| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028991 |
Definition |
Clostridium phage phiCT453A, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae. |
DB of origin |
REFSEQ |
Length |
42158 |
Host Name |
Clostridium tetani |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
62 |
%GC |
29.45 |
Number of singletons |
11 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009216694.1 | NC_028991_p50 | xkdS-like protein | phrog_120 | baseplate wedge subunit | tail | 1 | 33274 | 33681 |
| YP_009216702.1 | NC_028991_p58 | hypothetical protein | phrog_24161 | unknown function | unknown function | 1 | 39675 | 39815 |
| YP_009216661.1 | NC_028991_p17 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 7954 | 8514 |
| YP_009216646.1 | NC_028991_p2 | hypothetical protein | phrog_15901 | unknown function | unknown function | -1 | 1564 | 1881 |
| YP_009216690.1 | NC_028991_p46 | tail-tape measure protein | phrog_1068 | tail length tape measure protein | tail | 1 | 29232 | 31235 |
| YP_009216699.1 | NC_028991_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37984 | 38169 |
| YP_009216674.1 | NC_028991_p30 | hypothetical protein | phrog_1233 | unknown function | unknown function | 1 | 20937 | 21347 |
| YP_009216679.1 | NC_028991_p35 | head-tail connector | phrog_132 | head-tail adaptor | connector | 1 | 23538 | 23897 |
| YP_009216693.1 | NC_028991_p49 | xkdR-like protein | phrog_579 | unknown function | unknown function | 1 | 32949 | 33272 |
| YP_009216662.1 | NC_028991_p18 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 8565 | 10538 |
| YP_009216664.1 | NC_028991_p20 | VRR-NUC domain-containing protein | singleton | unknown function | unknown function | 1 | 13339 | 13521 |
| YP_009216682.1 | NC_028991_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24700 | 24963 |
| YP_009216678.1 | NC_028991_p34 | coat protein | phrog_247 | major head protein | head and packaging | 1 | 22466 | 23533 |
| YP_009216705.1 | NC_028991_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40457 | 41260 |
| YP_009216645.1 | NC_028991_p1 | serine recombinase | phrog_95 | integrase | integration and excision | -1 | 33 | 1541 |
| YP_009216691.1 | NC_028991_p47 | LysM and cell-wall binding domain-containing protein | phrog_380 | endolysin | lysis | 1 | 31235 | 31909 |
| YP_009216700.1 | NC_028991_p56 | holin | phrog_199 | holin | lysis | 1 | 38310 | 38750 |
| YP_009216701.1 | NC_028991_p57 | N-acetylmuramoyl-L-alanine amidase | phrog_35436 | amidase | lysis | 1 | 38731 | 39531 |
| YP_009216695.1 | NC_028991_p51 | baseplate J protein | phrog_6 | baseplate wedge subunit | tail | 1 | 33684 | 34766 |
| YP_009216655.1 | NC_028991_p11 | hypothetical protein | phrog_16982 | unknown function | unknown function | 1 | 4876 | 5307 |
| YP_009216652.1 | NC_028991_p8 | hypothetical protein | phrog_8600 | unknown function | unknown function | -1 | 3764 | 4000 |
| YP_009216647.1 | NC_028991_p3 | hypothetical protein | phrog_5553 | unknown function | unknown function | -1 | 1900 | 2223 |
| YP_009216685.1 | NC_028991_p41 | xkdK-like tail sheath protein | phrog_279 | tail sheath | tail | 1 | 25605 | 26915 |
| YP_009216669.1 | NC_028991_p25 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 16017 | 17255 |
| YP_009216676.1 | NC_028991_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21470 | 21850 |
| YP_009216684.1 | NC_028991_p40 | hypothetical protein | phrog_966 | unknown function | unknown function | 1 | 25440 | 25604 |
| YP_009216703.1 | NC_028991_p59 | hypothetical protein | phrog_26544 | unknown function | unknown function | 1 | 39854 | 40009 |
| YP_009216677.1 | NC_028991_p33 | minor structural protein | phrog_194 | head scaffolding protein | head and packaging | 1 | 21865 | 22443 |
| YP_009216688.1 | NC_028991_p44 | hypothetical protein | phrog_31229 | unknown function | unknown function | 1 | 28118 | 28501 |
| YP_009216665.1 | NC_028991_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13537 | 13659 |
| YP_009216650.1 | NC_028991_p6 | XRE family transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 3344 | 3559 |
| YP_009216672.1 | NC_028991_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20323 | 20670 |
| YP_009216697.1 | NC_028991_p53 | tail fiber protein | phrog_1780 | tail collar fiber protein | tail | 1 | 35384 | 37549 |
| YP_009216675.1 | NC_028991_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21348 | 21503 |
| YP_009216651.1 | NC_028991_p7 | hypothetical protein | phrog_22801 | unknown function | unknown function | 1 | 3580 | 3759 |
| YP_009216683.1 | NC_028991_p39 | hypothetical protein | phrog_525 | unknown function | unknown function | 1 | 25058 | 25459 |
| YP_009216686.1 | NC_028991_p42 | xkdM-like portal protein | phrog_365 | tail protein | tail | 1 | 26931 | 27395 |
| YP_009216653.1 | NC_028991_p9 | hypothetical protein | phrog_15040 | unknown function | unknown function | -1 | 4085 | 4501 |
| YP_009216680.1 | NC_028991_p36 | hypothetical protein | phrog_615 | head-tail adaptor | connector | 1 | 23899 | 24282 |
| YP_009216656.1 | NC_028991_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5390 | 5743 |
| YP_009216692.1 | NC_028991_p48 | cell wall hydrolase | phrog_400 | tail protein | tail | 1 | 31920 | 32948 |
| YP_009216668.1 | NC_028991_p24 | transposase/terminase small subunit | phrog_309 | terminase small subunit | head and packaging | 1 | 15533 | 16027 |
| YP_009216649.1 | NC_028991_p5 | Cro/Cl-type repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2725 | 3180 |
| YP_009216681.1 | NC_028991_p37 | tail protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 24282 | 24695 |
| YP_009216673.1 | NC_028991_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20735 | 20920 |
| YP_009216667.1 | NC_028991_p23 | ArpU family transcriptional regulator | phrog_248 | transcriptional activator | transcription regulation | 1 | 14948 | 15331 |
| YP_009216704.1 | NC_028991_p60 | hypothetical protein | phrog_2277 | unknown function | unknown function | 1 | 39987 | 40178 |
| YP_009216696.1 | NC_028991_p52 | xkdU-like tail protein | phrog_521 | tail protein | tail | 1 | 34759 | 35382 |
| YP_009216671.1 | NC_028991_p27 | head morphogenesis protein | phrog_115 | minor head protein | head and packaging | 1 | 18696 | 20309 |
| YP_009216666.1 | NC_028991_p22 | DEAD/DEAH box helicase and SNF2 domain-containing protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 14167 | 14955 |
| YP_009216689.1 | NC_028991_p45 | hypothetical protein | phrog_806 | unknown function | unknown function | 1 | 28585 | 29178 |
| YP_009216657.1 | NC_028991_p13 | hypothetical protein | phrog_20007 | unknown function | unknown function | 1 | 5764 | 6015 |
| YP_009216663.1 | NC_028991_p19 | virulence-associated E domain-containing protein | phrog_256 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 10550 | 12976 |
| YP_009216659.1 | NC_028991_p15 | hypothetical protein | phrog_38276 | unknown function | unknown function | 1 | 6308 | 6784 |
| YP_009216698.1 | NC_028991_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37567 | 37983 |
| YP_009216648.1 | NC_028991_p4 | hypothetical protein | phrog_87 | metallo-protease | other | -1 | 2251 | 2709 |
| YP_009216706.1 | NC_028991_p62 | hypothetical protein | phrog_17119 | unknown function | unknown function | 1 | 41405 | 41980 |
| YP_009216670.1 | NC_028991_p26 | SPP1 family portal protein | phrog_64 | portal protein | head and packaging | 1 | 17267 | 18706 |
| YP_009216687.1 | NC_028991_p43 | xkdN-like protein | phrog_389 | tail protein XkdN-like | tail | 1 | 27411 | 27821 |
| YP_009216654.1 | NC_028991_p10 | hypothetical protein | phrog_15837 | unknown function | unknown function | 1 | 4584 | 4718 |
| YP_009216658.1 | NC_028991_p14 | hypothetical protein | phrog_33958 | unknown function | unknown function | 1 | 6015 | 6275 |
| YP_009216660.1 | NC_028991_p16 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 6784 | 7929 |