Genomic map of Sulfolobales Virus YNP2 (NC_028992)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_028992
Definition
Sulfolobales Virus YNP2 strain SYV2, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; unclassified viruses; unclassified DNA viruses; unclassified archaeal dsDNA viruses.
DB of origin
REFSEQ
Length
34783
Host Name
Sulfolobales
Host domain
Archaea
Is prophage?
undef
Number of proteins
60
%GC
42.65
Number of singletons
22
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009216758.1 NC_028992_p52 hypothetical protein phrog_7928 unknown function unknown function -1 30802 31020
YP_009216740.1 NC_028992_p34 hypothetical protein singleton unknown function unknown function 1 22344 22544
YP_009216755.1 NC_028992_p49 Modification methylase MjaI phrog_6025 DNA methyltransferase other -1 29170 29610
YP_009216722.1 NC_028992_p16 hypothetical protein singleton unknown function unknown function -1 7494 7910
YP_009216725.1 NC_028992_p19 hypothetical protein phrog_8969 unknown function unknown function -1 8992 11919
YP_009216764.1 NC_028992_p58 hypothetical protein singleton unknown function unknown function -1 33495 33632
YP_009216738.1 NC_028992_p32 Dolichol-phosphate mannosyltransferase homolog phrog_33613 unknown function unknown function 1 21523 21960
YP_009216737.1 NC_028992_p31 Dolichol-phosphate mannosyltransferase homolog phrog_841 GtrB-like O-antigen conversion moron, auxiliary metabolic gene and host takeover 1 20811 21509
YP_009216709.1 NC_028992_p3 hypothetical protein phrog_32791 unknown function unknown function 1 835 1101
YP_009216765.1 NC_028992_p59 hypothetical protein phrog_35756 unknown function unknown function 1 33813 34238
YP_009216731.1 NC_028992_p25 hypothetical protein singleton unknown function unknown function -1 13998 14270
YP_009216749.1 NC_028992_p43 hypothetical protein phrog_18276 unknown function unknown function -1 25424 25795
YP_009216710.1 NC_028992_p4 hypothetical protein phrog_30910 unknown function unknown function -1 1098 1490
YP_009216752.1 NC_028992_p46 hypothetical protein phrog_23211 unknown function unknown function -1 26960 27727
YP_009216713.1 NC_028992_p7 hypothetical protein phrog_32973 unknown function unknown function -1 2544 3122
YP_009216761.1 NC_028992_p55 hypothetical protein phrog_13045 unknown function unknown function 1 31974 32240
YP_009216734.1 NC_028992_p28 Uncharacterized protein MJ0770 phrog_9208 integrase integration and excision 1 18645 19373
YP_009216728.1 NC_028992_p22 hypothetical protein phrog_32747 unknown function unknown function -1 13041 13220
YP_009216739.1 NC_028992_p33 hypothetical protein phrog_36495 unknown function unknown function 1 22194 22340
YP_009216736.1 NC_028992_p30 hypothetical protein singleton unknown function unknown function -1 20110 20577
YP_009216708.1 NC_028992_p2 hypothetical protein phrog_38434 unknown function unknown function 1 577 765
YP_009216724.1 NC_028992_p18 hypothetical protein phrog_35087 unknown function unknown function -1 8726 8995
YP_009216759.1 NC_028992_p53 hypothetical protein singleton unknown function unknown function -1 31017 31382
YP_009216714.1 NC_028992_p8 hypothetical protein phrog_29389 unknown function unknown function -1 3128 3331
YP_009216726.1 NC_028992_p20 polynucleotide kinase/phosphatase phrog_415 polynucleotide kinase other -1 11993 12577
YP_009216753.1 NC_028992_p47 hypothetical protein phrog_363 DNA methyltransferase other -1 27902 28630
YP_009216766.1 NC_028992_p60 HTH-type transcriptional regulator lrs14 singleton transcriptional regulator transcription regulation 1 34263 34679
YP_009216763.1 NC_028992_p57 hypothetical protein singleton unknown function unknown function -1 33134 33493
YP_009216743.1 NC_028992_p37 hypothetical protein phrog_5484 DnaA-like replication initiation protein DNA, RNA and nucleotide metabolism -1 23082 23792
YP_009216757.1 NC_028992_p51 hypothetical protein phrog_876 transcriptional repressor transcription regulation -1 30641 30805
YP_009216729.1 NC_028992_p23 hypothetical protein phrog_28243 unknown function unknown function -1 13222 13383
YP_009216723.1 NC_028992_p17 hypothetical protein phrog_31664 unknown function unknown function -1 8056 8685
YP_009216735.1 NC_028992_p29 hypothetical protein singleton unknown function unknown function -1 19397 19864
YP_009216711.1 NC_028992_p5 hypothetical protein phrog_34851 unknown function unknown function -1 1554 1988
YP_009216748.1 NC_028992_p42 hypothetical protein singleton unknown function unknown function -1 25036 25383
YP_009216730.1 NC_028992_p24 hypothetical protein singleton unknown function unknown function -1 13444 13920
YP_009216732.1 NC_028992_p26 NAD-independent protein deacetylase AcuC singleton NAD-independent protein deacetylase other -1 14284 18132
YP_009216721.1 NC_028992_p15 hypothetical protein singleton unknown function unknown function -1 7265 7519
YP_009216760.1 NC_028992_p54 hypothetical protein singleton unknown function unknown function -1 31467 31772
YP_009216754.1 NC_028992_p48 Modification methylase MjaI singleton unknown function unknown function -1 28668 29159
YP_009216716.1 NC_028992_p10 hypothetical protein phrog_31595 unknown function unknown function -1 3595 3936
YP_009216733.1 NC_028992_p27 hypothetical protein phrog_36219 unknown function unknown function -1 18138 18371
YP_009216756.1 NC_028992_p50 Zinc finger, TFIIB-type domain protein phrog_20431 unknown function unknown function -1 29607 30629
YP_009216715.1 NC_028992_p9 hypothetical protein phrog_35242 unknown function unknown function 1 3391 3606
YP_009216747.1 NC_028992_p41 hypothetical protein phrog_32612 unknown function unknown function -1 24653 25039
YP_009216712.1 NC_028992_p6 hypothetical protein singleton unknown function unknown function -1 1957 2559
YP_009216762.1 NC_028992_p56 hypothetical protein singleton unknown function unknown function -1 32839 33147
YP_009216742.1 NC_028992_p36 hypothetical protein singleton unknown function unknown function -1 22787 23089
YP_009216741.1 NC_028992_p35 hypothetical protein singleton unknown function unknown function -1 22555 22821
YP_009216718.1 NC_028992_p12 hypothetical protein phrog_16502 unknown function unknown function -1 4245 4952
YP_009216750.1 NC_028992_p44 hypothetical protein singleton unknown function unknown function -1 25886 26293
YP_009216751.1 NC_028992_p45 hypothetical protein singleton unknown function unknown function -1 26290 26895
YP_009216719.1 NC_028992_p13 Protein-export membrane protein SecF phrog_21437 membrane protein moron, auxiliary metabolic gene and host takeover -1 4924 5877
YP_009216720.1 NC_028992_p14 Cell division protein FtsH phrog_9172 unknown function unknown function -1 5961 7268
YP_009216744.1 NC_028992_p38 hypothetical protein phrog_31845 unknown function unknown function -1 23821 24018
YP_009216745.1 NC_028992_p39 hypothetical protein phrog_29379 unknown function unknown function -1 24022 24303
YP_009216746.1 NC_028992_p40 hypothetical protein singleton unknown function unknown function -1 24297 24668
YP_009216707.1 NC_028992_p1 hypothetical protein phrog_16261 virion structural protein head and packaging 1 1 426
YP_009216727.1 NC_028992_p21 hypothetical protein phrog_36287 unknown function unknown function -1 12617 13006
YP_009216717.1 NC_028992_p11 hypothetical protein phrog_33209 unknown function unknown function -1 3926 4255