| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028987 |
Definition |
Acinetobacter phage vB_AbaM_IME200, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Beijerinckvirinae; Friunavirus. |
DB of origin |
REFSEQ |
Length |
41243 |
Host Name |
Acinetobacter baumannii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
39.31 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009216529.1 | NC_028987_p34 | hypothetical protein | phrog_5394 | unknown function | unknown function | 1 | 21417 | 21614 |
| YP_009216509.1 | NC_028987_p14 | hypothetical protein | phrog_7955 | unknown function | unknown function | 1 | 5985 | 6176 |
| YP_009268879.1 | NC_028987_p44 | hypothetical protein | phrog_2083 | internal virion lysozyme motif | head and packaging | 1 | 29572 | 32457 |
| YP_009216490.1 | NC_028987_p47 | hypothetical protein | phrog_126 | holin/anti-holin | lysis | 1 | 37666 | 38001 |
| YP_009216498.1 | NC_028987_p3 | hypothetical protein | phrog_1448 | unknown function | unknown function | 1 | 2094 | 2603 |
| YP_009216528.1 | NC_028987_p33 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 18894 | 21311 |
| YP_009216518.1 | NC_028987_p23 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 11228 | 13525 |
| YP_009216524.1 | NC_028987_p29 | hypothetical protein | phrog_1614 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | 1 | 16290 | 16859 |
| YP_009216501.1 | NC_028987_p6 | hypothetical protein | phrog_4445 | unknown function | unknown function | 1 | 3070 | 3303 |
| YP_009216520.1 | NC_028987_p25 | hypothetical protein | phrog_862 | unknown function | unknown function | 1 | 13959 | 14849 |
| YP_009216504.1 | NC_028987_p9 | hypothetical protein | phrog_9054 | unknown function | unknown function | 1 | 4131 | 4247 |
| YP_009216513.1 | NC_028987_p18 | hypothetical protein | phrog_7630 | unknown function | unknown function | 1 | 7395 | 7712 |
| YP_009216525.1 | NC_028987_p30 | DNA endonuclease | phrog_423 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 16856 | 17296 |
| YP_009216532.1 | NC_028987_p37 | scaffolding protein | phrog_1018 | head scaffolding protein | head and packaging | 1 | 23436 | 24296 |
| YP_009216535.1 | NC_028987_p40 | hypothetical protein | phrog_7599 | unknown function | unknown function | 1 | 25594 | 25887 |
| YP_009216502.1 | NC_028987_p7 | hypothetical protein | phrog_7131 | unknown function | unknown function | 1 | 3378 | 3974 |
| YP_009216499.1 | NC_028987_p4 | hypothetical protein | phrog_6323 | unknown function | unknown function | 1 | 2605 | 2979 |
| YP_009216530.1 | NC_028987_p35 | hypothetical protein | phrog_4893 | unknown function | unknown function | 1 | 21611 | 21862 |
| YP_009216516.1 | NC_028987_p21 | hypothetical protein | phrog_14634 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 9268 | 10005 |
| YP_009216521.1 | NC_028987_p26 | hypothetical protein | phrog_10210 | unknown function | unknown function | 1 | 14906 | 15025 |
| YP_009216495.1 | NC_028987_p52 | hypothetical protein | phrog_6687 | unknown function | unknown function | 1 | 40952 | 41155 |
| YP_009216534.1 | NC_028987_p39 | hypothetical protein | phrog_6633 | tail protein | tail | 1 | 25397 | 25582 |
| YP_009216536.1 | NC_028987_p41 | tail tubular protein A | phrog_446 | tail protein | tail | 1 | 26028 | 26588 |
| YP_009216522.1 | NC_028987_p27 | hypothetical protein | phrog_5437 | unknown function | unknown function | 1 | 15022 | 15354 |
| YP_009216500.1 | NC_028987_p5 | hypothetical protein | phrog_11839 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 2970 | 3083 |
| YP_009216526.1 | NC_028987_p31 | hypothetical protein | phrog_221 | metallo-phosphoesterase | other | 1 | 17300 | 18235 |
| YP_009216514.1 | NC_028987_p19 | hypothetical protein | phrog_7038 | unknown function | unknown function | 1 | 7712 | 7954 |
| YP_009216511.1 | NC_028987_p16 | hypothetical protein | phrog_2827 | unknown function | unknown function | 1 | 6381 | 6605 |
| YP_009216527.1 | NC_028987_p32 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 18235 | 18885 |
| YP_009216494.1 | NC_028987_p51 | hypothetical protein | phrog_8403 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40858 | 40995 |
| YP_009216497.1 | NC_028987_p2 | hypothetical protein | phrog_2827 | unknown function | unknown function | 1 | 1554 | 2024 |
| YP_009216492.1 | NC_028987_p49 | hypothetical protein | phrog_891 | terminase small subunit | head and packaging | 1 | 38606 | 38914 |
| YP_009216508.1 | NC_028987_p13 | hypothetical protein | phrog_7079 | unknown function | unknown function | 1 | 5831 | 5998 |
| YP_009216493.1 | NC_028987_p50 | DNA maturase B | phrog_38 | terminase large subunit | head and packaging | 1 | 38924 | 40861 |
| YP_009216491.1 | NC_028987_p48 | endolysin | phrog_181 | endolysin | lysis | 1 | 37988 | 38545 |
| YP_009216531.1 | NC_028987_p36 | head-tail connector protein | phrog_449 | head-tail adaptor | connector | 1 | 21871 | 23427 |
| YP_009268877.1 | NC_028987_p8 | hypothetical protein | phrog_38792 | unknown function | unknown function | 1 | 3971 | 4150 |
| YP_009216519.1 | NC_028987_p24 | hypothetical protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 13534 | 13956 |
| YP_009216517.1 | NC_028987_p22 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 10002 | 10979 |
| YP_009216537.1 | NC_028987_p42 | tail tubular protein B | phrog_457 | tail protein | tail | 1 | 26597 | 28888 |
| YP_009216488.1 | NC_028987_p45 | internal virion core protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 32467 | 35565 |
| YP_009216515.1 | NC_028987_p20 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 7967 | 9265 |
| YP_009216510.1 | NC_028987_p15 | hypothetical protein | phrog_2827 | unknown function | unknown function | 1 | 6173 | 6391 |
| YP_009216512.1 | NC_028987_p17 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 6595 | 7395 |
| YP_009216533.1 | NC_028987_p38 | capsid protein | phrog_267 | major head protein | head and packaging | 1 | 24312 | 25343 |
| YP_009216507.1 | NC_028987_p12 | hypothetical protein | phrog_7359 | unknown function | unknown function | 1 | 5383 | 5820 |
| YP_009216506.1 | NC_028987_p11 | hypothetical protein | phrog_6421 | unknown function | unknown function | 1 | 4881 | 5381 |
| YP_009216505.1 | NC_028987_p10 | hypothetical protein | phrog_6769 | unknown function | unknown function | 1 | 4405 | 4803 |
| YP_009268878.1 | NC_028987_p28 | DNA exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 15347 | 16300 |
| YP_009216496.1 | NC_028987_p1 | hypothetical protein | phrog_10124 | unknown function | unknown function | 1 | 916 | 1122 |
| YP_009216489.1 | NC_028987_p46 | tail fiber protein | phrog_3918 | tail fiber protein | tail | 1 | 35572 | 37653 |
| YP_009216538.1 | NC_028987_p43 | hypothetical protein | phrog_6056 | internal virion protein | head and packaging | 1 | 28888 | 29559 |