Genomic map of Clostridium phage phiCT453A (NC_028991)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028991
Definition
Clostridium phage phiCT453A, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
DB of origin
REFSEQ
Length
42158
Host Name
Clostridium tetani
Host domain
Bacteria
Is prophage?
undef
Number of proteins
62
%GC
29.45
Number of singletons
11
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009216694.1 NC_028991_p50 xkdS-like protein phrog_120 baseplate wedge subunit tail 1 33274 33681
YP_009216702.1 NC_028991_p58 hypothetical protein phrog_24161 unknown function unknown function 1 39675 39815
YP_009216661.1 NC_028991_p17 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 7954 8514
YP_009216646.1 NC_028991_p2 hypothetical protein phrog_15901 unknown function unknown function -1 1564 1881
YP_009216690.1 NC_028991_p46 tail-tape measure protein phrog_1068 tail length tape measure protein tail 1 29232 31235
YP_009216699.1 NC_028991_p55 hypothetical protein singleton unknown function unknown function 1 37984 38169
YP_009216674.1 NC_028991_p30 hypothetical protein phrog_1233 unknown function unknown function 1 20937 21347
YP_009216679.1 NC_028991_p35 head-tail connector phrog_132 head-tail adaptor connector 1 23538 23897
YP_009216693.1 NC_028991_p49 xkdR-like protein phrog_579 unknown function unknown function 1 32949 33272
YP_009216662.1 NC_028991_p18 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 8565 10538
YP_009216664.1 NC_028991_p20 VRR-NUC domain-containing protein singleton unknown function unknown function 1 13339 13521
YP_009216682.1 NC_028991_p38 hypothetical protein singleton unknown function unknown function 1 24700 24963
YP_009216678.1 NC_028991_p34 coat protein phrog_247 major head protein head and packaging 1 22466 23533
YP_009216705.1 NC_028991_p61 hypothetical protein singleton unknown function unknown function 1 40457 41260
YP_009216645.1 NC_028991_p1 serine recombinase phrog_95 integrase integration and excision -1 33 1541
YP_009216691.1 NC_028991_p47 LysM and cell-wall binding domain-containing protein phrog_380 endolysin lysis 1 31235 31909
YP_009216700.1 NC_028991_p56 holin phrog_199 holin lysis 1 38310 38750
YP_009216701.1 NC_028991_p57 N-acetylmuramoyl-L-alanine amidase phrog_35436 amidase lysis 1 38731 39531
YP_009216695.1 NC_028991_p51 baseplate J protein phrog_6 baseplate wedge subunit tail 1 33684 34766
YP_009216655.1 NC_028991_p11 hypothetical protein phrog_16982 unknown function unknown function 1 4876 5307
YP_009216652.1 NC_028991_p8 hypothetical protein phrog_8600 unknown function unknown function -1 3764 4000
YP_009216647.1 NC_028991_p3 hypothetical protein phrog_5553 unknown function unknown function -1 1900 2223
YP_009216685.1 NC_028991_p41 xkdK-like tail sheath protein phrog_279 tail sheath tail 1 25605 26915
YP_009216669.1 NC_028991_p25 terminase large subunit phrog_2 terminase large subunit head and packaging 1 16017 17255
YP_009216676.1 NC_028991_p32 hypothetical protein singleton unknown function unknown function 1 21470 21850
YP_009216684.1 NC_028991_p40 hypothetical protein phrog_966 unknown function unknown function 1 25440 25604
YP_009216703.1 NC_028991_p59 hypothetical protein phrog_26544 unknown function unknown function 1 39854 40009
YP_009216677.1 NC_028991_p33 minor structural protein phrog_194 head scaffolding protein head and packaging 1 21865 22443
YP_009216688.1 NC_028991_p44 hypothetical protein phrog_31229 unknown function unknown function 1 28118 28501
YP_009216665.1 NC_028991_p21 hypothetical protein singleton unknown function unknown function 1 13537 13659
YP_009216650.1 NC_028991_p6 XRE family transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 3344 3559
YP_009216672.1 NC_028991_p28 hypothetical protein singleton unknown function unknown function 1 20323 20670
YP_009216697.1 NC_028991_p53 tail fiber protein phrog_1780 tail collar fiber protein tail 1 35384 37549
YP_009216675.1 NC_028991_p31 hypothetical protein singleton unknown function unknown function 1 21348 21503
YP_009216651.1 NC_028991_p7 hypothetical protein phrog_22801 unknown function unknown function 1 3580 3759
YP_009216683.1 NC_028991_p39 hypothetical protein phrog_525 unknown function unknown function 1 25058 25459
YP_009216686.1 NC_028991_p42 xkdM-like portal protein phrog_365 tail protein tail 1 26931 27395
YP_009216653.1 NC_028991_p9 hypothetical protein phrog_15040 unknown function unknown function -1 4085 4501
YP_009216680.1 NC_028991_p36 hypothetical protein phrog_615 head-tail adaptor connector 1 23899 24282
YP_009216656.1 NC_028991_p12 hypothetical protein singleton unknown function unknown function 1 5390 5743
YP_009216692.1 NC_028991_p48 cell wall hydrolase phrog_400 tail protein tail 1 31920 32948
YP_009216668.1 NC_028991_p24 transposase/terminase small subunit phrog_309 terminase small subunit head and packaging 1 15533 16027
YP_009216649.1 NC_028991_p5 Cro/Cl-type repressor phrog_8 transcriptional regulator transcription regulation -1 2725 3180
YP_009216681.1 NC_028991_p37 tail protein phrog_5 tail completion or Neck1 protein connector 1 24282 24695
YP_009216673.1 NC_028991_p29 hypothetical protein singleton unknown function unknown function 1 20735 20920
YP_009216667.1 NC_028991_p23 ArpU family transcriptional regulator phrog_248 transcriptional activator transcription regulation 1 14948 15331
YP_009216704.1 NC_028991_p60 hypothetical protein phrog_2277 unknown function unknown function 1 39987 40178
YP_009216696.1 NC_028991_p52 xkdU-like tail protein phrog_521 tail protein tail 1 34759 35382
YP_009216671.1 NC_028991_p27 head morphogenesis protein phrog_115 minor head protein head and packaging 1 18696 20309
YP_009216666.1 NC_028991_p22 DEAD/DEAH box helicase and SNF2 domain-containing protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 14167 14955
YP_009216689.1 NC_028991_p45 hypothetical protein phrog_806 unknown function unknown function 1 28585 29178
YP_009216657.1 NC_028991_p13 hypothetical protein phrog_20007 unknown function unknown function 1 5764 6015
YP_009216663.1 NC_028991_p19 virulence-associated E domain-containing protein phrog_256 DNA helicase DNA, RNA and nucleotide metabolism 1 10550 12976
YP_009216659.1 NC_028991_p15 hypothetical protein phrog_38276 unknown function unknown function 1 6308 6784
YP_009216698.1 NC_028991_p54 hypothetical protein singleton unknown function unknown function 1 37567 37983
YP_009216648.1 NC_028991_p4 hypothetical protein phrog_87 metallo-protease other -1 2251 2709
YP_009216706.1 NC_028991_p62 hypothetical protein phrog_17119 unknown function unknown function 1 41405 41980
YP_009216670.1 NC_028991_p26 SPP1 family portal protein phrog_64 portal protein head and packaging 1 17267 18706
YP_009216687.1 NC_028991_p43 xkdN-like protein phrog_389 tail protein XkdN-like tail 1 27411 27821
YP_009216654.1 NC_028991_p10 hypothetical protein phrog_15837 unknown function unknown function 1 4584 4718
YP_009216658.1 NC_028991_p14 hypothetical protein phrog_33958 unknown function unknown function 1 6015 6275
YP_009216660.1 NC_028991_p16 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 6784 7929