phrog_95 | integrase | integration and excision | 1 | 34419 | 35741 |
| YP_009215414.1 | NC_028976_p36 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 26634 | 27389 |
| YP_009215422.1 | NC_028976_p44 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 29585 | 30772 |
| YP_009215410.1 | NC_028976_p32 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 23931 | 24908 |
| YP_009215448.1 | NC_028976_p70 | hypothetical protein | phrog_2355 | unknown function | unknown function | -1 | 46405 | 46812 |
| YP_009215405.1 | NC_028976_p27 | endolysin | phrog_1493 | endolysin | lysis | 1 | 21391 | 22332 |
| YP_009215380.1 | NC_028976_p2 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 793 | 1107 |
| YP_009215389.1 | NC_028976_p11 | major capsid protein | phrog_283 | major head protein | head and packaging | 1 | 7461 | 8534 |
| YP_009215404.1 | NC_028976_p26 | hypothetical protein | phrog_3534 | unknown function | unknown function | 1 | 21007 | 21360 |
| YP_009215400.1 | NC_028976_p22 | hypothetical protein | phrog_1276 | unknown function | unknown function | 1 | 17270 | 17566 |
| YP_009215451.1 | NC_028976_p73 | hypothetical protein | phrog_3994 | unknown function | unknown function | -1 | 48020 | 48445 |
| YP_009215390.1 | NC_028976_p12 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8605 | 9057 |
| YP_009215452.1 | NC_028976_p74 | hypothetical protein | phrog_4485 | unknown function | unknown function | -1 | 48537 | 48683 |
| YP_009215438.1 | NC_028976_p60 | hypothetical protein | phrog_5209 | unknown function | unknown function | -1 | 42534 | 42845 |
| YP_009215423.1 | NC_028976_p45 | hypothetical protein | phrog_1340 | unknown function | unknown function | 1 | 30799 | 31155 |
| YP_009215406.1 | NC_028976_p28 | hypothetical protein | phrog_4092 | unknown function | unknown function | 1 | 22329 | 22595 |
| YP_009215412.1 | NC_028976_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | 1 | 25596 | 26033 |
| YP_009215439.1 | NC_028976_p61 | hypothetical protein | phrog_3991 | unknown function | unknown function | -1 | 42842 | 43123 |
| YP_009215440.1 | NC_028976_p62 | hypothetical protein | phrog_11825 | unknown function | unknown function | -1 | 43116 | 43304 |
| YP_009215427.1 | NC_028976_p49 | Lsr2-like protein | phrog_6509 | Lsr2-like DNA bridging protein | DNA, RNA and nucleotide metabolism | 1 | 34144 | 34362 |
| YP_009215401.1 | NC_028976_p23 | hypothetical protein | phrog_4013 | unknown function | unknown function | 1 | 17568 | 19211 |
| YP_009215397.1 | NC_028976_p19 | tapemeasure | phrog_305 | tail length tape measure protein | tail | 1 | 11879 | 15199 |
| YP_009215403.1 | NC_028976_p25 | hypothetical protein | phrog_988 | tail protein | tail | 1 | 19733 | 21007 |
| YP_009215444.1 | NC_028976_p66 | HNH domain protein | phrog_4842 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 44723 | 45187 |
| YP_009215379.1 | NC_028976_p1 | hypothetical protein | phrog_4207 | unknown function | unknown function | -1 | 91 | 297 |
| YP_009215388.1 | NC_028976_p10 | scaffold protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 6843 | 7391 |
| YP_009215394.1 | NC_028976_p16 | hypothetical protein | phrog_117 | major tail protein | tail | 1 | 10305 | 11048 |
| YP_009215392.1 | NC_028976_p14 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 9455 | 9787 |
| YP_009215435.1 | NC_028976_p57 | hypothetical protein | phrog_3965 | unknown function | unknown function | -1 | 41020 | 41451 |
| YP_009215402.1 | NC_028976_p24 | hypothetical protein | phrog_18853 | unknown function | unknown function | 1 | 19249 | 19662 |
| YP_009215399.1 | NC_028976_p21 | hypothetical protein | phrog_538 | minor tail protein | tail | 1 | 16064 | 17266 |
| YP_009215429.1 | NC_028976_p51 | hypothetical protein | phrog_9533 | unknown function | unknown function | -1 | 35890 | 36093 |
| YP_009215442.1 | NC_028976_p64 | hypothetical protein | phrog_4785 | unknown function | unknown function | -1 | 43860 | 44147 |
| YP_009215409.1 | NC_028976_p31 | hypothetical protein | phrog_5250 | unknown function | unknown function | 1 | 23566 | 23934 |
| YP_009215424.1 | NC_028976_p46 | hypothetical protein | phrog_3512 | sigma factor | transcription regulation | 1 | 31152 | 31550 |
| YP_009215382.1 | NC_028976_p4 | hypothetical protein | phrog_3555 | unknown function | unknown function | 1 | 1665 | 1895 |
| YP_009215421.1 | NC_028976_p43 | hypothetical protein | phrog_3979 | unknown function | unknown function | 1 | 29391 | 29588 |
| YP_009215398.1 | NC_028976_p20 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 15203 | 16060 |
| YP_009215443.1 | NC_028976_p65 | hypothetical protein | phrog_4867 | unknown function | unknown function | -1 | 44266 | 44631 |
| YP_009215416.1 | NC_028976_p38 | hypothetical protein | phrog_4673 | unknown function | unknown function | 1 | 27817 | 27969 |
| YP_009215385.1 | NC_028976_p7 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 2609 | 4255 |
| YP_009215434.1 | NC_028976_p56 | hypothetical protein | phrog_3424 | unknown function | unknown function | -1 | 40770 | 41006 |
| YP_009215449.1 | NC_028976_p71 | hypothetical protein | phrog_4275 | unknown function | unknown function | -1 | 46841 | 46975 |
| YP_009215411.1 | NC_028976_p33 | hypothetical protein | phrog_3912 | unknown function | unknown function | 1 | 25036 | 25536 |
| YP_009215417.1 | NC_028976_p39 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 27956 | 28390 |
| YP_009215384.1 | NC_028976_p6 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 2163 | 2588 |
| YP_009215386.1 | NC_028976_p8 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 4288 | 5730 |
| YP_009215446.1 | NC_028976_p68 | hypothetical protein | phrog_4239 | unknown function | unknown function | -1 | 45526 | 45945 |
| YP_009215450.1 | NC_028976_p72 | hypothetical protein | phrog_4313 | unknown function | unknown function | -1 | 47088 | 47906 |
| YP_009215395.1 | NC_028976_p17 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 11160 | 11875 |
| YP_009215396.1 | NC_028976_p18 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 11160 | 11483 |
| YP_009215408.1 | NC_028976_p30 | immunity repressor | phrog_3929 | transcriptional repressor | transcription regulation | 1 | 22996 | 23448 |
| YP_009215447.1 | NC_028976_p69 | hypothetical protein | phrog_6619 | unknown function | unknown function | -1 | 46066 | 46329 |
| YP_009215436.1 | NC_028976_p58 | hypothetical protein | phrog_4024 | unknown function | unknown function | -1 | 41525 | 41902 |
| YP_009215445.1 | NC_028976_p67 | hypothetical protein | phrog_3908 | unknown function | unknown function | -1 | 45296 | 45523 |
| YP_009215453.1 | NC_028976_p75 | hypothetical protein | phrog_2563 | unknown function | unknown function | -1 | 48779 | 49165 |
| YP_009215383.1 | NC_028976_p5 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 1901 | 2149 |
| YP_009215437.1 | NC_028976_p59 | dNMP kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 41947 | 42537 |
| YP_009215425.1 | NC_028976_p47 | hypothetical protein | phrog_4123 | unknown function | unknown function | 1 | 31547 | 31912 |
| YP_009215441.1 | NC_028976_p63 | hypothetical protein | phrog_2650 | unknown function | unknown function | -1 | 43316 | 43768 |
| YP_009215430.1 | NC_028976_p52 | ThyX | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 36090 | 36803 |
| YP_009215387.1 | NC_028976_p9 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 5727 | 6839 |
| YP_009215418.1 | NC_028976_p40 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 28383 | 28889 |
| YP_009215432.1 | NC_028976_p54 | hypothetical protein | phrog_5971 | unknown function | unknown function | -1 | 37075 | 37212 |
| YP_009215420.1 | NC_028976_p42 | hypothetical protein | phrog_6217 | unknown function | unknown function | 1 | 29239 | 29394 |
| YP_009215426.1 | NC_028976_p48 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | 1 | 32007 | 34097 |
| YP_009215419.1 | NC_028976_p41 | hypothetical protein | phrog_4022 | unknown function | unknown function | 1 | 28886 | 29242 |
| YP_009215431.1 | NC_028976_p53 | hypothetical protein | phrog_4071 | unknown function | unknown function | -1 | 36800 | 37072 |
| YP_009215413.1 | NC_028976_p35 | dCMP deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 26089 | 26577 |
| YP_009215415.1 | NC_028976_p37 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 27458 | 27820 |
| YP_009215391.1 | NC_028976_p13 | head-tail adaptor | phrog_320 | head closure Hc1 | connector | 1 | 9054 | 9389 |
| YP_009215393.1 | NC_028976_p15 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 9787 | 10290 |
| YP_009215381.1 | NC_028976_p3 | hypothetical protein | phrog_35921 | unknown function | unknown function | 1 | 1314 | 1589 |
| YP_009215407.1 | NC_028976_p29 | hypothetical protein | phrog_4061 | unknown function | unknown function | -1 | 22651 | 22911 |
| YP_009215433.1 | NC_028976_p55 | DNA polymerase III subunit alpha | phrog_405 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 37294 | 40773 |