| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028992 |
Definition |
Sulfolobales Virus YNP2 strain SYV2, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; unclassified viruses; unclassified DNA viruses; unclassified archaeal dsDNA viruses. |
DB of origin |
REFSEQ |
Length |
34783 |
Host Name |
Sulfolobales |
Host domain |
Archaea |
Is prophage? |
undef |
Number of proteins |
60 |
%GC |
42.65 |
Number of singletons |
22 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009216758.1 | NC_028992_p52 | hypothetical protein | phrog_7928 | unknown function | unknown function | -1 | 30802 | 31020 |
| YP_009216740.1 | NC_028992_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22344 | 22544 |
| YP_009216755.1 | NC_028992_p49 | Modification methylase MjaI | phrog_6025 | DNA methyltransferase | other | -1 | 29170 | 29610 |
| YP_009216722.1 | NC_028992_p16 | hypothetical protein | singleton | unknown function | unknown function | -1 | 7494 | 7910 |
| YP_009216725.1 | NC_028992_p19 | hypothetical protein | phrog_8969 | unknown function | unknown function | -1 | 8992 | 11919 |
| YP_009216764.1 | NC_028992_p58 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33495 | 33632 |
| YP_009216738.1 | NC_028992_p32 | Dolichol-phosphate mannosyltransferase homolog | phrog_33613 | unknown function | unknown function | 1 | 21523 | 21960 |
| YP_009216737.1 | NC_028992_p31 | Dolichol-phosphate mannosyltransferase homolog | phrog_841 | GtrB-like O-antigen conversion | moron, auxiliary metabolic gene and host takeover | 1 | 20811 | 21509 |
| YP_009216709.1 | NC_028992_p3 | hypothetical protein | phrog_32791 | unknown function | unknown function | 1 | 835 | 1101 |
| YP_009216765.1 | NC_028992_p59 | hypothetical protein | phrog_35756 | unknown function | unknown function | 1 | 33813 | 34238 |
| YP_009216731.1 | NC_028992_p25 | hypothetical protein | singleton | unknown function | unknown function | -1 | 13998 | 14270 |
| YP_009216749.1 | NC_028992_p43 | hypothetical protein | phrog_18276 | unknown function | unknown function | -1 | 25424 | 25795 |
| YP_009216710.1 | NC_028992_p4 | hypothetical protein | phrog_30910 | unknown function | unknown function | -1 | 1098 | 1490 |
| YP_009216752.1 | NC_028992_p46 | hypothetical protein | phrog_23211 | unknown function | unknown function | -1 | 26960 | 27727 |
| YP_009216713.1 | NC_028992_p7 | hypothetical protein | phrog_32973 | unknown function | unknown function | -1 | 2544 | 3122 |
| YP_009216761.1 | NC_028992_p55 | hypothetical protein | phrog_13045 | unknown function | unknown function | 1 | 31974 | 32240 |
| YP_009216734.1 | NC_028992_p28 | Uncharacterized protein MJ0770 | phrog_9208 | integrase | integration and excision | 1 | 18645 | 19373 |
| YP_009216728.1 | NC_028992_p22 | hypothetical protein | phrog_32747 | unknown function | unknown function | -1 | 13041 | 13220 |
| YP_009216739.1 | NC_028992_p33 | hypothetical protein | phrog_36495 | unknown function | unknown function | 1 | 22194 | 22340 |
| YP_009216736.1 | NC_028992_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 20110 | 20577 |
| YP_009216708.1 | NC_028992_p2 | hypothetical protein | phrog_38434 | unknown function | unknown function | 1 | 577 | 765 |
| YP_009216724.1 | NC_028992_p18 | hypothetical protein | phrog_35087 | unknown function | unknown function | -1 | 8726 | 8995 |
| YP_009216759.1 | NC_028992_p53 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31017 | 31382 |
| YP_009216714.1 | NC_028992_p8 | hypothetical protein | phrog_29389 | unknown function | unknown function | -1 | 3128 | 3331 |
| YP_009216726.1 | NC_028992_p20 | polynucleotide kinase/phosphatase | phrog_415 | polynucleotide kinase | other | -1 | 11993 | 12577 |
| YP_009216753.1 | NC_028992_p47 | hypothetical protein | phrog_363 | DNA methyltransferase | other | -1 | 27902 | 28630 |
| YP_009216766.1 | NC_028992_p60 | HTH-type transcriptional regulator lrs14 | singleton | transcriptional regulator | transcription regulation | 1 | 34263 | 34679 |
| YP_009216763.1 | NC_028992_p57 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33134 | 33493 |
| YP_009216743.1 | NC_028992_p37 | hypothetical protein | phrog_5484 | DnaA-like replication initiation protein | DNA, RNA and nucleotide metabolism | -1 | 23082 | 23792 |
| YP_009216757.1 | NC_028992_p51 | hypothetical protein | phrog_876 | transcriptional repressor | transcription regulation | -1 | 30641 | 30805 |
| YP_009216729.1 | NC_028992_p23 | hypothetical protein | phrog_28243 | unknown function | unknown function | -1 | 13222 | 13383 |
| YP_009216723.1 | NC_028992_p17 | hypothetical protein | phrog_31664 | unknown function | unknown function | -1 | 8056 | 8685 |
| YP_009216735.1 | NC_028992_p29 | hypothetical protein | singleton | unknown function | unknown function | -1 | 19397 | 19864 |
| YP_009216711.1 | NC_028992_p5 | hypothetical protein | phrog_34851 | unknown function | unknown function | -1 | 1554 | 1988 |
| YP_009216748.1 | NC_028992_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 25036 | 25383 |
| YP_009216730.1 | NC_028992_p24 | hypothetical protein | singleton | unknown function | unknown function | -1 | 13444 | 13920 |
| YP_009216732.1 | NC_028992_p26 | NAD-independent protein deacetylase AcuC | singleton | NAD-independent protein deacetylase | other | -1 | 14284 | 18132 |
| YP_009216721.1 | NC_028992_p15 | hypothetical protein | singleton | unknown function | unknown function | -1 | 7265 | 7519 |
| YP_009216760.1 | NC_028992_p54 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31467 | 31772 |
| YP_009216754.1 | NC_028992_p48 | Modification methylase MjaI | singleton | unknown function | unknown function | -1 | 28668 | 29159 |
| YP_009216716.1 | NC_028992_p10 | hypothetical protein | phrog_31595 | unknown function | unknown function | -1 | 3595 | 3936 |
| YP_009216733.1 | NC_028992_p27 | hypothetical protein | phrog_36219 | unknown function | unknown function | -1 | 18138 | 18371 |
| YP_009216756.1 | NC_028992_p50 | Zinc finger, TFIIB-type domain protein | phrog_20431 | unknown function | unknown function | -1 | 29607 | 30629 |
| YP_009216715.1 | NC_028992_p9 | hypothetical protein | phrog_35242 | unknown function | unknown function | 1 | 3391 | 3606 |
| YP_009216747.1 | NC_028992_p41 | hypothetical protein | phrog_32612 | unknown function | unknown function | -1 | 24653 | 25039 |
| YP_009216712.1 | NC_028992_p6 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1957 | 2559 |
| YP_009216762.1 | NC_028992_p56 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32839 | 33147 |
| YP_009216742.1 | NC_028992_p36 | hypothetical protein | singleton | unknown function | unknown function | -1 | 22787 | 23089 |
| YP_009216741.1 | NC_028992_p35 | hypothetical protein | singleton | unknown function | unknown function | -1 | 22555 | 22821 |
| YP_009216718.1 | NC_028992_p12 | hypothetical protein | phrog_16502 | unknown function | unknown function | -1 | 4245 | 4952 |
| YP_009216750.1 | NC_028992_p44 | hypothetical protein | singleton | unknown function | unknown function | -1 | 25886 | 26293 |
| YP_009216751.1 | NC_028992_p45 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26290 | 26895 |
| YP_009216719.1 | NC_028992_p13 | Protein-export membrane protein SecF | phrog_21437 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 4924 | 5877 |
| YP_009216720.1 | NC_028992_p14 | Cell division protein FtsH | phrog_9172 | unknown function | unknown function | -1 | 5961 | 7268 |
| YP_009216744.1 | NC_028992_p38 | hypothetical protein | phrog_31845 | unknown function | unknown function | -1 | 23821 | 24018 |
| YP_009216745.1 | NC_028992_p39 | hypothetical protein | phrog_29379 | unknown function | unknown function | -1 | 24022 | 24303 |
| YP_009216746.1 | NC_028992_p40 | hypothetical protein | singleton | unknown function | unknown function | -1 | 24297 | 24668 |
| YP_009216707.1 | NC_028992_p1 | hypothetical protein | phrog_16261 | virion structural protein | head and packaging | 1 | 1 | 426 |
| YP_009216727.1 | NC_028992_p21 | hypothetical protein | phrog_36287 | unknown function | unknown function | -1 | 12617 | 13006 |
| YP_009216717.1 | NC_028992_p11 | hypothetical protein | phrog_33209 | unknown function | unknown function | -1 | 3926 | 4255 |