Genomic map of Acinetobacter phage vB_AbaM_IME200 (NC_028987)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028987
Definition
Acinetobacter phage vB_AbaM_IME200, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Beijerinckvirinae; Friunavirus.
DB of origin
REFSEQ
Length
41243
Host Name
Acinetobacter baumannii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
39.31
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009216529.1 NC_028987_p34 hypothetical protein phrog_5394 unknown function unknown function 1 21417 21614
YP_009216509.1 NC_028987_p14 hypothetical protein phrog_7955 unknown function unknown function 1 5985 6176
YP_009268879.1 NC_028987_p44 hypothetical protein phrog_2083 internal virion lysozyme motif head and packaging 1 29572 32457
YP_009216490.1 NC_028987_p47 hypothetical protein phrog_126 holin/anti-holin lysis 1 37666 38001
YP_009216498.1 NC_028987_p3 hypothetical protein phrog_1448 unknown function unknown function 1 2094 2603
YP_009216528.1 NC_028987_p33 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 18894 21311
YP_009216518.1 NC_028987_p23 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11228 13525
YP_009216524.1 NC_028987_p29 hypothetical protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 16290 16859
YP_009216501.1 NC_028987_p6 hypothetical protein phrog_4445 unknown function unknown function 1 3070 3303
YP_009216520.1 NC_028987_p25 hypothetical protein phrog_862 unknown function unknown function 1 13959 14849
YP_009216504.1 NC_028987_p9 hypothetical protein phrog_9054 unknown function unknown function 1 4131 4247
YP_009216513.1 NC_028987_p18 hypothetical protein phrog_7630 unknown function unknown function 1 7395 7712
YP_009216525.1 NC_028987_p30 DNA endonuclease phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 16856 17296
YP_009216532.1 NC_028987_p37 scaffolding protein phrog_1018 head scaffolding protein head and packaging 1 23436 24296
YP_009216535.1 NC_028987_p40 hypothetical protein phrog_7599 unknown function unknown function 1 25594 25887
YP_009216502.1 NC_028987_p7 hypothetical protein phrog_7131 unknown function unknown function 1 3378 3974
YP_009216499.1 NC_028987_p4 hypothetical protein phrog_6323 unknown function unknown function 1 2605 2979
YP_009216530.1 NC_028987_p35 hypothetical protein phrog_4893 unknown function unknown function 1 21611 21862
YP_009216516.1 NC_028987_p21 hypothetical protein phrog_14634 DNA binding protein DNA, RNA and nucleotide metabolism 1 9268 10005
YP_009216521.1 NC_028987_p26 hypothetical protein phrog_10210 unknown function unknown function 1 14906 15025
YP_009216495.1 NC_028987_p52 hypothetical protein phrog_6687 unknown function unknown function 1 40952 41155
YP_009216534.1 NC_028987_p39 hypothetical protein phrog_6633 tail protein tail 1 25397 25582
YP_009216536.1 NC_028987_p41 tail tubular protein A phrog_446 tail protein tail 1 26028 26588
YP_009216522.1 NC_028987_p27 hypothetical protein phrog_5437 unknown function unknown function 1 15022 15354
YP_009216500.1 NC_028987_p5 hypothetical protein phrog_11839 membrane protein moron, auxiliary metabolic gene and host takeover 1 2970 3083
YP_009216526.1 NC_028987_p31 hypothetical protein phrog_221 metallo-phosphoesterase other 1 17300 18235
YP_009216514.1 NC_028987_p19 hypothetical protein phrog_7038 unknown function unknown function 1 7712 7954
YP_009216511.1 NC_028987_p16 hypothetical protein phrog_2827 unknown function unknown function 1 6381 6605
YP_009216527.1 NC_028987_p32 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 18235 18885
YP_009216494.1 NC_028987_p51 hypothetical protein phrog_8403 DNA binding protein DNA, RNA and nucleotide metabolism 1 40858 40995
YP_009216497.1 NC_028987_p2 hypothetical protein phrog_2827 unknown function unknown function 1 1554 2024
YP_009216492.1 NC_028987_p49 hypothetical protein phrog_891 terminase small subunit head and packaging 1 38606 38914
YP_009216508.1 NC_028987_p13 hypothetical protein phrog_7079 unknown function unknown function 1 5831 5998
YP_009216493.1 NC_028987_p50 DNA maturase B phrog_38 terminase large subunit head and packaging 1 38924 40861
YP_009216491.1 NC_028987_p48 endolysin phrog_181 endolysin lysis 1 37988 38545
YP_009216531.1 NC_028987_p36 head-tail connector protein phrog_449 head-tail adaptor connector 1 21871 23427
YP_009268877.1 NC_028987_p8 hypothetical protein phrog_38792 unknown function unknown function 1 3971 4150
YP_009216519.1 NC_028987_p24 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 13534 13956
YP_009216517.1 NC_028987_p22 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 10002 10979
YP_009216537.1 NC_028987_p42 tail tubular protein B phrog_457 tail protein tail 1 26597 28888
YP_009216488.1 NC_028987_p45 internal virion core protein phrog_342 internal virion protein with endolysin domain head and packaging 1 32467 35565
YP_009216515.1 NC_028987_p20 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 7967 9265
YP_009216510.1 NC_028987_p15 hypothetical protein phrog_2827 unknown function unknown function 1 6173 6391
YP_009216512.1 NC_028987_p17 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 6595 7395
YP_009216533.1 NC_028987_p38 capsid protein phrog_267 major head protein head and packaging 1 24312 25343
YP_009216507.1 NC_028987_p12 hypothetical protein phrog_7359 unknown function unknown function 1 5383 5820
YP_009216506.1 NC_028987_p11 hypothetical protein phrog_6421 unknown function unknown function 1 4881 5381
YP_009216505.1 NC_028987_p10 hypothetical protein phrog_6769 unknown function unknown function 1 4405 4803
YP_009268878.1 NC_028987_p28 DNA exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15347 16300
YP_009216496.1 NC_028987_p1 hypothetical protein phrog_10124 unknown function unknown function 1 916 1122
YP_009216489.1 NC_028987_p46 tail fiber protein phrog_3918 tail fiber protein tail 1 35572 37653
YP_009216538.1 NC_028987_p43 hypothetical protein phrog_6056 internal virion protein head and packaging 1 28888 29559