Genomic map of Mycobacterium phage Murucutumbu (NC_028978)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028978
Definition
Mycobacterium phage Murucutumbu, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
REFSEQ
Length
60609
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
95
%GC
66.69
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009215524.1 NC_028978_p20 tapemeasure phrog_971 endolysin lysis 1 12036 15869
YP_009215542.1 NC_028978_p38 hypothetical protein phrog_7081 unknown function unknown function 1 31387 31785
YP_009215528.1 NC_028978_p24 minor tail subunit phrog_1565 minor tail protein tail 1 19434 20516
YP_009215593.1 NC_028978_p89 hypothetical protein phrog_5812 unknown function unknown function 1 57849 58478
YP_009215548.1 NC_028978_p44 HTH binding protein phrog_1702 transcriptional repressor transcription regulation 1 36105 36386
YP_009215549.1 NC_028978_p45 HTH binding protein phrog_1840 excisionase integration and excision 1 36383 36649
YP_009215585.1 NC_028978_p81 hypothetical protein phrog_5794 unknown function unknown function 1 54127 54387
YP_009215535.1 NC_028978_p31 holin phrog_565 holin lysis 1 27289 27729
YP_009215572.1 NC_028978_p68 hypothetical protein phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 45130 45501
YP_009215543.1 NC_028978_p39 hypothetical protein phrog_1279 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 31891 32745
YP_009215511.1 NC_028978_p7 terminase phrog_2 terminase large subunit head and packaging 1 1562 2983
YP_009215507.1 NC_028978_p3 hypothetical protein phrog_2074 unknown function unknown function 1 452 706
YP_009215531.1 NC_028978_p27 hypothetical protein phrog_416 minor tail protein tail 1 23275 24288
YP_009215559.1 NC_028978_p55 hypothetical protein phrog_1956 unknown function unknown function 1 40479 40757
YP_009215587.1 NC_028978_p83 hypothetical protein phrog_6426 unknown function unknown function 1 54575 54727
YP_009215590.1 NC_028978_p86 hypothetical protein phrog_2822 unknown function unknown function 1 56412 56960
YP_009215563.1 NC_028978_p59 hypothetical protein phrog_2870 unknown function unknown function 1 41776 42096
YP_009215589.1 NC_028978_p85 hypothetical protein phrog_3167 unknown function unknown function 1 56026 56412
YP_009215556.1 NC_028978_p52 hypothetical protein phrog_542 unknown function unknown function 1 39542 39712
YP_009215567.1 NC_028978_p63 hypothetical protein phrog_9435 unknown function unknown function 1 43386 43865
YP_009215575.1 NC_028978_p71 hypothetical protein phrog_3478 unknown function unknown function 1 49261 49722
YP_009215512.1 NC_028978_p8 portal protein phrog_104 portal protein head and packaging 1 2995 4548
YP_009215558.1 NC_028978_p54 hypothetical protein phrog_3186 unknown function unknown function 1 40098 40478
YP_009215583.1 NC_028978_p79 hypothetical protein phrog_2342 unknown function unknown function 1 52767 53657
YP_009215508.1 NC_028978_p4 hypothetical protein phrog_2293 unknown function unknown function 1 703 930
YP_009215579.1 NC_028978_p75 hypothetical protein phrog_1338 unknown function unknown function 1 51352 51627
YP_009215598.1 NC_028978_p94 hypothetical protein phrog_5633 unknown function unknown function 1 60118 60252
YP_009215546.1 NC_028978_p42 hypothetical protein phrog_950 unknown function unknown function -1 34661 35542
YP_009215529.1 NC_028978_p25 minor tail subunit phrog_1736 minor tail protein tail 1 20523 20831
YP_009215515.1 NC_028978_p11 scaffold protein phrog_1793 head scaffolding protein head and packaging 1 7273 7815
YP_009215514.1 NC_028978_p10 hypothetical protein phrog_1757 unknown function unknown function 1 7054 7239
YP_009215530.1 NC_028978_p26 minor tail subunit phrog_346 minor tail protein tail 1 20831 23263
YP_009215586.1 NC_028978_p82 hypothetical protein phrog_666 unknown function unknown function 1 54402 54578
YP_009215547.1 NC_028978_p43 HTH binding protein phrog_1746 transcriptional repressor transcription regulation -1 35590 35967
YP_009215522.1 NC_028978_p18 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11191 12035
YP_009215561.1 NC_028978_p57 DnaQ-like protein phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40959 41513
YP_009215555.1 NC_028978_p51 hypothetical protein phrog_2781 unknown function unknown function 1 38586 39530
YP_009215584.1 NC_028978_p80 hypothetical protein phrog_3868 unknown function unknown function 1 53654 54130
YP_009215595.1 NC_028978_p91 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 58828 59043
YP_009215523.1 NC_028978_p19 tail assembly chaperone phrog_1861 unknown function unknown function 1 11191 11625
YP_009215573.1 NC_028978_p69 DNA primase/helicase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 45543 48161
YP_009215541.1 NC_028978_p37 hypothetical protein phrog_2433 unknown function unknown function 1 30585 31271
YP_009215526.1 NC_028978_p22 minor tail subunit phrog_110 minor tail protein tail 1 17106 18872
YP_009215532.1 NC_028978_p28 hypothetical protein phrog_240 head protein head and packaging 1 24370 24741
YP_009215527.1 NC_028978_p23 minor tail subunit phrog_1697 minor tail protein tail 1 18872 19348
YP_009215516.1 NC_028978_p12 major capsid protein phrog_10 major head protein head and packaging 1 7891 8826
YP_009215582.1 NC_028978_p78 hypothetical protein phrog_5776 unknown function unknown function 1 52642 52770
YP_009215570.1 NC_028978_p66 hypothetical protein phrog_1911 unknown function unknown function 1 44280 44789
YP_009215537.1 NC_028978_p33 hypothetical protein phrog_1738 unknown function unknown function 1 28088 28339
YP_009215577.1 NC_028978_p73 peptidase phrog_908 unknown function unknown function 1 49919 51109
YP_009215578.1 NC_028978_p74 hypothetical protein phrog_4269 unknown function unknown function 1 51122 51355
YP_009215588.1 NC_028978_p84 RtcB phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 54836 56029
YP_009215540.1 NC_028978_p36 hypothetical protein phrog_4112 unknown function unknown function 1 30155 30508
YP_009215521.1 NC_028978_p17 major tail subunit phrog_117 major tail protein tail 1 10456 11067
YP_009215574.1 NC_028978_p70 RusA phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 48570 49268
YP_009215564.1 NC_028978_p60 hypothetical protein phrog_1498 unknown function unknown function 1 42093 42257
YP_009215538.1 NC_028978_p34 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28326 29534
YP_009215518.1 NC_028978_p14 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 9315 9671
YP_009215539.1 NC_028978_p35 hypothetical protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29727 30158
YP_009215571.1 NC_028978_p67 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 44888 45130
YP_009215576.1 NC_028978_p72 hypothetical protein phrog_6689 unknown function unknown function 1 49719 49922
YP_009215566.1 NC_028978_p62 hypothetical protein phrog_3492 unknown function unknown function 1 43138 43332
YP_009215520.1 NC_028978_p16 head-to-tail connector protein phrog_123 tail terminator connector 1 9930 10355
YP_009215536.1 NC_028978_p32 hypothetical protein phrog_3413 unknown function unknown function 1 27729 28091
YP_009215517.1 NC_028978_p13 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 8938 9318
YP_009215592.1 NC_028978_p88 HTH DNA binding protein phrog_3665 unknown function unknown function 1 57519 57680
YP_009215519.1 NC_028978_p15 head-to-tail connector protein phrog_387 neck protein connector 1 9652 9933
YP_009215509.1 NC_028978_p5 hypothetical protein phrog_2622 unknown function unknown function 1 1155 1358
YP_009215569.1 NC_028978_p65 hypothetical protein phrog_2388 unknown function unknown function 1 44077 44196
YP_009215557.1 NC_028978_p53 hypothetical protein phrog_301 secreted protein other 1 39751 40101
YP_009215591.1 NC_028978_p87 hypothetical protein phrog_2493 unknown function unknown function 1 56968 57522
YP_009215533.1 NC_028978_p29 lysin A phrog_1519 endolysin lysis 1 24760 26409
YP_009215580.1 NC_028978_p76 SprT phrog_1006 unknown function unknown function 1 51702 52163
YP_009215513.1 NC_028978_p9 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4553 7057
YP_009215565.1 NC_028978_p61 hypothetical protein phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 42254 43141
YP_009215510.1 NC_028978_p6 hypothetical protein phrog_1459 terminase small subunit head and packaging 1 1351 1578
YP_009215545.1 NC_028978_p41 integrase phrog_1 integrase integration and excision 1 33469 34557
YP_009215525.1 NC_028978_p21 minor tail subunit phrog_106 minor tail protein tail 1 15969 17105
YP_009215551.1 NC_028978_p47 hypothetical protein phrog_2654 unknown function unknown function 1 37165 37332
YP_009215562.1 NC_028978_p58 hypothetical protein phrog_2596 unknown function unknown function 1 41513 41779
YP_009215554.1 NC_028978_p50 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 38326 38589
YP_009215534.1 NC_028978_p30 lysin B phrog_102 endolysin lysis 1 26406 27278
YP_009215506.1 NC_028978_p2 hypothetical protein phrog_5284 unknown function unknown function 1 270 455
YP_009215597.1 NC_028978_p93 hypothetical protein phrog_4561 unknown function unknown function 1 59843 60073
YP_009215596.1 NC_028978_p92 hypothetical protein phrog_4560 unknown function unknown function 1 59192 59461
YP_009215544.1 NC_028978_p40 hypothetical protein phrog_658 unknown function unknown function -1 32809 33111
YP_009215553.1 NC_028978_p49 HTH binding protein phrog_2286 unknown function unknown function 1 37538 38329
YP_009215599.1 NC_028978_p95 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 60249 60551
YP_009215568.1 NC_028978_p64 hypothetical protein phrog_1581 unknown function unknown function 1 43862 44077
YP_009215560.1 NC_028978_p56 hypothetical protein phrog_4832 unknown function unknown function 1 40754 40948
YP_009215594.1 NC_028978_p90 hypothetical protein phrog_5243 unknown function unknown function 1 58510 58707
YP_009215581.1 NC_028978_p77 hypothetical protein phrog_2974 unknown function unknown function 1 52281 52556
YP_009215550.1 NC_028978_p46 hypothetical protein phrog_2908 unknown function unknown function 1 36651 36992
YP_009215505.1 NC_028978_p1 hypothetical protein phrog_4624 unknown function unknown function 1 79 273
YP_009215552.1 NC_028978_p48 hypothetical protein phrog_3903 unknown function unknown function 1 37329 37541