| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_028997 |
Definition |
Enterobacteria phage JenP2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nonagvirus. |
DB of origin |
REFSEQ |
Length |
59802 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
87 |
%GC |
43.21 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009217025.1 | NC_028997_p87 | hypothetical protein | phrog_16688 | unknown function | unknown function | 1 | 59437 | 59673 |
| YP_009217000.1 | NC_028997_p62 | hypothetical protein | phrog_5321 | unknown function | unknown function | -1 | 49063 | 49332 |
| YP_009216962.1 | NC_028997_p24 | hypothetical protein | phrog_1361 | unknown function | unknown function | 1 | 21903 | 22181 |
| YP_009217006.1 | NC_028997_p68 | hypothetical protein | phrog_18014 | unknown function | unknown function | -1 | 50881 | 51501 |
| YP_009216992.1 | NC_028997_p54 | hypothetical protein | phrog_18974 | unknown function | unknown function | -1 | 44473 | 44697 |
| YP_009216986.1 | NC_028997_p48 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | -1 | 42411 | 42920 |
| YP_009217021.1 | NC_028997_p83 | hypothetical protein | phrog_19774 | unknown function | unknown function | 1 | 57846 | 58073 |
| YP_009216989.1 | NC_028997_p51 | hypothetical protein | phrog_20894 | unknown function | unknown function | -1 | 43717 | 43992 |
| YP_009217014.1 | NC_028997_p76 | hypothetical protein | phrog_21392 | unknown function | unknown function | 1 | 55297 | 55584 |
| YP_009216972.1 | NC_028997_p34 | 6-carboxytetrahydropterin synthase | phrog_2389 | QueD-like 6-pyruvoyl-tetrahydropterin synthase | moron, auxiliary metabolic gene and host takeover | -1 | 30082 | 30615 |
| YP_009216950.1 | NC_028997_p12 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 8778 | 9245 |
| YP_009216966.1 | NC_028997_p28 | hypothetical protein | phrog_8329 | unknown function | unknown function | 1 | 24548 | 25096 |
| YP_009216998.1 | NC_028997_p60 | hypothetical protein | phrog_19703 | unknown function | unknown function | -1 | 48339 | 48575 |
| YP_009217009.1 | NC_028997_p71 | hypothetical protein | phrog_18706 | unknown function | unknown function | -1 | 53140 | 53304 |
| YP_009216997.1 | NC_028997_p59 | DNA primase/helicase | phrog_3022 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 45780 | 48329 |
| YP_009216944.1 | NC_028997_p6 | hypothetical protein | phrog_18016 | unknown function | unknown function | 1 | 5967 | 6401 |
| YP_009216948.1 | NC_028997_p10 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 7988 | 8362 |
| YP_009217022.1 | NC_028997_p84 | lysin | phrog_312 | Rz-like spanin | lysis | 1 | 58079 | 58555 |
| YP_009216984.1 | NC_028997_p46 | RNAse H | phrog_531 | Rnase H | DNA, RNA and nucleotide metabolism | -1 | 41319 | 41909 |
| YP_009217020.1 | NC_028997_p82 | hypothetical protein | phrog_12090 | unknown function | unknown function | 1 | 57658 | 57849 |
| YP_009216952.1 | NC_028997_p14 | hypothetical protein | phrog_569 | tail length tape measure protein | tail | 1 | 10470 | 10898 |
| YP_009216990.1 | NC_028997_p52 | hypothetical protein | phrog_11457 | unknown function | unknown function | -1 | 43989 | 44168 |
| YP_009216979.1 | NC_028997_p41 | helicase-like protein | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 35631 | 37634 |
| YP_009216963.1 | NC_028997_p25 | endosialidase-like protein | phrog_4563 | tail fiber protein | tail | 1 | 22191 | 23237 |
| YP_009217001.1 | NC_028997_p63 | hypothetical protein | phrog_18528 | unknown function | unknown function | -1 | 49335 | 49550 |
| YP_009216960.1 | NC_028997_p22 | hypothetical protein | phrog_557 | outer membrane protein | other | -1 | 19406 | 19687 |
| YP_009216993.1 | NC_028997_p55 | hypothetical protein | singleton | unknown function | unknown function | -1 | 44699 | 44920 |
| YP_009217017.1 | NC_028997_p79 | hypothetical protein | phrog_4049 | unknown function | unknown function | 1 | 56373 | 56813 |
| YP_009216961.1 | NC_028997_p23 | tail fiber protein | phrog_1419 | tail protein | tail | 1 | 19840 | 21906 |
| YP_009216956.1 | NC_028997_p18 | hypothetical protein | phrog_2048 | tail protein | tail | 1 | 15135 | 15719 |
| YP_009217013.1 | NC_028997_p75 | hypothetical protein | phrog_13865 | unknown function | unknown function | -1 | 54386 | 54691 |
| YP_009216939.1 | NC_028997_p1 | terminase small subunit | phrog_5334 | terminase small subunit | head and packaging | 1 | 1 | 552 |
| YP_009216949.1 | NC_028997_p11 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 8362 | 8781 |
| YP_009216996.1 | NC_028997_p58 | hypothetical protein | phrog_17131 | unknown function | unknown function | 1 | 45528 | 45752 |
| YP_009216943.1 | NC_028997_p5 | capsid protein | phrog_247 | major head protein | head and packaging | 1 | 4806 | 5909 |
| YP_009216957.1 | NC_028997_p19 | hypothetical protein | phrog_2134 | unknown function | unknown function | 1 | 15712 | 16128 |
| YP_009216965.1 | NC_028997_p27 | hypothetical protein | phrog_9157 | unknown function | unknown function | 1 | 24166 | 24531 |
| YP_009216947.1 | NC_028997_p9 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 7488 | 7991 |
| YP_009217007.1 | NC_028997_p69 | hypothetical protein | phrog_3199 | unknown function | unknown function | -1 | 52536 | 52784 |
| YP_009216958.1 | NC_028997_p20 | tail fiber protein | phrog_31 | central tail fiber J | tail | 1 | 16130 | 18754 |
| YP_009216953.1 | NC_028997_p15 | hypothetical protein | phrog_4966 | unknown function | unknown function | 1 | 10943 | 11281 |
| YP_009216976.1 | NC_028997_p38 | hypothetical protein | phrog_11298 | unknown function | unknown function | -1 | 33739 | 34563 |
| YP_009216981.1 | NC_028997_p43 | hypothetical protein | phrog_6015 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 38648 | 39577 |
| YP_009216959.1 | NC_028997_p21 | hypothetical protein | phrog_425 | membrane associated protein | moron, auxiliary metabolic gene and host takeover | -1 | 18789 | 19403 |
| YP_009216987.1 | NC_028997_p49 | hypothetical protein | phrog_1312 | unknown function | unknown function | -1 | 42913 | 43056 |
| YP_009216985.1 | NC_028997_p47 | hypothetical protein | phrog_2480 | unknown function | unknown function | -1 | 41910 | 42335 |
| YP_009216964.1 | NC_028997_p26 | hypothetical protein | phrog_9288 | unknown function | unknown function | 1 | 23390 | 24103 |
| YP_009216945.1 | NC_028997_p7 | hypothetical protein | phrog_10966 | unknown function | unknown function | 1 | 6471 | 7142 |
| YP_009216982.1 | NC_028997_p44 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 39577 | 40323 |
| YP_009216975.1 | NC_028997_p37 | queuosine Biosynthesis QueE Radical SAM | phrog_2076 | QueE-like radical SAM domain | moron, auxiliary metabolic gene and host takeover | -1 | 32906 | 33670 |
| YP_009216954.1 | NC_028997_p16 | tail length tape-measure protein 1 | phrog_339 | tail length tape measure protein | tail | 1 | 11281 | 14541 |
| YP_009216994.1 | NC_028997_p56 | hypothetical protein | phrog_9346 | unknown function | unknown function | -1 | 44936 | 45133 |
| YP_009217019.1 | NC_028997_p81 | hypothetical protein | phrog_1040 | peptidase HslV family | other | 1 | 57167 | 57661 |
| YP_009217005.1 | NC_028997_p67 | hypothetical protein | phrog_16944 | unknown function | unknown function | -1 | 50610 | 50879 |
| YP_009216970.1 | NC_028997_p32 | hypothetical protein | phrog_887 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | -1 | 28403 | 29356 |
| YP_009216988.1 | NC_028997_p50 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | -1 | 43069 | 43530 |
| YP_009216971.1 | NC_028997_p33 | GTP cyclohydrolase I / queuosine biosynthesis protein FolE | phrog_2197 | GTP cyclohydrolase | other | -1 | 29426 | 30055 |
| YP_009216967.1 | NC_028997_p29 | hypothetical protein | phrog_7239 | unknown function | unknown function | 1 | 25093 | 25362 |
| YP_009216940.1 | NC_028997_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 521 | 2119 |
| YP_009217018.1 | NC_028997_p80 | hypothetical protein | phrog_17085 | unknown function | unknown function | 1 | 56817 | 57170 |
| YP_009216977.1 | NC_028997_p39 | hypothetical protein | phrog_7864 | unknown function | unknown function | -1 | 34660 | 35382 |
| YP_009217016.1 | NC_028997_p78 | hypothetical protein | phrog_21152 | unknown function | unknown function | 1 | 56035 | 56373 |
| YP_009217012.1 | NC_028997_p74 | hypothetical protein | phrog_17772 | unknown function | unknown function | -1 | 53830 | 54309 |
| YP_009216973.1 | NC_028997_p35 | glutamine amidotransferases class-II (GATase) / queuosine biosynthesis QueC ATPase | phrog_10428 | L-glutamine-D-fructose-6-phosphate aminotransferase | other | -1 | 30618 | 32033 |
| YP_009217008.1 | NC_028997_p70 | hypothetical protein | phrog_13865 | unknown function | unknown function | -1 | 52814 | 53071 |
| YP_009216941.1 | NC_028997_p3 | structural protein | phrog_145 | portal protein | head and packaging | 1 | 2132 | 3658 |
| YP_009216955.1 | NC_028997_p17 | hypothetical protein | phrog_1302 | distal tail protein | tail | 1 | 14545 | 15135 |
| YP_009217011.1 | NC_028997_p73 | hypothetical protein | phrog_5461 | unknown function | unknown function | -1 | 53566 | 53751 |
| YP_009216968.1 | NC_028997_p30 | DNA polymerase B region | phrog_1252 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 25432 | 27405 |
| YP_009216999.1 | NC_028997_p61 | hypothetical protein | phrog_17122 | unknown function | unknown function | -1 | 48649 | 49047 |
| YP_009216995.1 | NC_028997_p57 | hypothetical protein | phrog_17339 | protease | other | -1 | 45151 | 45429 |
| YP_009217003.1 | NC_028997_p65 | hypothetical protein | phrog_17615 | unknown function | unknown function | -1 | 49919 | 50269 |
| YP_009216974.1 | NC_028997_p36 | hypothetical protein | phrog_18443 | unknown function | unknown function | -1 | 32035 | 32793 |
| YP_009216946.1 | NC_028997_p8 | hypothetical protein | phrog_17875 | unknown function | unknown function | 1 | 7151 | 7480 |
| YP_009216951.1 | NC_028997_p13 | phage tail subunit | phrog_290 | minor tail protein | tail | 1 | 9248 | 10429 |
| YP_009216942.1 | NC_028997_p4 | hypothetical protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 3789 | 4667 |
| YP_009217002.1 | NC_028997_p64 | hypothetical protein | phrog_1972 | unknown function | unknown function | -1 | 49543 | 49929 |
| YP_009217004.1 | NC_028997_p66 | hypothetical protein | phrog_14973 | unknown function | unknown function | -1 | 50269 | 50610 |
| YP_009217010.1 | NC_028997_p72 | hypothetical protein | phrog_3199 | unknown function | unknown function | -1 | 53315 | 53560 |
| YP_009216980.1 | NC_028997_p42 | hypothetical protein | phrog_1990 | Cas4-domain exonuclease | DNA, RNA and nucleotide metabolism | -1 | 37635 | 38585 |
| YP_009216983.1 | NC_028997_p45 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 40388 | 41332 |
| YP_009217024.1 | NC_028997_p86 | hypothetical protein | phrog_785 | holin | lysis | 1 | 59126 | 59434 |
| YP_009216969.1 | NC_028997_p31 | hypothetical protein | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | -1 | 27402 | 28394 |
| YP_009216991.1 | NC_028997_p53 | hypothetical protein | phrog_2993 | unknown function | unknown function | -1 | 44165 | 44473 |
| YP_009217015.1 | NC_028997_p77 | hypothetical protein | phrog_17838 | unknown function | unknown function | 1 | 55670 | 56035 |
| YP_009217023.1 | NC_028997_p85 | hypothetical protein | phrog_873 | endolysin | head and packaging | 1 | 58678 | 59112 |
| YP_009216978.1 | NC_028997_p40 | hypothetical protein | phrog_24889 | unknown function | unknown function | -1 | 35384 | 35623 |