Genomic map of Mycobacterium phage Cheetobro (NC_028979)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028979
Definition
Mycobacterium phage Cheetobro, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
REFSEQ
Length
57253
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
92
%GC
67.96
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009215678.1 NC_028979_p79 hypothetical protein phrog_2493 unknown function unknown function 1 50710 51192
YP_009215650.1 NC_028979_p51 hypothetical protein phrog_11977 unknown function unknown function 1 37084 37314
YP_009215609.1 NC_028979_p10 portal protein phrog_104 portal protein head and packaging 1 3932 5518
YP_009215601.1 NC_028979_p2 hypothetical protein phrog_2074 unknown function unknown function 1 251 481
YP_009215652.1 NC_028979_p53 hypothetical protein phrog_658 unknown function unknown function 1 37615 37965
YP_009215661.1 NC_028979_p62 hypothetical protein phrog_1498 unknown function unknown function 1 40754 40918
YP_009215614.1 NC_028979_p15 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 10244 10618
YP_009215637.1 NC_028979_p38 hypothetical protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 31066 31392
YP_009215628.1 NC_028979_p29 hypothetical protein phrog_416 minor tail protein tail 1 24593 25597
YP_009215629.1 NC_028979_p30 hypothetical protein phrog_240 head protein head and packaging 1 25619 25996
YP_009215623.1 NC_028979_p24 minor tail protein phrog_110 minor tail protein tail 1 18630 20417
YP_009215682.1 NC_028979_p83 hypothetical protein phrog_16540 unknown function unknown function 1 52350 52727
YP_009215624.1 NC_028979_p25 hypothetical protein phrog_1697 minor tail protein tail 1 20418 20936
YP_009215630.1 NC_028979_p31 lysin A phrog_317 endolysin lysis 1 26027 27637
YP_009215651.1 NC_028979_p52 endonuclease phrog_12473 endonuclease DNA, RNA and nucleotide metabolism 1 37311 37622
YP_009215621.1 NC_028979_p22 tapemeasure protein phrog_971 endolysin lysis 1 13324 17496
YP_009215654.1 NC_028979_p55 hypothetical protein phrog_2286 unknown function unknown function 1 38208 38900
YP_009215602.1 NC_028979_p3 hypothetical protein phrog_542 unknown function unknown function 1 478 645
YP_009215646.1 NC_028979_p47 CI repressor phrog_1702 transcriptional repressor transcription regulation 1 36166 36414
YP_009215638.1 NC_028979_p39 hypothetical protein phrog_1338 unknown function unknown function 1 31424 31723
YP_009215653.1 NC_028979_p54 hypothetical protein phrog_1622 unknown function unknown function 1 37965 38204
YP_009215674.1 NC_028979_p75 recombination endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism 1 48349 48849
YP_009215677.1 NC_028979_p78 hypothetical protein phrog_12502 unknown function unknown function 1 50507 50713
YP_009215681.1 NC_028979_p82 hypothetical protein phrog_2974 unknown function unknown function 1 52063 52332
YP_009215617.1 NC_028979_p18 hypothetical protein phrog_123 tail terminator connector 1 11221 11646
YP_009215672.1 NC_028979_p73 DNA primase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 45111 47732
YP_009215656.1 NC_028979_p57 hypothetical protein phrog_14062 unknown function unknown function 1 39283 39492
YP_009215676.1 NC_028979_p77 hypothetical protein phrog_908 unknown function unknown function 1 49632 50510
YP_009215662.1 NC_028979_p63 exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 40915 41778
YP_009215622.1 NC_028979_p23 minor tail protein phrog_106 minor tail protein tail 1 17497 18630
YP_009215685.1 NC_028979_p86 hypothetical protein phrog_11871 unknown function unknown function 1 53154 53507
YP_009215647.1 NC_028979_p48 Xis phrog_66 excisionase and transcriptional regulator integration and excision 1 36411 36596
YP_009215683.1 NC_028979_p84 hypothetical protein phrog_7536 unknown function unknown function 1 52724 52897
YP_009215620.1 NC_028979_p21 tail assembly chaperone phrog_1861 unknown function unknown function 1 12441 12890
YP_009215670.1 NC_028979_p71 hypothetical protein phrog_12554 unknown function unknown function 1 44479 44649
YP_009215684.1 NC_028979_p85 hypothetical protein phrog_12916 unknown function unknown function 1 53002 53157
YP_009215689.1 NC_028979_p90 hypothetical protein phrog_14339 unknown function unknown function 1 56125 56337
YP_009215668.1 NC_028979_p69 nrdh-like glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 43374 43637
YP_009215665.1 NC_028979_p66 hypothetical protein phrog_12856 unknown function unknown function 1 42133 42414
YP_009215687.1 NC_028979_p88 hypothetical protein phrog_2433 unknown function unknown function 1 54451 55158
YP_009215606.1 NC_028979_p7 hypothetical protein phrog_2622 unknown function unknown function 1 1998 2237
YP_009215613.1 NC_028979_p14 major capsid protein phrog_10 major head protein head and packaging 1 9175 10104
YP_009215632.1 NC_028979_p33 holin phrog_565 holin lysis 1 28468 28866
YP_009215675.1 NC_028979_p76 hypothetical protein phrog_12358 unknown function unknown function 1 48846 49607
YP_009215643.1 NC_028979_p44 integrage phrog_1 integrase integration and excision 1 33528 34793
YP_009215657.1 NC_028979_p58 hypothetical protein phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 39489 39710
YP_009215615.1 NC_028979_p16 hypothetical protein phrog_763 head-tail adaptor connector 1 10621 10977
YP_009215611.1 NC_028979_p12 hypothetical protein phrog_1757 unknown function unknown function 1 8255 8452
YP_009215669.1 NC_028979_p70 DNA-methylase phrog_67 DNA methyltransferase other 1 43634 44479
YP_009215655.1 NC_028979_p56 hypothetical protein phrog_474 phosphofructokinase other 1 38897 39286
YP_009215635.1 NC_028979_p36 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 29442 30632
YP_009215626.1 NC_028979_p27 hypothetical protein phrog_1736 minor tail protein tail 1 22042 22287
YP_009215673.1 NC_028979_p74 hypothetical protein phrog_10480 unknown function unknown function 1 47987 48361
YP_009215618.1 NC_028979_p19 major tail subunit phrog_117 major tail protein tail 1 11727 12338
YP_009215691.1 NC_028979_p92 methyltransferase phrog_2675 DNA methyltransferase other 1 56646 57221
YP_009215666.1 NC_028979_p67 hypothetical protein phrog_2388 unknown function unknown function 1 42411 42527
YP_009215610.1 NC_028979_p11 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 5499 8258
YP_009215660.1 NC_028979_p61 DNA polymerase phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40158 40754
YP_009215607.1 NC_028979_p8 hypothetical protein phrog_1459 terminase small subunit head and packaging 1 2234 2506
YP_009215619.1 NC_028979_p20 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 12441 13321
YP_009215680.1 NC_028979_p81 hypothetical protein phrog_14347 unknown function unknown function 1 51923 52033
YP_009215639.1 NC_028979_p40 hypothetical protein phrog_7217 unknown function unknown function 1 31720 32022
YP_009215688.1 NC_028979_p89 hypothetical protein phrog_4095 unknown function unknown function 1 55247 55954
YP_009215636.1 NC_028979_p37 hypothetical protein phrog_1042 unknown function unknown function 1 30635 30916
YP_009215686.1 NC_028979_p87 hypothetical protein phrog_5436 unknown function unknown function 1 53586 54386
YP_009215659.1 NC_028979_p60 hypothetical protein phrog_13940 unknown function unknown function 1 40078 40161
YP_009215642.1 NC_028979_p43 hypothetical protein phrog_806 unknown function unknown function -1 32766 33290
YP_009215604.1 NC_028979_p5 hypothetical protein phrog_1454 unknown function unknown function 1 924 1286
YP_009215608.1 NC_028979_p9 terminase phrog_2 terminase large subunit head and packaging 1 2478 3920
YP_009215664.1 NC_028979_p65 hypothetical protein phrog_1581 unknown function unknown function 1 41918 42136
YP_009215627.1 NC_028979_p28 minor tail protein phrog_746 minor tail protein tail 1 22280 24589
YP_009215605.1 NC_028979_p6 hypothetical protein phrog_7999 unknown function unknown function 1 1286 1972
YP_009215600.1 NC_028979_p1 hypothetical protein phrog_5391 unknown function unknown function 1 117 254
YP_009215616.1 NC_028979_p17 hypothetical protein phrog_387 neck protein connector 1 10964 11224
YP_009215633.1 NC_028979_p34 hypothetical protein phrog_3413 unknown function unknown function 1 28863 29198
YP_009215663.1 NC_028979_p64 hypothetical protein phrog_10545 unknown function unknown function 1 41778 41921
YP_009215631.1 NC_028979_p32 lysin B phrog_102 endolysin lysis 1 27637 28428
YP_009215640.1 NC_028979_p41 hypothetical protein phrog_3851 unknown function unknown function 1 32015 32404
YP_009215671.1 NC_028979_p72 hypothetical protein phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44639 45019
YP_009215658.1 NC_028979_p59 hypothetical protein phrog_1956 unknown function unknown function 1 39803 40078
YP_009215690.1 NC_028979_p91 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 56341 56646
YP_009215641.1 NC_028979_p42 hypothetical protein phrog_8324 unknown function unknown function 1 32401 32667
YP_009215634.1 NC_028979_p35 hypothetical protein phrog_1738 unknown function unknown function 1 29195 29455
YP_009215645.1 NC_028979_p46 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 35676 36035
YP_009215625.1 NC_028979_p26 minor tail protein phrog_1565 minor tail protein tail 1 20933 22030
YP_009215649.1 NC_028979_p50 hypothetical protein phrog_2654 unknown function unknown function 1 36905 37087
YP_009215603.1 NC_028979_p4 hypothetical protein phrog_5972 unknown function unknown function 1 658 927
YP_009215667.1 NC_028979_p68 hypothetical protein phrog_1911 unknown function unknown function 1 42598 43266
YP_009215612.1 NC_028979_p13 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 8544 9116
YP_009215648.1 NC_028979_p49 hypothetical protein phrog_14099 unknown function unknown function 1 36601 36861
YP_009215644.1 NC_028979_p45 hypothetical protein phrog_950 unknown function unknown function -1 34774 35592
YP_009215679.1 NC_028979_p80 hypothetical protein phrog_1006 unknown function unknown function 1 51228 51812